EnhancerDB
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  3. vista50095[chr5:170172646-170172739]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50095[chr5:170172646-170172739]
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Tissue distribution of vista50095
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Transcription factor that possibly regulate vista50095[chr5:170172646-170172739]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 170172640 170172650 NKX2-3 JASPAR yes 67704269
chr5 170172640 170172650 NKX2-3 JASPAR yes 70759414
chr5 170172681 170172686 NFY TRANSFAC yes 67704270
chr5 170172681 170172686 NFY TRANSFAC yes 70759415
chr5 170172682 170172692 NFATC3 JASPAR yes 67704271
chr5 170172682 170172692 NFATC3 JASPAR yes 70759416
chr5 170172684 170172695 NFKB1 JASPAR yes 67704272
chr5 170172684 170172695 NFKB1 JASPAR yes 70759417
chr5 170172685 170172695 NFKB1 JASPAR yes 67704273
chr5 170172685 170172695 RELA JASPAR yes 67704274
chr5 170172685 170172695 REL JASPAR yes 67704275
chr5 170172685 170172695 NFKB1 JASPAR yes 70759418
chr5 170172685 170172695 RELA JASPAR yes 70759419
chr5 170172685 170172695 REL JASPAR yes 70759420
chr5 170172701 170172714 ELF1 JASPAR yes 67704276
chr5 170172701 170172714 ELF1 JASPAR yes 70759421
chr5 170172704 170172711 SPIB JASPAR yes 67704277
chr5 170172704 170172711 SPIB JASPAR yes 70759422
chr5 170172704 170172714 GABPA JASPAR yes 67704278
chr5 170172704 170172714 GABPA JASPAR yes 70759423
SNP sites on vista50095[chr5:170172646-170172739]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista50095[chr5:170172646-170172739]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 170190354 170241051 + GABRP ENSG00000094755.12 170190354 0.98 0.98 5971 82385
Expression level of Genes
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miRNAs possibly regulated by vista50095[chr5:170172646-170172739]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results