EnhancerDB
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  3. vista50078[chr5:169742286-169742596]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50078[chr5:169742286-169742596]
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Tissue distribution of vista50078
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Transcription factor that possibly regulate vista50078[chr5:169742286-169742596]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 169742287 169742298 FLI1 JASPAR yes 67683869
chr5 169742287 169742298 FLI1 JASPAR yes 70758649
chr5 169742288 169742301 ELF1 JASPAR yes 67683870
chr5 169742288 169742301 ELF1 JASPAR yes 70758650
chr5 169742289 169742296 SPI1 JASPAR yes 67683871
chr5 169742289 169742296 SPI1 JASPAR yes 70758651
chr5 169742289 169742297 FEV JASPAR yes 67683872
chr5 169742289 169742297 FEV JASPAR yes 70758652
chr5 169742291 169742296 ETS2 TRANSFAC yes 67683873
chr5 169742291 169742296 ETS2 TRANSFAC yes 70758653
chr5 169742293 169742308 TFAP2A JASPAR yes 67683874
chr5 169742293 169742308 TFAP2A JASPAR yes 70758654
chr5 169742295 169742310 TFAP2C JASPAR yes 67683875
chr5 169742295 169742310 TFAP2C JASPAR yes 70758655
chr5 169742308 169742312 YY1 TRANSFAC yes 67683876
chr5 169742308 169742312 YY1 TRANSFAC yes 70758656
chr5 169742326 169742341 FOXP1 JASPAR yes 67683877
chr5 169742326 169742341 FOXP1 JASPAR yes 70758657
chr5 169742329 169742337 FOXO3 JASPAR yes 67683878
chr5 169742329 169742337 FOXO3 JASPAR yes 70758658
chr5 169742330 169742340 NFATC3 JASPAR yes 67683879
chr5 169742330 169742340 NFATC3 JASPAR yes 70758659
chr5 169742331 169742338 NFATC2 JASPAR yes 67683880
chr5 169742331 169742338 NFATC2 JASPAR yes 70758660
chr5 169742336 169742340 YY1 TRANSFAC yes 67683881
chr5 169742336 169742340 YY1 TRANSFAC yes 70758661
chr5 169742350 169742356 NFIC JASPAR yes 67683882
chr5 169742350 169742356 NFIC JASPAR yes 70758662
chr5 169742351 169742362 CDX2 JASPAR yes 67683883
chr5 169742351 169742362 CDX2 JASPAR yes 70758663
chr5 169742352 169742363 HOXA10 JASPAR yes 67683884
chr5 169742352 169742363 HOXA10 JASPAR yes 70758664
chr5 169742353 169742362 CDX1 JASPAR yes 67683885
chr5 169742353 169742362 CDX1 JASPAR yes 70758665
chr5 169742353 169742363 HOXA13 JASPAR yes 67683886
chr5 169742353 169742363 HOXB13 JASPAR yes 67683887
chr5 169742353 169742363 HOXD13 JASPAR yes 67683888
chr5 169742353 169742363 HOXA13 JASPAR yes 70758666
chr5 169742353 169742363 HOXB13 JASPAR yes 70758667
chr5 169742353 169742363 HOXD13 JASPAR yes 70758668
chr5 169742394 169742400 SOX10 JASPAR yes 67683889
chr5 169742394 169742400 SOX10 JASPAR yes 70758669
chr5 169742407 169742417 MAX JASPAR yes 67683890
chr5 169742407 169742417 MAX JASPAR yes 70758670
chr5 169742408 169742418 CLOCK JASPAR yes 67683891
chr5 169742408 169742418 FIGLA JASPAR yes 67683892
chr5 169742408 169742418 MAX JASPAR yes 67683893
chr5 169742408 169742418 MLXIPL JASPAR yes 67683894
chr5 169742408 169742418 MLX JASPAR yes 67683895
chr5 169742408 169742418 MNT JASPAR yes 67683896
chr5 169742408 169742418 CLOCK JASPAR yes 70758671
chr5 169742408 169742418 FIGLA JASPAR yes 70758672
chr5 169742408 169742418 MAX JASPAR yes 70758673
chr5 169742408 169742418 MLXIPL JASPAR yes 70758674
chr5 169742408 169742418 MLX JASPAR yes 70758675
chr5 169742408 169742418 MNT JASPAR yes 70758676
chr5 169742408 169742419 USF1 JASPAR yes 67683897
chr5 169742408 169742419 USF1 JASPAR yes 70758677
chr5 169742409 169742416 USF1 JASPAR yes 67683898
chr5 169742409 169742416 USF1 JASPAR yes 70758678
chr5 169742409 169742419 MAX JASPAR yes 67683899
chr5 169742409 169742419 MAX JASPAR yes 70758679
chr5 169742410 169742415 MYC TRANSFAC yes 67683900
chr5 169742410 169742415 USF1 TRANSFAC yes 67683901
chr5 169742410 169742415 USF2 TRANSFAC yes 67683902
chr5 169742410 169742415 MYC TRANSFAC yes 70758680
chr5 169742410 169742415 USF1 TRANSFAC yes 70758681
chr5 169742410 169742415 USF2 TRANSFAC yes 70758682
chr5 169742419 169742432 SMAD2 JASPAR yes 67683903
chr5 169742419 169742432 SMAD2 JASPAR yes 70758683
chr5 169742430 169742436 SOX10 JASPAR yes 67683904
chr5 169742430 169742436 SOX10 JASPAR yes 70758684
chr5 169742462 169742480 MAFF JASPAR yes 67683905
chr5 169742462 169742480 MAFF JASPAR yes 70758685
chr5 169742464 169742475 NRL JASPAR yes 67683906
chr5 169742464 169742475 NRL JASPAR yes 70758686
chr5 169742464 169742479 MAFK JASPAR yes 67683907
chr5 169742464 169742479 MAFK JASPAR yes 70758687
chr5 169742470 169742477 JUN TRANSFAC yes 67683908
chr5 169742470 169742477 JUN TRANSFAC yes 70758688
chr5 169742485 169742496 STAT3 JASPAR yes 67683909
chr5 169742485 169742496 STAT3 JASPAR yes 70758689
chr5 169742489 169742496 ETS1 TRANSFAC yes 67683910
chr5 169742489 169742496 ETS1 TRANSFAC yes 70758690
chr5 169742498 169742501 MYB TRANSFAC yes 67683911
chr5 169742498 169742501 MYB TRANSFAC yes 70758691
chr5 169742512 169742528 POU4F2 JASPAR yes 67683912
chr5 169742512 169742528 POU4F2 JASPAR yes 70758692
chr5 169742532 169742553 ZNF263 JASPAR yes 67683913
chr5 169742532 169742553 ZNF263 JASPAR yes 70758693
chr5 169742535 169742539 YY1 TRANSFAC yes 67683914
chr5 169742535 169742539 YY1 TRANSFAC yes 70758694
chr5 169742538 169742549 E2F6 JASPAR yes 67683915
chr5 169742538 169742549 E2F6 JASPAR yes 70758695
chr5 169742581 169742592 PROP1 JASPAR yes 67683916
chr5 169742581 169742592 PROP1 JASPAR yes 70758696
chr5 169742581 169742597 POU4F2 JASPAR yes 67683917
chr5 169742581 169742597 POU4F3 JASPAR yes 67683918
chr5 169742581 169742597 POU4F2 JASPAR yes 70758697
chr5 169742581 169742597 POU4F3 JASPAR yes 70758698
chr5 169742582 169742592 PAX3 JASPAR yes 67683919
chr5 169742582 169742592 PAX7 JASPAR yes 67683920
chr5 169742582 169742592 PAX3 JASPAR yes 70758699
chr5 169742582 169742592 PAX7 JASPAR yes 70758700
chr5 169742583 169742597 POU4F1 JASPAR yes 67683921
chr5 169742583 169742597 POU4F1 JASPAR yes 70758701
chr5 169742583 169742598 HNF1A JASPAR yes 67683922
chr5 169742583 169742598 HNF1A JASPAR yes 70758702
chr5 169742584 169742594 LHX6 JASPAR yes 67683923
chr5 169742584 169742594 MNX1 JASPAR yes 67683924
chr5 169742584 169742594 POU6F1 JASPAR yes 67683925
chr5 169742584 169742594 LHX6 JASPAR yes 70758703
chr5 169742584 169742594 MNX1 JASPAR yes 70758704
chr5 169742584 169742594 POU6F1 JASPAR yes 70758705
chr5 169742584 169742597 HNF1B JASPAR yes 67683926
chr5 169742584 169742597 HNF1B JASPAR yes 70758706
chr5 169742585 169742593 LMX1A JASPAR yes 67683927
chr5 169742585 169742593 LMX1B JASPAR yes 67683928
chr5 169742585 169742593 NKX6-1 JASPAR yes 67683929
chr5 169742585 169742593 NKX6-2 JASPAR yes 67683930
chr5 169742585 169742593 VAX1 JASPAR yes 67683931
chr5 169742585 169742593 VAX2 JASPAR yes 67683932
chr5 169742585 169742593 VSX1 JASPAR yes 67683933
chr5 169742585 169742593 VSX2 JASPAR yes 67683934
chr5 169742585 169742593 LMX1A JASPAR yes 70758707
chr5 169742585 169742593 LMX1B JASPAR yes 70758708
chr5 169742585 169742593 NKX6-1 JASPAR yes 70758709
chr5 169742585 169742593 NKX6-2 JASPAR yes 70758710
chr5 169742585 169742593 VAX1 JASPAR yes 70758711
chr5 169742585 169742593 VAX2 JASPAR yes 70758712
chr5 169742585 169742593 VSX1 JASPAR yes 70758713
chr5 169742585 169742593 VSX2 JASPAR yes 70758714
chr5 169742590 169742594 YY1 TRANSFAC yes 67683935
chr5 169742590 169742594 YY1 TRANSFAC yes 70758715
SNP sites on vista50078[chr5:169742286-169742596]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 169742346 rs143002615 G A no 8690205
chr5 169742387 rs147446705 G A no 8690206
chr5 169742525 rs906356 T G
POU4F2
8690207
chr5 169742593 rs876315 T C
HNF1A HNF1B LHX6 LMX1A LMX1B MNX1 NKX6-1 NKX6-2 POU4F1 POU4F2 POU4F3 POU6F1 VAX1 VAX2 VSX1 VSX2 YY1
8690208
Genes possibly regulated by vista50078[chr5:169742286-169742596]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 169659451 169679579 + C5orf58 ENSG00000234511.4 169659451 0.96 0.96 5967 17165
chr5 169673241 169725231 - LCP2 ENSG00000043462.7 169725231 0.94 1.0 5968 82945
chr5 169780491 170163636 + KCNIP1 ENSG00000182132.8 169780491 0.97 0.99 5969 62105
chr5 169801675 169816681 - KCNMB1 ENSG00000145936.4 169816681 0.92 0.99 5970 25915
Expression level of Genes
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miRNAs possibly regulated by vista50078[chr5:169742286-169742596]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results