EnhancerDB
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  3. vista50071[chr5:169717491-169717845]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50071[chr5:169717491-169717845]
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Tissue distribution of vista50071
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Transcription factor that possibly regulate vista50071[chr5:169717491-169717845]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 169717510 169717517 NFATC2 JASPAR yes 70758274
chr5 169717528 169717532 YY1 TRANSFAC yes 70758275
chr5 169717538 169717559 ZNF263 JASPAR yes 70758276
chr5 169717550 169717571 ZNF263 JASPAR yes 70758277
chr5 169717553 169717574 ZNF263 JASPAR yes 70758278
chr5 169717565 169717586 ZNF263 JASPAR yes 70758279
chr5 169717569 169717579 SP1 JASPAR yes 70758280
chr5 169717623 169717635 PKNOX1 JASPAR yes 70758281
chr5 169717623 169717635 PKNOX2 JASPAR yes 70758282
chr5 169717623 169717635 TGIF1 JASPAR yes 70758283
chr5 169717623 169717635 TGIF2 JASPAR yes 70758284
chr5 169717624 169717634 MYF6 JASPAR yes 70758285
chr5 169717652 169717662 NFATC3 JASPAR yes 70758286
chr5 169717653 169717660 NFATC2 JASPAR yes 70758287
chr5 169717692 169717703 CEBPB JASPAR yes 70758288
chr5 169717702 169717717 RFX5 JASPAR yes 70758289
chr5 169717722 169717726 YY1 TRANSFAC yes 70758290
chr5 169717722 169717733 HOXA10 JASPAR yes 70758291
chr5 169717723 169717732 CDX1 JASPAR yes 70758292
chr5 169717723 169717734 CDX2 JASPAR yes 70758293
chr5 169717734 169717749 ESR2 JASPAR yes 70758294
chr5 169717741 169717752 ESRRA JASPAR yes 70758295
chr5 169717742 169717750 NR4A2 JASPAR yes 70758296
chr5 169717743 169717753 RORA JASPAR yes 70758297
chr5 169717750 169717754 YY1 TRANSFAC yes 70758298
chr5 169717760 169717775 RUNX2 JASPAR yes 70758299
chr5 169717769 169717773 ESR1 TRANSFAC yes 70758300
chr5 169717783 169717801 TP73 JASPAR yes 70758301
chr5 169717786 169717799 NR2F1 JASPAR yes 70758302
chr5 169717790 169717794 ESR1 TRANSFAC yes 70758303
chr5 169717790 169717801 USF1 JASPAR yes 70758304
chr5 169717790 169717801 USF2 JASPAR yes 70758305
chr5 169717791 169717801 TFEB JASPAR yes 70758306
chr5 169717791 169717801 TFEC JASPAR yes 70758307
chr5 169717809 169717821 PKNOX2 JASPAR yes 70758308
chr5 169717826 169717841 PRDM1 JASPAR yes 70758309
SNP sites on vista50071[chr5:169717491-169717845]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 169717508 rs315724 C T no 8689951
chr5 169717599 rs114477891 G T no 8689952
chr5 169717606 rs117700369 A G no 8689953
chr5 169717739 rs10068619 C T
ESR2
8689954
chr5 169717754 rs146007004 T C
YY1
8689955
chr5 169717774 rs114316050 A G
RUNX2
8689956
chr5 169717829 rs75750847 C T
PRDM1
8689957
chr5 169717844 rs548164843 T TATAACTTCTAGAAGC no 8689958
Genes possibly regulated by vista50071[chr5:169717491-169717845]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 169659451 169679579 + C5orf58 ENSG00000234511.4 169659451 0.96 0.96 5967 41960
chr5 169673241 169725231 - LCP2 ENSG00000043462.7 169725231 0.94 1.0 5968 92614
chr5 169780491 170163636 + KCNIP1 ENSG00000182132.8 169780491 0.97 0.99 5969 37354
chr5 169801675 169816681 - KCNMB1 ENSG00000145936.4 169816681 0.92 0.99 5970 1164
Expression level of Genes
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miRNAs possibly regulated by vista50071[chr5:169717491-169717845]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results