EnhancerDB
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  3. vista49996[chr5:167122315-167122715]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista49996[chr5:167122315-167122715]
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Tissue distribution of vista49996
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Transcription factor that possibly regulate vista49996[chr5:167122315-167122715]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 167122362 167122377 SOX21 JASPAR yes 70754984
chr5 167122362 167122378 SOX4 JASPAR yes 70754985
chr5 167122383 167122387 TEAD2 TRANSFAC yes 70754986
chr5 167122385 167122398 POU2F2 JASPAR yes 70754987
chr5 167122410 167122424 TCF7L2 JASPAR yes 70754988
chr5 167122415 167122430 MEF2A JASPAR yes 70754989
chr5 167122416 167122431 MEF2C JASPAR yes 70754990
chr5 167122417 167122429 MEF2A JASPAR yes 70754991
chr5 167122417 167122429 MEF2B JASPAR yes 70754992
chr5 167122417 167122429 MEF2D JASPAR yes 70754993
chr5 167122418 167122428 MEF2A JASPAR yes 70754994
chr5 167122419 167122423 YY1 TRANSFAC yes 70754995
chr5 167122426 167122437 HOXA10 JASPAR yes 70754996
chr5 167122427 167122437 HOXD13 JASPAR yes 70754997
chr5 167122428 167122438 HOXA13 JASPAR yes 70754998
chr5 167122428 167122438 HOXB13 JASPAR yes 70754999
chr5 167122428 167122438 HOXD13 JASPAR yes 70755000
chr5 167122429 167122433 YY1 TRANSFAC yes 70755001
chr5 167122432 167122438 TBP TRANSFAC yes 70755002
chr5 167122432 167122443 FOXC1 JASPAR yes 70755003
chr5 167122440 167122444 TEAD2 TRANSFAC yes 70755004
chr5 167122440 167122445 TBP TRANSFAC yes 70755005
chr5 167122440 167122446 TFIID TRANSFAC yes 70755006
chr5 167122442 167122454 PROX1 JASPAR yes 70755007
chr5 167122455 167122458 MYB TRANSFAC yes 70755008
chr5 167122468 167122472 TEAD2 TRANSFAC yes 70755009
chr5 167122468 167122473 TBP TRANSFAC yes 70755010
chr5 167122468 167122474 TFIID TRANSFAC yes 70755011
chr5 167122468 167122479 FOXC1 JASPAR yes 70755012
chr5 167122468 167122480 FOXC2 JASPAR yes 70755013
chr5 167122471 167122480 SRY JASPAR yes 70755014
chr5 167122514 167122528 PLAG1 JASPAR yes 70755015
chr5 167122557 167122571 POU4F1 JASPAR yes 70755016
chr5 167122557 167122573 POU4F3 JASPAR yes 70755017
chr5 167122559 167122572 POU2F2 JASPAR yes 70755018
chr5 167122560 167122573 POU3F3 JASPAR yes 70755019
chr5 167122567 167122571 YY1 TRANSFAC yes 70755020
chr5 167122572 167122575 MYB TRANSFAC yes 70755021
chr5 167122574 167122589 PRDM1 JASPAR yes 70755022
chr5 167122577 167122595 RARA JASPAR yes 70755023
chr5 167122602 167122608 JUN TRANSFAC yes 70755024
chr5 167122607 167122622 MEF2C JASPAR yes 70755025
chr5 167122608 167122623 MEF2A JASPAR yes 70755026
chr5 167122609 167122621 MEF2B JASPAR yes 70755027
chr5 167122634 167122644 OLIG2 JASPAR yes 70755028
chr5 167122634 167122644 OLIG3 JASPAR yes 70755029
chr5 167122657 167122661 YY1 TRANSFAC yes 70755030
chr5 167122658 167122673 MEF2A JASPAR yes 70755031
chr5 167122659 167122674 MEF2C JASPAR yes 70755032
chr5 167122662 167122666 YY1 TRANSFAC yes 70755033
chr5 167122671 167122675 YY1 TRANSFAC yes 70755034
chr5 167122676 167122680 YY1 TRANSFAC yes 70755035
chr5 167122687 167122691 NFE TRANSFAC yes 70755036
chr5 167122687 167122692 GATA1 TRANSFAC yes 70755037
chr5 167122687 167122693 GATA3 JASPAR yes 70755038
SNP sites on vista49996[chr5:167122315-167122715]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 167122405 rs77059549 T G no 8674916
chr5 167122576 rs542388562 CAG C
PRDM1
8674917
chr5 167122587 rs193219973 G A,C,T
PRDM1 RARA
8674918
Genes possibly regulated by vista49996[chr5:167122315-167122715]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista49996[chr5:167122315-167122715]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr20 3898188 3898210 + hsa-miR-103a-3p MIMAT0000101 3870033 0.19406888827794166 0.73872 0.0 1035
Expression level of miRNAs
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