EnhancerDB
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  3. vista5005[chr1:212661846-212662402]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5005[chr1:212661846-212662402]
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Tissue distribution of vista5005
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Transcription factor that possibly regulate vista5005[chr1:212661846-212662402]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 212661770 212662194 TCF12 UCSC Txn Factor no Conserved 107868526
chr1 212661804 212662260 JUND UCSC Txn Factor no Conserved 107868531
chr1 212661821 212662437 EP300 UCSC Txn Factor no Conserved 107868536
chr1 212661868 212662282 CEBPB UCSC Txn Factor no Conserved 107868542
chr1 212661963 212662259 USF1 UCSC Txn Factor no Conserved 107868560
chr1 212661968 212662304 USF2 UCSC Txn Factor no Conserved 107868562
chr1 212662012 212662522 POLR2A UCSC Txn Factor no Conserved 107868570
chr1 212661841 212661847 HiNF-A TRANSFAC yes 35129411
chr1 212661841 212661847 HiNF-A TRANSFAC yes 118453222
chr1 212661849 212661855 YY1 JASPAR yes 35129412
chr1 212661849 212661855 YY1 JASPAR yes 118453223
chr1 212661857 212661872 HNF4A JASPAR yes 35129413
chr1 212661857 212661872 HNF4A JASPAR yes 118453224
chr1 212661859 212661863 H4TF2 TRANSFAC yes 35129414
chr1 212661859 212661863 H4TF2 TRANSFAC yes 118453225
chr1 212661870 212661876 NFIC JASPAR yes 35129415
chr1 212661870 212661876 NFIC JASPAR yes 118453226
chr1 212661885 212661895 OLIG2 JASPAR yes 35129416
chr1 212661885 212661895 OLIG3 JASPAR yes 35129417
chr1 212661885 212661895 OLIG2 JASPAR yes 118453227
chr1 212661885 212661895 OLIG3 JASPAR yes 118453228
chr1 212661887 212661902 FOXA1 JASPAR yes 35129418
chr1 212661887 212661902 FOXA1 JASPAR yes 118453229
chr1 212661889 212661897 FOXL1 JASPAR yes 35129419
chr1 212661889 212661897 FOXL1 JASPAR yes 118453230
chr1 212661889 212661900 FOXP2 JASPAR yes 35129420
chr1 212661889 212661900 FOXP2 JASPAR yes 118453231
chr1 212661889 212661901 FOXC2 JASPAR yes 35129421
chr1 212661889 212661901 FOXC2 JASPAR yes 118453232
chr1 212661890 212661898 FOXD1 JASPAR yes 35129422
chr1 212661890 212661898 FOXG1 JASPAR yes 35129423
chr1 212661890 212661898 FOXO3 JASPAR yes 35129424
chr1 212661890 212661898 FOXD1 JASPAR yes 118453233
chr1 212661890 212661898 FOXG1 JASPAR yes 118453234
chr1 212661890 212661898 FOXO3 JASPAR yes 118453235
chr1 212661890 212661901 FOXB1 JASPAR yes 35129425
chr1 212661890 212661901 FOXC1 JASPAR yes 35129426
chr1 212661890 212661901 FOXB1 JASPAR yes 118453236
chr1 212661890 212661901 FOXC1 JASPAR yes 118453237
chr1 212661891 212661898 FOXD2 JASPAR yes 35129427
chr1 212661891 212661898 FOXI1 JASPAR yes 35129428
chr1 212661891 212661898 FOXL1 JASPAR yes 35129429
chr1 212661891 212661898 FOXO4 JASPAR yes 35129430
chr1 212661891 212661898 FOXO6 JASPAR yes 35129431
chr1 212661891 212661898 FOXP3 JASPAR yes 35129432
chr1 212661891 212661898 FOXD2 JASPAR yes 118453238
chr1 212661891 212661898 FOXI1 JASPAR yes 118453239
chr1 212661891 212661898 FOXL1 JASPAR yes 118453240
chr1 212661891 212661898 FOXO4 JASPAR yes 118453241
chr1 212661891 212661898 FOXO6 JASPAR yes 118453242
chr1 212661891 212661898 FOXP3 JASPAR yes 118453243
chr1 212661891 212661899 FOXO3 JASPAR yes 35129433
chr1 212661891 212661899 FOXO3 JASPAR yes 118453244
chr1 212661891 212661902 FOXA1 JASPAR yes 35129434
chr1 212661891 212661902 FOXA1 JASPAR yes 118453245
chr1 212661899 212661918 RFX2 JASPAR yes 35129435
chr1 212661899 212661918 RFX2 JASPAR yes 118453246
chr1 212661903 212661919 RFX2 JASPAR yes 35129436
chr1 212661903 212661919 RFX3 JASPAR yes 35129437
chr1 212661903 212661919 RFX4 JASPAR yes 35129438
chr1 212661903 212661919 RFX5 JASPAR yes 35129439
chr1 212661903 212661919 RFX2 JASPAR yes 118453247
chr1 212661903 212661919 RFX3 JASPAR yes 118453248
chr1 212661903 212661919 RFX4 JASPAR yes 118453249
chr1 212661903 212661919 RFX5 JASPAR yes 118453250
chr1 212661904 212661923 RFX2 JASPAR yes 35129440
chr1 212661904 212661923 RFX2 JASPAR yes 118453251
chr1 212661906 212661917 STAT3 JASPAR yes 35129441
chr1 212661906 212661917 STAT3 JASPAR yes 118453252
chr1 212661911 212661922 NFKB1 JASPAR yes 35129442
chr1 212661911 212661922 NFKB1 JASPAR yes 118453253
chr1 212661912 212661923 NFKB1 JASPAR yes 35129443
chr1 212661912 212661923 NFKB1 JASPAR yes 118453254
chr1 212661919 212661925 MZF1 JASPAR yes 35129444
chr1 212661919 212661925 MZF1 JASPAR yes 118453255
chr1 212661938 212661950 HNF1B JASPAR yes 35129445
chr1 212661938 212661950 HNF1B JASPAR yes 118453256
chr1 212661942 212661946 YY1 TRANSFAC yes 35129446
chr1 212661942 212661946 YY1 TRANSFAC yes 118453257
chr1 212661945 212661960 MEF2C JASPAR yes 35129447
chr1 212661945 212661960 MEF2C JASPAR yes 118453258
chr1 212661947 212661967 RREB1 JASPAR yes 35129448
chr1 212661947 212661967 RREB1 JASPAR yes 118453259
chr1 212661949 212661964 FOXP1 JASPAR yes 35129449
chr1 212661949 212661964 FOXP1 JASPAR yes 118453260
chr1 212661950 212661961 FOXA1 JASPAR yes 35129450
chr1 212661950 212661961 FOXA1 JASPAR yes 118453261
chr1 212661951 212661963 FOXC2 JASPAR yes 35129451
chr1 212661951 212661963 FOXC2 JASPAR yes 118453262
chr1 212661952 212661964 FOXI1 JASPAR yes 35129452
chr1 212661952 212661964 FOXI1 JASPAR yes 118453263
chr1 212661980 212661986 HiNF-A TRANSFAC yes 35129453
chr1 212661980 212661986 HiNF-A TRANSFAC yes 118453264
chr1 212661980 212661995 JUND JASPAR yes 35129454
chr1 212661980 212661995 JUND JASPAR yes 118453265
chr1 212661981 212661994 JUN JASPAR yes 35129455
chr1 212661981 212661994 JUN JASPAR yes 118453266
chr1 212661982 212661995 ATF4 JASPAR yes 35129456
chr1 212661982 212661995 ATF4 JASPAR yes 118453267
chr1 212661983 212661994 CEBPA JASPAR yes 35129457
chr1 212661983 212661994 CEBPA JASPAR yes 118453268
chr1 212661984 212661995 CEBPB JASPAR yes 35129458
chr1 212661984 212661995 CEBPB JASPAR yes 118453269
chr1 212661999 212662011 PKNOX1 JASPAR yes 35129459
chr1 212661999 212662011 PKNOX2 JASPAR yes 35129460
chr1 212661999 212662011 TGIF1 JASPAR yes 35129461
chr1 212661999 212662011 TGIF2 JASPAR yes 35129462
chr1 212661999 212662011 PKNOX1 JASPAR yes 118453270
chr1 212661999 212662011 PKNOX2 JASPAR yes 118453271
chr1 212661999 212662011 TGIF1 JASPAR yes 118453272
chr1 212661999 212662011 TGIF2 JASPAR yes 118453273
chr1 212662020 212662033 ZBTB18 JASPAR yes 35129463
chr1 212662020 212662033 ZBTB18 JASPAR yes 118453274
chr1 212662021 212662031 FIGLA JASPAR yes 35129464
chr1 212662021 212662031 ID4 JASPAR yes 35129465
chr1 212662021 212662031 TCF3 JASPAR yes 35129466
chr1 212662021 212662031 TCF4 JASPAR yes 35129467
chr1 212662021 212662031 FIGLA JASPAR yes 118453275
chr1 212662021 212662031 ID4 JASPAR yes 118453276
chr1 212662021 212662031 TCF3 JASPAR yes 118453277
chr1 212662021 212662031 TCF4 JASPAR yes 118453278
chr1 212662023 212662028 USF2 TRANSFAC yes 35129468
chr1 212662023 212662028 USF2 TRANSFAC yes 118453279
chr1 212662028 212662032 LFA1 TRANSFAC yes 35129469
chr1 212662028 212662032 LFA1 TRANSFAC yes 118453280
chr1 212662040 212662050 TBX21 JASPAR yes 35129470
chr1 212662040 212662050 TBX21 JASPAR yes 118453281
chr1 212662040 212662051 TBX20 JASPAR yes 35129471
chr1 212662040 212662051 TBX2 JASPAR yes 35129472
chr1 212662040 212662051 TBX20 JASPAR yes 118453282
chr1 212662040 212662051 TBX2 JASPAR yes 118453283
chr1 212662040 212662053 EOMES JASPAR yes 35129473
chr1 212662040 212662053 EOMES JASPAR yes 118453284
chr1 212662041 212662049 MGA JASPAR yes 35129474
chr1 212662041 212662049 TBX15 JASPAR yes 35129475
chr1 212662041 212662049 TBX1 JASPAR yes 35129476
chr1 212662041 212662049 TBX4 JASPAR yes 35129477
chr1 212662041 212662049 TBX5 JASPAR yes 35129478
chr1 212662041 212662049 MGA JASPAR yes 118453285
chr1 212662041 212662049 TBX15 JASPAR yes 118453286
chr1 212662041 212662049 TBX1 JASPAR yes 118453287
chr1 212662041 212662049 TBX4 JASPAR yes 118453288
chr1 212662041 212662049 TBX5 JASPAR yes 118453289
chr1 212662041 212662056 JUND JASPAR yes 35129479
chr1 212662041 212662056 JUND JASPAR yes 118453290
chr1 212662042 212662055 JUN JASPAR yes 35129480
chr1 212662042 212662055 JUN JASPAR yes 118453291
chr1 212662043 212662057 ATF7 JASPAR yes 35129481
chr1 212662043 212662057 BATF3 JASPAR yes 35129482
chr1 212662043 212662057 ATF7 JASPAR yes 118453292
chr1 212662043 212662057 BATF3 JASPAR yes 118453293
chr1 212662044 212662056 JDP2 JASPAR yes 35129483
chr1 212662044 212662056 JDP2 JASPAR yes 118453294
chr1 212662044 212662059 JUND JASPAR yes 35129484
chr1 212662044 212662059 JUND JASPAR yes 118453295
chr1 212662059 212662065 HiNF-A TRANSFAC yes 35129485
chr1 212662059 212662065 HiNF-A TRANSFAC yes 118453296
chr1 212662067 212662081 TLX1 JASPAR yes 35129486
chr1 212662067 212662081 TLX1 JASPAR yes 118453297
chr1 212662086 212662090 ESR1 TRANSFAC yes 35129487
chr1 212662086 212662090 ESR1 TRANSFAC yes 118453298
chr1 212662086 212662096 MAX JASPAR yes 35129488
chr1 212662086 212662096 MAX JASPAR yes 118453299
chr1 212662086 212662097 USF1 JASPAR yes 35129489
chr1 212662086 212662097 USF2 JASPAR yes 35129490
chr1 212662086 212662097 USF1 JASPAR yes 118453300
chr1 212662086 212662097 USF2 JASPAR yes 118453301
chr1 212662094 212662107 NFKB1 JASPAR yes 35129491
chr1 212662094 212662107 NFKB2 JASPAR yes 35129492
chr1 212662094 212662107 NFKB1 JASPAR yes 118453302
chr1 212662094 212662107 NFKB2 JASPAR yes 118453303
chr1 212662095 212662105 NFKB1 JASPAR yes 35129493
chr1 212662095 212662105 RELA JASPAR yes 35129494
chr1 212662095 212662105 REL JASPAR yes 35129495
chr1 212662095 212662105 NFKB1 JASPAR yes 118453304
chr1 212662095 212662105 RELA JASPAR yes 118453305
chr1 212662095 212662105 REL JASPAR yes 118453306
chr1 212662095 212662106 NFKB1 JASPAR yes 35129496
chr1 212662095 212662106 NFKB1 JASPAR yes 118453307
chr1 212662096 212662107 NFKB1 JASPAR yes 35129497
chr1 212662096 212662107 NFKB1 JASPAR yes 118453308
chr1 212662102 212662108 MZF1 JASPAR yes 35129498
chr1 212662102 212662108 MZF1 JASPAR yes 118453309
chr1 212662109 212662116 JUN TRANSFAC yes 35129499
chr1 212662109 212662116 JUN TRANSFAC yes 118453310
chr1 212662138 212662153 IRF9 JASPAR yes 35129500
chr1 212662138 212662153 IRF9 JASPAR yes 118453311
chr1 212662146 212662160 RORA JASPAR yes 35129501
chr1 212662146 212662160 RORA JASPAR yes 118453312
chr1 212662151 212662169 ESR2 JASPAR yes 35129502
chr1 212662151 212662169 ESR2 JASPAR yes 118453313
chr1 212662152 212662165 ZBED1 JASPAR yes 35129503
chr1 212662152 212662165 ZBED1 JASPAR yes 118453314
chr1 212662158 212662167 CDX1 JASPAR yes 35129504
chr1 212662158 212662167 CDX1 JASPAR yes 118453315
chr1 212662173 212662184 USF1 JASPAR yes 35129505
chr1 212662173 212662184 USF1 JASPAR yes 118453316
chr1 212662174 212662184 SREBF2 JASPAR yes 35129506
chr1 212662174 212662184 TFE3 JASPAR yes 35129507
chr1 212662174 212662184 TFEB JASPAR yes 35129508
chr1 212662174 212662184 TFEC JASPAR yes 35129509
chr1 212662174 212662184 SREBF2 JASPAR yes 118453317
chr1 212662174 212662184 TFE3 JASPAR yes 118453318
chr1 212662174 212662184 TFEB JASPAR yes 118453319
chr1 212662174 212662184 TFEC JASPAR yes 118453320
chr1 212662174 212662185 USF1 JASPAR yes 35129510
chr1 212662174 212662185 USF2 JASPAR yes 35129511
chr1 212662174 212662185 USF1 JASPAR yes 118453321
chr1 212662174 212662185 USF2 JASPAR yes 118453322
chr1 212662177 212662190 ATF4 JASPAR yes 35129512
chr1 212662177 212662190 ATF4 JASPAR yes 118453323
chr1 212662189 212662195 SOX10 JASPAR yes 35129513
chr1 212662189 212662195 SOX10 JASPAR yes 118453324
chr1 212662197 212662212 RUNX2 JASPAR yes 35129514
chr1 212662197 212662212 RUNX2 JASPAR yes 118453325
chr1 212662226 212662230 YY1 TRANSFAC yes 35129515
chr1 212662226 212662230 YY1 TRANSFAC yes 118453326
chr1 212662227 212662238 NFE2L2 JASPAR yes 35129516
chr1 212662227 212662238 NFE2L2 JASPAR yes 118453327
chr1 212662228 212662235 NKX3-1 JASPAR yes 35129517
chr1 212662228 212662235 NKX3-1 JASPAR yes 118453328
chr1 212662229 212662237 FOXC1 JASPAR yes 35129518
chr1 212662229 212662237 FOXC1 JASPAR yes 118453329
chr1 212662274 212662288 E2F7 JASPAR yes 35129519
chr1 212662274 212662288 E2F7 JASPAR yes 118453330
chr1 212662275 212662287 E2F8 JASPAR yes 35129520
chr1 212662275 212662287 E2F8 JASPAR yes 118453331
chr1 212662282 212662292 RELA JASPAR yes 35129521
chr1 212662282 212662292 RELA JASPAR yes 118453332
chr1 212662315 212662330 STAT1 JASPAR yes 35129522
chr1 212662315 212662330 STAT1 JASPAR yes 118453333
chr1 212662317 212662328 STAT1 JASPAR yes 35129523
chr1 212662317 212662328 STAT3 JASPAR yes 35129524
chr1 212662317 212662328 STAT1 JASPAR yes 118453334
chr1 212662317 212662328 STAT3 JASPAR yes 118453335
chr1 212662338 212662344 TCF4 TRANSFAC yes 35129525
chr1 212662338 212662344 TCF4 TRANSFAC yes 118453336
chr1 212662343 212662357 GATA2 JASPAR yes 35129526
chr1 212662343 212662357 GATA2 JASPAR yes 118453337
SNP sites on vista5005[chr1:212661846-212662402]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 212662049 rs641053 A T
ATF7 BATF3 CEBPB EOMES EP300 JDP2 JUN JUND MGA POLR2A TBX1 TBX15 TBX2 TBX20 TBX21 TBX4 TBX5 TCF12 USF1 USF2
923357
chr1 212662053 rs143742853 C T
ATF7 BATF3 CEBPB EOMES EP300 JDP2 JUN JUND POLR2A TCF12 USF1 USF2
923358
chr1 212662335 rs182085469 C G
EP300 POLR2A
923359
Genes possibly regulated by vista5005[chr1:212661846-212662402]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 212537273 212588243 - TMEM206 ENSG00000065600.8 212588243 0.71 1.0 1826 26397
chr1 212606229 212619714 + NENF ENSG00000117691.5 212606229 0.7 1.0 1827 44383
chr1 212738676 212794119 + ATF3 ENSG00000162772.12 212738676 0.8 1.0 1828 23726
Expression level of Genes
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miRNAs possibly regulated by vista5005[chr1:212661846-212662402]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results