EnhancerDB
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  3. vista50096[chr5:170174489-170174734]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50096[chr5:170174489-170174734]
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Tissue distribution of vista50096
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Transcription factor that possibly regulate vista50096[chr5:170174489-170174734]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 170174502 170174521 REST JASPAR yes 67704510
chr5 170174502 170174521 REST JASPAR yes 70759424
chr5 170174506 170174525 REST JASPAR yes 67704511
chr5 170174506 170174525 REST JASPAR yes 70759425
chr5 170174513 170174524 E2F1 JASPAR yes 67704512
chr5 170174513 170174524 E2F1 JASPAR yes 70759426
chr5 170174517 170174528 NRF1 JASPAR yes 67704513
chr5 170174517 170174528 NRF1 JASPAR yes 70759427
chr5 170174521 170174527 NFE2 TRANSFAC yes 67704514
chr5 170174521 170174527 NFE2 TRANSFAC yes 70759428
chr5 170174540 170174545 GATA2 JASPAR yes 67704515
chr5 170174540 170174545 GATA2 JASPAR yes 70759429
chr5 170174543 170174547 H1TF2 TRANSFAC yes 67704516
chr5 170174543 170174547 NFE TRANSFAC yes 67704517
chr5 170174543 170174547 SRF TRANSFAC yes 67704518
chr5 170174543 170174547 H1TF2 TRANSFAC yes 70759430
chr5 170174543 170174547 NFE TRANSFAC yes 70759431
chr5 170174543 170174547 SRF TRANSFAC yes 70759432
chr5 170174546 170174555 HIC2 JASPAR yes 67704519
chr5 170174546 170174555 HIC2 JASPAR yes 70759433
chr5 170174547 170174560 TFAP2A JASPAR yes 67704520
chr5 170174547 170174560 TFAP2B JASPAR yes 67704521
chr5 170174547 170174560 TFAP2C JASPAR yes 67704522
chr5 170174547 170174560 TFAP2A JASPAR yes 70759434
chr5 170174547 170174560 TFAP2B JASPAR yes 70759435
chr5 170174547 170174560 TFAP2C JASPAR yes 70759436
chr5 170174553 170174564 FOXA1 JASPAR yes 67704523
chr5 170174553 170174564 FOXA1 JASPAR yes 70759437
chr5 170174571 170174583 TEAD1 JASPAR yes 67704524
chr5 170174571 170174583 TEAD1 JASPAR yes 70759438
chr5 170174572 170174580 TEAD3 JASPAR yes 67704525
chr5 170174572 170174580 TEAD3 JASPAR yes 70759439
chr5 170174580 170174588 MEIS2 JASPAR yes 67704526
chr5 170174580 170174588 MEIS3 JASPAR yes 67704527
chr5 170174580 170174588 MEIS2 JASPAR yes 70759440
chr5 170174580 170174588 MEIS3 JASPAR yes 70759441
chr5 170174581 170174585 NFE TRANSFAC yes 67704528
chr5 170174581 170174585 NFE TRANSFAC yes 70759442
chr5 170174605 170174611 TCF4 TRANSFAC yes 67704529
chr5 170174605 170174611 TCF4 TRANSFAC yes 70759443
chr5 170174635 170174639 YY1 TRANSFAC yes 67704530
chr5 170174635 170174639 YY1 TRANSFAC yes 70759444
chr5 170174638 170174641 MYB TRANSFAC yes 67704531
chr5 170174638 170174641 MYB TRANSFAC yes 70759445
chr5 170174642 170174657 RUNX2 JASPAR yes 67704532
chr5 170174642 170174657 RUNX2 JASPAR yes 70759446
chr5 170174643 170174657 CREB3L1 JASPAR yes 67704533
chr5 170174643 170174657 CREB3L1 JASPAR yes 70759447
chr5 170174647 170174663 POU4F3 JASPAR yes 67704534
chr5 170174647 170174663 POU4F3 JASPAR yes 70759448
chr5 170174674 170174678 YY1 TRANSFAC yes 67704535
chr5 170174674 170174678 YY1 TRANSFAC yes 70759449
chr5 170174706 170174712 TCF4 TRANSFAC yes 67704536
chr5 170174706 170174712 TCF4 TRANSFAC yes 70759450
chr5 170174730 170174736 TCF1 TRANSFAC yes 67704537
chr5 170174730 170174736 TCF1 TRANSFAC yes 70759451
SNP sites on vista50096[chr5:170174489-170174734]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 170174498 rs79528739 G A no 8692405
chr5 170174653 rs151295127 C G
CREB3L1 POU4F3 RUNX2
8692406
chr5 170174699 rs17673687 C A no 8692407
Genes possibly regulated by vista50096[chr5:170174489-170174734]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 170190354 170241051 + GABRP ENSG00000094755.12 170190354 0.98 0.98 5971 84380
Expression level of Genes
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miRNAs possibly regulated by vista50096[chr5:170174489-170174734]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results