EnhancerDB
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  3. vista50085[chr5:169831446-169831790]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50085[chr5:169831446-169831790]
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Tissue distribution of vista50085
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Transcription factor that possibly regulate vista50085[chr5:169831446-169831790]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 169831433 169831451 MAFF JASPAR yes 67689741
chr5 169831433 169831451 MAFF JASPAR yes 70759032
chr5 169831435 169831446 NRL JASPAR yes 67689742
chr5 169831435 169831446 NRL JASPAR yes 70759033
chr5 169831435 169831450 MAFK JASPAR yes 67689743
chr5 169831435 169831450 MAFK JASPAR yes 70759034
chr5 169831509 169831513 H4TF2 TRANSFAC yes 67689744
chr5 169831509 169831513 H4TF2 TRANSFAC yes 70759035
chr5 169831509 169831523 EBF1 JASPAR yes 67689745
chr5 169831509 169831523 EBF1 JASPAR yes 70759036
chr5 169831511 169831522 EBF1 JASPAR yes 67689746
chr5 169831511 169831522 EBF1 JASPAR yes 70759037
chr5 169831516 169831521 SP1 TRANSFAC yes 67689747
chr5 169831516 169831521 SP1 TRANSFAC yes 70759038
chr5 169831530 169831540 SREBF2 JASPAR yes 67689748
chr5 169831530 169831540 SREBF2 JASPAR yes 70759039
chr5 169831531 169831543 ZBTB7B JASPAR yes 67689749
chr5 169831531 169831543 ZBTB7C JASPAR yes 67689750
chr5 169831531 169831543 ZBTB7B JASPAR yes 70759040
chr5 169831531 169831543 ZBTB7C JASPAR yes 70759041
chr5 169831532 169831544 ZBTB7A JASPAR yes 67689751
chr5 169831532 169831544 ZBTB7A JASPAR yes 70759042
chr5 169831547 169831551 NFE TRANSFAC yes 67689752
chr5 169831547 169831551 NFE TRANSFAC yes 70759043
chr5 169831554 169831567 SMAD2 JASPAR yes 67689753
chr5 169831554 169831567 SMAD2 JASPAR yes 70759044
chr5 169831556 169831564 MEIS3 JASPAR yes 67689754
chr5 169831556 169831564 MEIS3 JASPAR yes 70759045
chr5 169831567 169831578 NFE2L2 JASPAR yes 67689755
chr5 169831567 169831578 NFE2L2 JASPAR yes 70759046
chr5 169831575 169831585 NEUROG2 JASPAR yes 67689756
chr5 169831575 169831585 NEUROG2 JASPAR yes 70759047
chr5 169831576 169831586 MAX JASPAR yes 67689757
chr5 169831576 169831586 MAX JASPAR yes 70759048
chr5 169831583 169831594 STAT3 JASPAR yes 67689758
chr5 169831583 169831594 STAT3 JASPAR yes 70759049
chr5 169831592 169831602 SMAD3 JASPAR yes 67689759
chr5 169831592 169831602 SMAD3 JASPAR yes 70759050
chr5 169831604 169831619 RFX5 JASPAR yes 67689760
chr5 169831604 169831619 RFX5 JASPAR yes 70759051
chr5 169831606 169831622 RFX2 JASPAR yes 67689761
chr5 169831606 169831622 RFX3 JASPAR yes 67689762
chr5 169831606 169831622 RFX4 JASPAR yes 67689763
chr5 169831606 169831622 RFX5 JASPAR yes 67689764
chr5 169831606 169831622 RFX2 JASPAR yes 70759052
chr5 169831606 169831622 RFX3 JASPAR yes 70759053
chr5 169831606 169831622 RFX4 JASPAR yes 70759054
chr5 169831606 169831622 RFX5 JASPAR yes 70759055
chr5 169831607 169831626 RFX2 JASPAR yes 67689765
chr5 169831607 169831626 RFX2 JASPAR yes 70759056
chr5 169831635 169831656 IRF1 JASPAR yes 67689766
chr5 169831635 169831656 IRF1 JASPAR yes 70759057
chr5 169831639 169831653 SPI1 JASPAR yes 67689767
chr5 169831639 169831653 SPI1 JASPAR yes 70759058
chr5 169831667 169831671 H4TF2 TRANSFAC yes 67689768
chr5 169831667 169831671 H4TF2 TRANSFAC yes 70759059
chr5 169831678 169831690 IRF1 JASPAR yes 67689769
chr5 169831678 169831690 IRF1 JASPAR yes 70759060
chr5 169831688 169831692 NFE TRANSFAC yes 67689770
chr5 169831688 169831692 NFE TRANSFAC yes 70759061
chr5 169831699 169831717 NFYA JASPAR yes 67689771
chr5 169831699 169831717 NFYA JASPAR yes 70759062
chr5 169831702 169831706 YY1 TRANSFAC yes 67689772
chr5 169831702 169831706 YY1 TRANSFAC yes 70759063
chr5 169831702 169831718 NFYA JASPAR yes 67689773
chr5 169831702 169831718 NFYA JASPAR yes 70759064
chr5 169831704 169831716 PBX1 JASPAR yes 67689774
chr5 169831704 169831716 PBX1 JASPAR yes 70759065
chr5 169831705 169831720 NFYB JASPAR yes 67689775
chr5 169831705 169831720 NFYB JASPAR yes 70759066
chr5 169831707 169831712 NFY TRANSFAC yes 67689776
chr5 169831707 169831712 NFY TRANSFAC yes 70759067
chr5 169831711 169831715 H4TF2 TRANSFAC yes 67689777
chr5 169831711 169831715 H4TF2 TRANSFAC yes 70759068
chr5 169831748 169831763 STAT2 JASPAR yes 67689778
chr5 169831748 169831763 STAT2 JASPAR yes 70759069
chr5 169831762 169831766 YY1 TRANSFAC yes 67689779
chr5 169831762 169831766 YY1 TRANSFAC yes 70759070
chr5 169831773 169831779 PEA3 TRANSFAC yes 67689780
chr5 169831773 169831779 PEA3 TRANSFAC yes 70759071
SNP sites on vista50085[chr5:169831446-169831790]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 169831617 rs555359163 G A
RFX2 RFX3 RFX4 RFX5
8690816
chr5 169831642 rs314144 A G
IRF1 SPI1
8690817
chr5 169831686 rs314145 A G
IRF1
8690818
chr5 169831690 rs79363625 T A
IRF1 NFE
8690819
Genes possibly regulated by vista50085[chr5:169831446-169831790]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 169780491 170163636 + KCNIP1 ENSG00000182132.8 169780491 0.97 0.99 5969 49045
chr5 169801675 169816681 - KCNMB1 ENSG00000145936.4 169816681 0.92 0.99 5970 85235
Expression level of Genes
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miRNAs possibly regulated by vista50085[chr5:169831446-169831790]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results