EnhancerDB
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  3. vista50063[chr5:169413980-169414097]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50063[chr5:169413980-169414097]
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Tissue distribution of vista50063
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Transcription factor that possibly regulate vista50063[chr5:169413980-169414097]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 169413981 169413984 MYB TRANSFAC yes 70757663
chr5 169413985 169414005 TP53 JASPAR yes 70757664
chr5 169413988 169414006 TP53 JASPAR yes 70757665
chr5 169413989 169414004 TP53 JASPAR yes 70757666
chr5 169413997 169414018 IRF1 JASPAR yes 70757667
chr5 169414001 169414015 SPIC JASPAR yes 70757668
chr5 169414001 169414016 PRDM1 JASPAR yes 70757669
chr5 169414013 169414023 NFIA JASPAR yes 70757670
chr5 169414015 169414021 NFIC JASPAR yes 70757671
chr5 169414025 169414028 MYB TRANSFAC yes 70757672
chr5 169414042 169414050 TBX5 JASPAR yes 70757673
chr5 169414045 169414060 TFAP2C JASPAR yes 70757674
chr5 169414047 169414059 TFAP2A JASPAR yes 70757675
chr5 169414047 169414059 TFAP2B JASPAR yes 70757676
chr5 169414047 169414059 TFAP2C JASPAR yes 70757677
chr5 169414047 169414062 TFAP2A JASPAR yes 70757678
chr5 169414048 169414059 TFAP2A JASPAR yes 70757679
chr5 169414051 169414065 PAX6 JASPAR yes 70757680
chr5 169414061 169414072 DMRT3 JASPAR yes 70757681
chr5 169414064 169414069 GATA1 TRANSFAC yes 70757682
SNP sites on vista50063[chr5:169413980-169414097]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 169413980 rs191411250 A G no 8688207
chr5 169414036 rs115356027 A G no 8688208
Genes possibly regulated by vista50063[chr5:169413980-169414097]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 169291268 169407744 - FAM196B ENSG00000204767.3 169407744 0.84 0.97 5965 93764
Expression level of Genes
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miRNAs possibly regulated by vista50063[chr5:169413980-169414097]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results