EnhancerDB
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  3. vista50072[chr5:169727677-169727933]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50072[chr5:169727677-169727933]
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Tissue distribution of vista50072
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Transcription factor that possibly regulate vista50072[chr5:169727677-169727933]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 169727729 169727734 SP1 TRANSFAC yes 67681752
chr5 169727729 169727734 SP1 TRANSFAC yes 70758310
chr5 169727730 169727735 SP1 TRANSFAC yes 67681753
chr5 169727730 169727735 SP1 TRANSFAC yes 70758311
chr5 169727730 169727739 HIC2 JASPAR yes 67681754
chr5 169727730 169727739 HIC2 JASPAR yes 70758312
chr5 169727733 169727737 LFA1 TRANSFAC yes 67681755
chr5 169727733 169727737 LFA1 TRANSFAC yes 70758313
chr5 169727744 169727754 SP1 TRANSFAC yes 67681756
chr5 169727744 169727754 SP1 TRANSFAC yes 70758314
chr5 169727745 169727755 SP1 JASPAR yes 67681757
chr5 169727745 169727755 SP1 JASPAR yes 70758315
chr5 169727746 169727752 SP1 TRANSFAC yes 67681758
chr5 169727746 169727752 SP1 TRANSFAC yes 70758316
chr5 169727746 169727756 SP1 JASPAR yes 67681759
chr5 169727746 169727756 SP1 JASPAR yes 70758317
chr5 169727747 169727757 ZNF740 JASPAR yes 67681760
chr5 169727747 169727757 ZNF740 JASPAR yes 70758318
chr5 169727749 169727764 RUNX2 JASPAR yes 67681761
chr5 169727749 169727764 RUNX2 JASPAR yes 70758319
chr5 169727750 169727756 MZF1 JASPAR yes 67681762
chr5 169727750 169727756 MZF1 JASPAR yes 70758320
chr5 169727757 169727772 RUNX2 JASPAR yes 67681763
chr5 169727757 169727772 RUNX2 JASPAR yes 70758321
chr5 169727768 169727780 TEAD1 JASPAR yes 67681764
chr5 169727768 169727780 TEAD1 JASPAR yes 70758322
chr5 169727783 169727787 LFA1 TRANSFAC yes 67681765
chr5 169727783 169727787 LFA1 TRANSFAC yes 70758323
chr5 169727783 169727795 NHLH1 JASPAR yes 67681766
chr5 169727783 169727795 NHLH1 JASPAR yes 70758324
chr5 169727784 169727794 MSC JASPAR yes 67681767
chr5 169727784 169727794 NHLH1 JASPAR yes 67681768
chr5 169727784 169727794 MSC JASPAR yes 70758325
chr5 169727784 169727794 NHLH1 JASPAR yes 70758326
chr5 169727793 169727807 SPIC JASPAR yes 67681769
chr5 169727793 169727807 SPIC JASPAR yes 70758327
chr5 169727799 169727804 ETS2 TRANSFAC yes 67681770
chr5 169727799 169727804 ETS2 TRANSFAC yes 70758328
chr5 169727802 169727822 TP63 JASPAR yes 67681771
chr5 169727802 169727822 TP63 JASPAR yes 70758329
chr5 169727803 169727821 TP63 JASPAR yes 67681772
chr5 169727803 169727821 TP63 JASPAR yes 70758330
chr5 169727807 169727822 TFAP2A JASPAR yes 67681773
chr5 169727807 169727822 TFAP2C JASPAR yes 67681774
chr5 169727807 169727822 TFAP2A JASPAR yes 70758331
chr5 169727807 169727822 TFAP2C JASPAR yes 70758332
chr5 169727816 169727831 TFAP2C JASPAR yes 67681775
chr5 169727816 169727831 TFAP2C JASPAR yes 70758333
chr5 169727829 169727836 SPIB JASPAR yes 67681776
chr5 169727829 169727836 SPIB JASPAR yes 70758334
chr5 169727832 169727847 TFAP2C JASPAR yes 67681777
chr5 169727832 169727847 TFAP2C JASPAR yes 70758335
chr5 169727836 169727842 MZF1 JASPAR yes 67681778
chr5 169727836 169727842 MZF1 JASPAR yes 70758336
chr5 169727851 169727856 H4TF1 TRANSFAC yes 67681779
chr5 169727851 169727856 H4TF1 TRANSFAC yes 70758337
chr5 169727852 169727863 CEBPA JASPAR yes 67681780
chr5 169727852 169727863 CEBPA JASPAR yes 70758338
chr5 169727882 169727886 NFE TRANSFAC yes 67681781
chr5 169727882 169727886 NFE TRANSFAC yes 70758339
chr5 169727894 169727899 SP1 TRANSFAC yes 67681782
chr5 169727894 169727899 SP1 TRANSFAC yes 70758340
chr5 169727927 169727946 REST JASPAR yes 67681783
chr5 169727927 169727946 REST JASPAR yes 70758341
chr5 169727931 169727942 EBF1 JASPAR yes 67681784
chr5 169727931 169727942 EBF1 JASPAR yes 70758342
SNP sites on vista50072[chr5:169727677-169727933]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 169727733 rs193047028 C T
HIC2 LFA1 SP1
8690007
chr5 169727771 rs114910445 C A
RUNX2 TEAD1
8690008
chr5 169727790 rs76434619 C G,T
MSC NHLH1
8690009
chr5 169727920 rs116653915 C T no 8690010
Genes possibly regulated by vista50072[chr5:169727677-169727933]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 169659451 169679579 + C5orf58 ENSG00000234511.4 169659451 0.96 0.96 5967 31774
chr5 169673241 169725231 - LCP2 ENSG00000043462.7 169725231 0.94 1.0 5968 97554
chr5 169780491 170163636 + KCNIP1 ENSG00000182132.8 169780491 0.97 0.99 5969 47442
chr5 169801675 169816681 - KCNMB1 ENSG00000145936.4 169816681 0.92 0.99 5970 11252
Expression level of Genes
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miRNAs possibly regulated by vista50072[chr5:169727677-169727933]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results