EnhancerDB
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  3. vista5000[chr1:212654863-212655019]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5000[chr1:212654863-212655019]
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Tissue distribution of vista5000
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Transcription factor that possibly regulate vista5000[chr1:212654863-212655019]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 212654848 212654867 PAX5 JASPAR yes 35128201
chr1 212654848 212654867 PAX5 JASPAR yes 118452813
chr1 212654866 212654871 ETS2 TRANSFAC yes 35128202
chr1 212654866 212654871 ETS2 TRANSFAC yes 118452814
chr1 212654867 212654885 NR3C1 JASPAR yes 35128203
chr1 212654867 212654885 NR3C1 JASPAR yes 118452815
chr1 212654882 212654888 NFIC JASPAR yes 35128204
chr1 212654882 212654888 NFIC JASPAR yes 118452816
chr1 212654884 212654899 FOXP1 JASPAR yes 35128205
chr1 212654884 212654899 FOXP1 JASPAR yes 118452817
chr1 212654884 212654905 IRF1 JASPAR yes 35128206
chr1 212654884 212654905 IRF1 JASPAR yes 118452818
chr1 212654886 212654898 FOXC2 JASPAR yes 35128207
chr1 212654886 212654898 FOXC2 JASPAR yes 118452819
chr1 212654887 212654901 IRF7 JASPAR yes 35128208
chr1 212654887 212654901 IRF7 JASPAR yes 118452820
chr1 212654888 212654903 PRDM1 JASPAR yes 35128209
chr1 212654888 212654903 STAT2 JASPAR yes 35128210
chr1 212654888 212654903 PRDM1 JASPAR yes 118452821
chr1 212654888 212654903 STAT2 JASPAR yes 118452822
chr1 212654889 212654901 IRF1 JASPAR yes 35128211
chr1 212654889 212654901 IRF1 JASPAR yes 118452823
chr1 212654901 212654921 ESR1 JASPAR yes 35128212
chr1 212654901 212654921 ESR1 JASPAR yes 118452824
chr1 212654904 212654922 ESR2 JASPAR yes 35128213
chr1 212654904 212654922 ESR2 JASPAR yes 118452825
chr1 212654905 212654923 ESR2 JASPAR yes 35128214
chr1 212654905 212654923 ESR2 JASPAR yes 118452826
chr1 212654906 212654921 ESR2 JASPAR yes 35128215
chr1 212654906 212654921 ESR2 JASPAR yes 118452827
chr1 212654906 212654924 MAFF JASPAR yes 35128216
chr1 212654906 212654924 MAFF JASPAR yes 118452828
chr1 212654906 212654926 ESR1 JASPAR yes 35128217
chr1 212654906 212654926 ESR1 JASPAR yes 118452829
chr1 212654908 212654919 NRL JASPAR yes 35128218
chr1 212654908 212654919 NRL JASPAR yes 118452830
chr1 212654908 212654923 MAFK JASPAR yes 35128219
chr1 212654908 212654923 MAFK JASPAR yes 118452831
chr1 212654908 212654929 MAFG JASPAR yes 35128220
chr1 212654908 212654929 MAFG JASPAR yes 118452832
chr1 212654914 212654935 IRF1 JASPAR yes 35128221
chr1 212654914 212654935 IRF1 JASPAR yes 118452833
chr1 212654915 212654930 STAT2 JASPAR yes 35128222
chr1 212654915 212654930 STAT2 JASPAR yes 118452834
chr1 212654918 212654930 IRF1 JASPAR yes 35128223
chr1 212654918 212654930 IRF1 JASPAR yes 118452835
chr1 212654918 212654932 IRF7 JASPAR yes 35128224
chr1 212654918 212654932 IRF7 JASPAR yes 118452836
chr1 212654919 212654940 ZNF263 JASPAR yes 35128225
chr1 212654919 212654940 ZNF263 JASPAR yes 118452837
chr1 212654923 212654927 YY1 TRANSFAC yes 35128226
chr1 212654923 212654927 YY1 TRANSFAC yes 118452838
chr1 212654927 212654941 SPIC JASPAR yes 35128227
chr1 212654927 212654941 SPIC JASPAR yes 118452839
chr1 212654930 212654937 SPIB JASPAR yes 35128228
chr1 212654930 212654937 SPIB JASPAR yes 118452840
chr1 212654940 212654950 NFATC3 JASPAR yes 35128229
chr1 212654940 212654950 NFATC3 JASPAR yes 118452841
chr1 212654942 212654949 NFATC2 JASPAR yes 35128230
chr1 212654942 212654949 NFATC2 JASPAR yes 118452842
chr1 212654958 212654971 POU2F2 JASPAR yes 35128231
chr1 212654958 212654971 POU2F2 JASPAR yes 118452843
chr1 212654960 212654974 POU4F1 JASPAR yes 35128232
chr1 212654960 212654974 POU4F1 JASPAR yes 118452844
chr1 212654960 212654976 POU4F2 JASPAR yes 35128233
chr1 212654960 212654976 POU4F3 JASPAR yes 35128234
chr1 212654960 212654976 POU4F2 JASPAR yes 118452845
chr1 212654960 212654976 POU4F3 JASPAR yes 118452846
chr1 212654961 212654973 HNF1B JASPAR yes 35128235
chr1 212654961 212654973 HNF1B JASPAR yes 118452847
chr1 212654964 212654975 FOXB1 JASPAR yes 35128236
chr1 212654964 212654975 PHOX2A JASPAR yes 35128237
chr1 212654964 212654975 PROP1 JASPAR yes 35128238
chr1 212654964 212654975 FOXB1 JASPAR yes 118452848
chr1 212654964 212654975 PHOX2A JASPAR yes 118452849
chr1 212654964 212654975 PROP1 JASPAR yes 118452850
chr1 212654965 212654969 YY1 TRANSFAC yes 35128239
chr1 212654965 212654969 YY1 TRANSFAC yes 118452851
chr1 212654967 212654977 ALX3 JASPAR yes 35128240
chr1 212654967 212654977 GSX1 JASPAR yes 35128241
chr1 212654967 212654977 GSX2 JASPAR yes 35128242
chr1 212654967 212654977 LHX6 JASPAR yes 35128243
chr1 212654967 212654977 MIXL1 JASPAR yes 35128244
chr1 212654967 212654977 MNX1 JASPAR yes 35128245
chr1 212654967 212654977 NOTO JASPAR yes 35128246
chr1 212654967 212654977 POU6F1 JASPAR yes 35128247
chr1 212654967 212654977 RAX JASPAR yes 35128248
chr1 212654967 212654977 ALX3 JASPAR yes 118452852
chr1 212654967 212654977 GSX1 JASPAR yes 118452853
chr1 212654967 212654977 GSX2 JASPAR yes 118452854
chr1 212654967 212654977 LHX6 JASPAR yes 118452855
chr1 212654967 212654977 MIXL1 JASPAR yes 118452856
chr1 212654967 212654977 MNX1 JASPAR yes 118452857
chr1 212654967 212654977 NOTO JASPAR yes 118452858
chr1 212654967 212654977 POU6F1 JASPAR yes 118452859
chr1 212654967 212654977 RAX JASPAR yes 118452860
chr1 212654968 212654976 ISX JASPAR yes 35128249
chr1 212654968 212654976 LMX1A JASPAR yes 35128250
chr1 212654968 212654976 LMX1B JASPAR yes 35128251
chr1 212654968 212654976 NKX6-1 JASPAR yes 35128252
chr1 212654968 212654976 NKX6-2 JASPAR yes 35128253
chr1 212654968 212654976 PRRX1 JASPAR yes 35128254
chr1 212654968 212654976 RAX2 JASPAR yes 35128255
chr1 212654968 212654976 SHOX JASPAR yes 35128256
chr1 212654968 212654976 UNCX JASPAR yes 35128257
chr1 212654968 212654976 VAX1 JASPAR yes 35128258
chr1 212654968 212654976 ISX JASPAR yes 118452861
chr1 212654968 212654976 LMX1A JASPAR yes 118452862
chr1 212654968 212654976 LMX1B JASPAR yes 118452863
chr1 212654968 212654976 NKX6-1 JASPAR yes 118452864
chr1 212654968 212654976 NKX6-2 JASPAR yes 118452865
chr1 212654968 212654976 PRRX1 JASPAR yes 118452866
chr1 212654968 212654976 RAX2 JASPAR yes 118452867
chr1 212654968 212654976 SHOX JASPAR yes 118452868
chr1 212654968 212654976 UNCX JASPAR yes 118452869
chr1 212654968 212654976 VAX1 JASPAR yes 118452870
chr1 212654969 212654979 PAX3 JASPAR yes 35128259
chr1 212654969 212654979 PAX7 JASPAR yes 35128260
chr1 212654969 212654979 PAX3 JASPAR yes 118452871
chr1 212654969 212654979 PAX7 JASPAR yes 118452872
chr1 212654982 212654998 SOX8 JASPAR yes 35128261
chr1 212654982 212654998 SOX8 JASPAR yes 118452873
chr1 212654985 212655003 NR3C1 JASPAR yes 35128262
chr1 212654985 212655003 NR3C1 JASPAR yes 118452874
chr1 212654986 212655007 IRF1 JASPAR yes 35128263
chr1 212654986 212655007 IRF1 JASPAR yes 118452875
chr1 212654988 212655009 IRF1 JASPAR yes 35128264
chr1 212654988 212655009 IRF1 JASPAR yes 118452876
chr1 212654991 212654995 YY1 TRANSFAC yes 35128265
chr1 212654991 212654995 YY1 TRANSFAC yes 118452877
chr1 212654991 212655006 FOXP1 JASPAR yes 35128266
chr1 212654991 212655006 FOXP1 JASPAR yes 118452878
chr1 212654992 212655007 FOXP1 JASPAR yes 35128267
chr1 212654992 212655007 FOXP1 JASPAR yes 118452879
chr1 212654993 212655008 FOXP1 JASPAR yes 35128268
chr1 212654993 212655008 FOXP1 JASPAR yes 118452880
chr1 212654994 212655009 FOXP1 JASPAR yes 35128269
chr1 212654994 212655009 FOXP1 JASPAR yes 118452881
chr1 212654995 212655010 FOXP1 JASPAR yes 35128270
chr1 212654995 212655010 FOXP1 JASPAR yes 118452882
chr1 212654996 212655011 FOXP1 JASPAR yes 35128271
chr1 212654996 212655011 FOXP1 JASPAR yes 118452883
chr1 212655016 212655035 PAX5 JASPAR yes 35128272
chr1 212655016 212655035 PAX5 JASPAR yes 118452884
SNP sites on vista5000[chr1:212654863-212655019]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 212654993 rs11353237 AT A
FOXP1 IRF1 NR3C1 SOX8 YY1
923270
Genes possibly regulated by vista5000[chr1:212654863-212655019]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 212537273 212588243 - TMEM206 ENSG00000065600.8 212588243 0.71 1.0 1826 33380
chr1 212606229 212619714 + NENF ENSG00000117691.5 212606229 0.7 1.0 1827 51366
chr1 212738676 212794119 + ATF3 ENSG00000162772.12 212738676 0.8 1.0 1828 16343
Expression level of Genes
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miRNAs possibly regulated by vista5000[chr1:212654863-212655019]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results