EnhancerDB
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  3. vista50061[chr5:169398752-169398877]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50061[chr5:169398752-169398877]
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Tissue distribution of vista50061
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Transcription factor that possibly regulate vista50061[chr5:169398752-169398877]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 169398745 169398756 GCM1 JASPAR yes 67664265
chr5 169398745 169398756 GCM1 JASPAR yes 70757601
chr5 169398746 169398759 TFAP2A JASPAR yes 67664266
chr5 169398746 169398759 TFAP2A JASPAR yes 70757602
chr5 169398777 169398791 TCF7L2 JASPAR yes 67664267
chr5 169398777 169398791 TCF7L2 JASPAR yes 70757603
chr5 169398777 169398792 LEF1 JASPAR yes 67664268
chr5 169398777 169398792 LEF1 JASPAR yes 70757604
chr5 169398841 169398851 HMBOX1 JASPAR yes 67664269
chr5 169398841 169398851 HMBOX1 JASPAR yes 70757605
chr5 169398845 169398857 HNF1B JASPAR yes 67664270
chr5 169398845 169398857 HNF1B JASPAR yes 70757606
chr5 169398846 169398860 RXRB JASPAR yes 67664271
chr5 169398846 169398860 RXRG JASPAR yes 67664272
chr5 169398846 169398860 RXRB JASPAR yes 70757607
chr5 169398846 169398860 RXRG JASPAR yes 70757608
chr5 169398876 169398882 LEF1 TRANSFAC yes 67664273
chr5 169398876 169398882 SOX10 JASPAR yes 67664274
chr5 169398876 169398882 LEF1 TRANSFAC yes 70757609
chr5 169398876 169398882 SOX10 JASPAR yes 70757610
SNP sites on vista50061[chr5:169398752-169398877]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 169398772 rs142159689 C A no 8688115
Genes possibly regulated by vista50061[chr5:169398752-169398877]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 169291268 169407744 - FAM196B ENSG00000204767.3 169407744 0.84 0.97 5965 91133
Expression level of Genes
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miRNAs possibly regulated by vista50061[chr5:169398752-169398877]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results