EnhancerDB
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  3. vista50075[chr5:169740418-169740772]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50075[chr5:169740418-169740772]
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Tissue distribution of vista50075
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Transcription factor that possibly regulate vista50075[chr5:169740418-169740772]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 169740445 169740455 HOXA13 JASPAR yes 67683605
chr5 169740445 169740455 HOXB13 JASPAR yes 67683606
chr5 169740445 169740455 HOXD13 JASPAR yes 67683607
chr5 169740445 169740455 HOXA13 JASPAR yes 70758542
chr5 169740445 169740455 HOXB13 JASPAR yes 70758543
chr5 169740445 169740455 HOXD13 JASPAR yes 70758544
chr5 169740460 169740470 NFATC3 JASPAR yes 67683608
chr5 169740460 169740470 NFATC3 JASPAR yes 70758545
chr5 169740462 169740470 FOXO3 JASPAR yes 67683609
chr5 169740462 169740470 FOXO3 JASPAR yes 70758546
chr5 169740467 169740473 SOX10 JASPAR yes 67683610
chr5 169740467 169740473 SOX10 JASPAR yes 70758547
chr5 169740479 169740490 USF2 JASPAR yes 67683611
chr5 169740479 169740490 USF2 JASPAR yes 70758548
chr5 169740479 169740497 NFYA JASPAR yes 67683612
chr5 169740479 169740497 NFYA JASPAR yes 70758549
chr5 169740480 169740490 MLXIPL JASPAR yes 67683613
chr5 169740480 169740490 SREBF1 JASPAR yes 67683614
chr5 169740480 169740490 SREBF2 JASPAR yes 67683615
chr5 169740480 169740490 TFAP4 JASPAR yes 67683616
chr5 169740480 169740490 TFEC JASPAR yes 67683617
chr5 169740480 169740490 MLXIPL JASPAR yes 70758550
chr5 169740480 169740490 SREBF1 JASPAR yes 70758551
chr5 169740480 169740490 SREBF2 JASPAR yes 70758552
chr5 169740480 169740490 TFAP4 JASPAR yes 70758553
chr5 169740480 169740490 TFEC JASPAR yes 70758554
chr5 169740482 169740487 USF2 TRANSFAC yes 67683618
chr5 169740482 169740487 USF2 TRANSFAC yes 70758555
chr5 169740482 169740498 NFYA JASPAR yes 67683619
chr5 169740482 169740498 NFYA JASPAR yes 70758556
chr5 169740485 169740500 NFYB JASPAR yes 67683620
chr5 169740485 169740500 NFYB JASPAR yes 70758557
chr5 169740487 169740492 NFY TRANSFAC yes 67683621
chr5 169740487 169740492 NFY TRANSFAC yes 70758558
chr5 169740501 169740513 PKNOX1 JASPAR yes 67683622
chr5 169740501 169740513 PKNOX2 JASPAR yes 67683623
chr5 169740501 169740513 TGIF1 JASPAR yes 67683624
chr5 169740501 169740513 TGIF2 JASPAR yes 67683625
chr5 169740501 169740513 PKNOX1 JASPAR yes 70758559
chr5 169740501 169740513 PKNOX2 JASPAR yes 70758560
chr5 169740501 169740513 TGIF1 JASPAR yes 70758561
chr5 169740501 169740513 TGIF2 JASPAR yes 70758562
chr5 169740501 169740514 ZBTB18 JASPAR yes 67683626
chr5 169740501 169740514 ZBTB18 JASPAR yes 70758563
chr5 169740502 169740512 NEUROG2 JASPAR yes 67683627
chr5 169740502 169740512 NEUROG2 JASPAR yes 70758564
chr5 169740507 169740511 NFE TRANSFAC yes 67683628
chr5 169740507 169740511 NFE TRANSFAC yes 70758565
chr5 169740507 169740525 SRF JASPAR yes 67683629
chr5 169740507 169740525 SRF JASPAR yes 70758566
chr5 169740510 169740522 SRF JASPAR yes 67683630
chr5 169740510 169740522 SRF JASPAR yes 70758567
chr5 169740513 169740517 YY1 TRANSFAC yes 67683631
chr5 169740513 169740517 YY1 TRANSFAC yes 70758568
chr5 169740539 169740557 NFYA JASPAR yes 67683632
chr5 169740539 169740557 NFYA JASPAR yes 70758569
chr5 169740542 169740558 NFYA JASPAR yes 67683633
chr5 169740542 169740558 NFYA JASPAR yes 70758570
chr5 169740545 169740560 NFYB JASPAR yes 67683634
chr5 169740545 169740560 NFYB JASPAR yes 70758571
chr5 169740547 169740552 NFY TRANSFAC yes 67683635
chr5 169740547 169740552 NFY TRANSFAC yes 70758572
chr5 169740558 169740570 NHLH1 JASPAR yes 67683636
chr5 169740558 169740570 NHLH1 JASPAR yes 70758573
chr5 169740559 169740569 MSC JASPAR yes 67683637
chr5 169740559 169740569 NHLH1 JASPAR yes 67683638
chr5 169740559 169740569 TFAP4 JASPAR yes 67683639
chr5 169740559 169740569 MSC JASPAR yes 70758574
chr5 169740559 169740569 NHLH1 JASPAR yes 70758575
chr5 169740559 169740569 TFAP4 JASPAR yes 70758576
chr5 169740564 169740582 NFYA JASPAR yes 67683640
chr5 169740564 169740582 NFYA JASPAR yes 70758577
chr5 169740567 169740583 NFYA JASPAR yes 67683641
chr5 169740567 169740583 NFYA JASPAR yes 70758578
chr5 169740570 169740585 NFYB JASPAR yes 67683642
chr5 169740570 169740585 NFYB JASPAR yes 70758579
chr5 169740572 169740577 NFY TRANSFAC yes 67683643
chr5 169740572 169740577 NFY TRANSFAC yes 70758580
chr5 169740589 169740593 YY1 TRANSFAC yes 67683644
chr5 169740589 169740593 YY1 TRANSFAC yes 70758581
chr5 169740611 169740632 IRF1 JASPAR yes 67683645
chr5 169740611 169740632 IRF1 JASPAR yes 70758582
chr5 169740613 169740628 STAT2 JASPAR yes 67683646
chr5 169740613 169740628 STAT2 JASPAR yes 70758583
chr5 169740614 169740628 STAT1 JASPAR yes 67683647
chr5 169740614 169740628 STAT1 JASPAR yes 70758584
chr5 169740615 169740627 IRF1 JASPAR yes 67683648
chr5 169740615 169740627 IRF1 JASPAR yes 70758585
chr5 169740615 169740629 IRF7 JASPAR yes 67683649
chr5 169740615 169740629 IRF8 JASPAR yes 67683650
chr5 169740615 169740629 IRF7 JASPAR yes 70758586
chr5 169740615 169740629 IRF8 JASPAR yes 70758587
chr5 169740615 169740630 IRF9 JASPAR yes 67683651
chr5 169740615 169740630 IRF9 JASPAR yes 70758588
chr5 169740621 169740636 FOXA1 JASPAR yes 67683652
chr5 169740621 169740636 FOXA1 JASPAR yes 70758589
chr5 169740622 169740634 FOXI1 JASPAR yes 67683653
chr5 169740622 169740634 FOXI1 JASPAR yes 70758590
chr5 169740622 169740637 FOXP1 JASPAR yes 67683654
chr5 169740622 169740637 FOXP1 JASPAR yes 70758591
chr5 169740623 169740634 FOXP2 JASPAR yes 67683655
chr5 169740623 169740634 FOXP2 JASPAR yes 70758592
chr5 169740623 169740635 FOXC2 JASPAR yes 67683656
chr5 169740623 169740635 FOXC2 JASPAR yes 70758593
chr5 169740624 169740632 FOXG1 JASPAR yes 67683657
chr5 169740624 169740632 FOXO3 JASPAR yes 67683658
chr5 169740624 169740632 FOXG1 JASPAR yes 70758594
chr5 169740624 169740632 FOXO3 JASPAR yes 70758595
chr5 169740624 169740635 FOXB1 JASPAR yes 67683659
chr5 169740624 169740635 FOXC1 JASPAR yes 67683660
chr5 169740624 169740635 FOXB1 JASPAR yes 70758596
chr5 169740624 169740635 FOXC1 JASPAR yes 70758597
chr5 169740647 169740663 POU4F2 JASPAR yes 67683661
chr5 169740647 169740663 POU4F2 JASPAR yes 70758598
chr5 169740653 169740670 BCL6B JASPAR yes 67683662
chr5 169740653 169740670 BCL6B JASPAR yes 70758599
chr5 169740659 169740665 PEA3 TRANSFAC yes 67683663
chr5 169740659 169740665 PEA3 TRANSFAC yes 70758600
chr5 169740662 169740677 HNF4G JASPAR yes 67683664
chr5 169740662 169740677 HNF4G JASPAR yes 70758601
chr5 169740663 169740678 HNF4A JASPAR yes 67683665
chr5 169740663 169740678 HNF4A JASPAR yes 70758602
chr5 169740666 169740672 TCF1 TRANSFAC yes 67683666
chr5 169740666 169740672 TCF1 TRANSFAC yes 70758603
chr5 169740679 169740692 ELF1 JASPAR yes 67683667
chr5 169740679 169740692 ELF1 JASPAR yes 70758604
chr5 169740695 169740699 YY1 TRANSFAC yes 67683668
chr5 169740695 169740699 YY1 TRANSFAC yes 70758605
chr5 169740704 169740719 RUNX2 JASPAR yes 67683669
chr5 169740704 169740719 RUNX2 JASPAR yes 70758606
chr5 169740707 169740713 SOX10 JASPAR yes 67683670
chr5 169740707 169740713 SOX10 JASPAR yes 70758607
chr5 169740707 169740718 RUNX1 JASPAR yes 67683671
chr5 169740707 169740718 RUNX1 JASPAR yes 70758608
chr5 169740708 169740718 RUNX3 JASPAR yes 67683672
chr5 169740708 169740718 RUNX3 JASPAR yes 70758609
chr5 169740709 169740718 RUNX2 JASPAR yes 67683673
chr5 169740709 169740718 RUNX2 JASPAR yes 70758610
chr5 169740746 169740758 MEF2B JASPAR yes 67683674
chr5 169740746 169740758 MEF2B JASPAR yes 70758611
chr5 169740753 169740774 REST JASPAR yes 67683675
chr5 169740753 169740774 REST JASPAR yes 70758612
chr5 169740761 169740771 MAX JASPAR yes 67683676
chr5 169740761 169740771 MAX JASPAR yes 70758613
SNP sites on vista50075[chr5:169740418-169740772]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 169740509 rs6888770 T C
NEUROG2 NFE PKNOX1 PKNOX2 SRF TGIF1 TGIF2 ZBTB18
8690179
chr5 169740510 rs185104612 G T
NEUROG2 NFE PKNOX1 PKNOX2 SRF TGIF1 TGIF2 ZBTB18
8690180
chr5 169740545 rs553189990 C T
NFYA NFYB
8690181
chr5 169740566 rs573042798 T C
MSC NFYA NHLH1 TFAP4
8690182
chr5 169740734 rs182582999 A G no 8690183
chr5 169740769 rs529543050 G A,T
MAX REST
8690184
Genes possibly regulated by vista50075[chr5:169740418-169740772]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 169659451 169679579 + C5orf58 ENSG00000234511.4 169659451 0.96 0.96 5967 19033
chr5 169673241 169725231 - LCP2 ENSG00000043462.7 169725231 0.94 1.0 5968 84813
chr5 169780491 170163636 + KCNIP1 ENSG00000182132.8 169780491 0.97 0.99 5969 60281
chr5 169801675 169816681 - KCNMB1 ENSG00000145936.4 169816681 0.92 0.99 5970 24091
Expression level of Genes
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miRNAs possibly regulated by vista50075[chr5:169740418-169740772]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results