EnhancerDB
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  3. vista50058[chr5:169308907-169309212]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50058[chr5:169308907-169309212]
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Tissue distribution of vista50058
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Transcription factor that possibly regulate vista50058[chr5:169308907-169309212]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 169308917 169308921 YY1 TRANSFAC yes 70757451
chr5 169308922 169308937 FOXP1 JASPAR yes 70757452
chr5 169308925 169308937 FOXI1 JASPAR yes 70757453
chr5 169308926 169308934 FOXO3 JASPAR yes 70757454
chr5 169308929 169308941 FOXI1 JASPAR yes 70757455
chr5 169308936 169308939 MYB TRANSFAC yes 70757456
chr5 169308953 169308964 GCM1 JASPAR yes 70757457
chr5 169308956 169308976 PPARG JASPAR yes 70757458
chr5 169308957 169308977 PPARG JASPAR yes 70757459
chr5 169308958 169308972 JUN JASPAR yes 70757460
chr5 169308960 169308971 BATF JASPAR yes 70757461
chr5 169308961 169308972 NFE2L2 JASPAR yes 70757462
chr5 169308962 169308973 FOS JASPAR yes 70757463
chr5 169308962 169308973 FOSL1 JASPAR yes 70757464
chr5 169308962 169308973 JUND JASPAR yes 70757465
chr5 169308963 169308974 FOSL2 JASPAR yes 70757466
chr5 169308963 169308974 JUNB JASPAR yes 70757467
chr5 169308963 169308977 JUN JASPAR yes 70757468
chr5 169308967 169308979 HNF1B JASPAR yes 70757469
chr5 169308981 169308985 YY1 TRANSFAC yes 70757470
chr5 169309006 169309020 IRF7 JASPAR yes 70757471
chr5 169309029 169309044 JUND JASPAR yes 70757472
chr5 169309030 169309043 JUN JASPAR yes 70757473
chr5 169309032 169309047 JUND JASPAR yes 70757474
chr5 169309036 169309057 IRF1 JASPAR yes 70757475
chr5 169309040 169309044 YY1 TRANSFAC yes 70757476
chr5 169309049 169309059 ALX3 JASPAR yes 70757477
chr5 169309049 169309059 GBX1 JASPAR yes 70757478
chr5 169309049 169309059 HESX1 JASPAR yes 70757479
chr5 169309049 169309059 LBX2 JASPAR yes 70757480
chr5 169309050 169309054 H1TF2 TRANSFAC yes 70757481
chr5 169309050 169309054 NFE TRANSFAC yes 70757482
chr5 169309050 169309054 SRF TRANSFAC yes 70757483
chr5 169309050 169309058 BARX1 JASPAR yes 70757484
chr5 169309050 169309058 BSX JASPAR yes 70757485
chr5 169309050 169309058 EN1 JASPAR yes 70757486
chr5 169309050 169309058 ISX JASPAR yes 70757487
chr5 169309050 169309058 LHX9 JASPAR yes 70757488
chr5 169309050 169309058 MSX1 JASPAR yes 70757489
chr5 169309050 169309058 MSX2 JASPAR yes 70757490
chr5 169309050 169309058 PRRX1 JASPAR yes 70757491
chr5 169309050 169309058 RAX2 JASPAR yes 70757492
chr5 169309050 169309058 SHOX JASPAR yes 70757493
chr5 169309060 169309064 ESR1 TRANSFAC yes 70757494
chr5 169309079 169309093 TCF7L2 JASPAR yes 70757495
chr5 169309083 169309091 LEF1 TRANSFAC yes 70757496
chr5 169309095 169309112 RARA JASPAR yes 70757497
chr5 169309102 169309107 ETS2 TRANSFAC yes 70757498
chr5 169309103 169309114 ESRRB JASPAR yes 70757499
chr5 169309103 169309116 NR2F1 JASPAR yes 70757500
chr5 169309105 169309113 NR4A2 JASPAR yes 70757501
chr5 169309105 169309123 RARA JASPAR yes 70757502
chr5 169309107 169309111 ESR1 TRANSFAC yes 70757503
chr5 169309127 169309133 YY1 JASPAR yes 70757504
chr5 169309137 169309157 ESR1 JASPAR yes 70757505
chr5 169309140 169309146 SOX10 JASPAR yes 70757506
chr5 169309141 169309158 ESR1 JASPAR yes 70757507
chr5 169309195 169309205 SP1 JASPAR yes 70757508
chr5 169309196 169309203 CEBPA TRANSFAC yes 70757509
chr5 169309198 169309208 MZF1 JASPAR yes 70757510
chr5 169309201 169309211 SP1 JASPAR yes 70757511
chr5 169309202 169309212 SP1 JASPAR yes 70757512
SNP sites on vista50058[chr5:169308907-169309212]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 169308915 rs144954941 G A no 8687592
chr5 169308924 rs182746611 G A
FOXP1
8687593
chr5 169308988 rs540207412 G A no 8687594
chr5 169309032 rs73801674 T C
JUN JUND
8687595
chr5 169309080 rs261074 C T
TCF7L2
8687596
chr5 169309187 rs550529006 A T no 8687597
Genes possibly regulated by vista50058[chr5:169308907-169309212]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 169291268 169407744 - FAM196B ENSG00000204767.3 169407744 0.84 0.97 5965 1468
Expression level of Genes
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miRNAs possibly regulated by vista50058[chr5:169308907-169309212]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results