EnhancerDB
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  3. vista5011[chr1:212715990-212716583]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5011[chr1:212715990-212716583]
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Tissue distribution of vista5011
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Transcription factor that possibly regulate vista5011[chr1:212715990-212716583]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 212715993 212716001 ISL2 JASPAR yes 118453752
chr1 212715993 212716002 NKX3-2 JASPAR yes 118453753
chr1 212716001 212716012 FOXC1 JASPAR yes 118453754
chr1 212716002 212716013 FOXP2 JASPAR yes 118453755
chr1 212716003 212716007 TEAD2 TRANSFAC yes 118453756
chr1 212716003 212716008 TBP TRANSFAC yes 118453757
chr1 212716004 212716012 FOXG1 JASPAR yes 118453758
chr1 212716004 212716012 FOXO3 JASPAR yes 118453759
chr1 212716015 212716030 NFYB JASPAR yes 118453760
chr1 212716017 212716022 NFY TRANSFAC yes 118453761
chr1 212716033 212716036 MYB TRANSFAC yes 118453762
chr1 212716041 212716049 EHF JASPAR yes 118453763
chr1 212716052 212716056 YY1 TRANSFAC yes 118453764
chr1 212716064 212716078 NR2F1 JASPAR yes 118453765
chr1 212716103 212716109 MZF1 JASPAR yes 118453766
chr1 212716113 212716116 MYB TRANSFAC yes 118453767
chr1 212716135 212716146 EBF1 JASPAR yes 118453768
chr1 212716141 212716154 SMAD2 JASPAR yes 118453769
chr1 212716153 212716162 ZEB1 JASPAR yes 118453770
chr1 212716153 212716168 SCRT1 JASPAR yes 118453771
chr1 212716154 212716164 FIGLA JASPAR yes 118453772
chr1 212716154 212716164 TCF3 JASPAR yes 118453773
chr1 212716154 212716164 TCF4 JASPAR yes 118453774
chr1 212716155 212716164 SNAI2 JASPAR yes 118453775
chr1 212716156 212716161 USF2 TRANSFAC yes 118453776
chr1 212716157 212716163 PTF TRANSFAC yes 118453777
chr1 212716168 212716186 ESR1 JASPAR yes 118453778
chr1 212716209 212716217 FOXC1 JASPAR yes 118453779
chr1 212716218 212716228 HINFP JASPAR yes 118453780
chr1 212716229 212716246 ZNF410 JASPAR yes 118453781
chr1 212716231 212716249 SRF JASPAR yes 118453782
chr1 212716233 212716249 SRF JASPAR yes 118453783
chr1 212716233 212716251 SRF JASPAR yes 118453784
chr1 212716234 212716246 SRF JASPAR yes 118453785
chr1 212716236 212716248 SRF JASPAR yes 118453786
chr1 212716248 212716263 PRDM1 JASPAR yes 118453787
chr1 212716249 212716253 YY1 TRANSFAC yes 118453788
chr1 212716249 212716263 STAT1 JASPAR yes 118453789
chr1 212716249 212716270 ZNF263 JASPAR yes 118453790
chr1 212716251 212716272 IRF1 JASPAR yes 118453791
chr1 212716253 212716258 ETS2 TRANSFAC yes 118453792
chr1 212716253 212716268 PRDM1 JASPAR yes 118453793
chr1 212716258 212716279 ZNF263 JASPAR yes 118453794
chr1 212716260 212716274 SPIC JASPAR yes 118453795
chr1 212716263 212716270 SPIB JASPAR yes 118453796
chr1 212716272 212716277 ETS2 TRANSFAC yes 118453797
chr1 212716273 212716284 NFIL3 JASPAR yes 118453798
chr1 212716275 212716287 POU2F1 JASPAR yes 118453799
chr1 212716275 212716290 FOXP1 JASPAR yes 118453800
chr1 212716276 212716288 POU3F1 JASPAR yes 118453801
chr1 212716276 212716288 POU3F2 JASPAR yes 118453802
chr1 212716276 212716289 POU2F2 JASPAR yes 118453803
chr1 212716277 212716285 FOXL1 JASPAR yes 118453804
chr1 212716277 212716286 POU5F1B JASPAR yes 118453805
chr1 212716281 212716287 TBP TRANSFAC yes 118453806
chr1 212716283 212716299 SOX8 JASPAR yes 118453807
chr1 212716287 212716301 STAT1 JASPAR yes 118453808
chr1 212716289 212716310 IRF1 JASPAR yes 118453809
chr1 212716291 212716306 PRDM1 JASPAR yes 118453810
chr1 212716300 212716306 SOX10 JASPAR yes 118453811
chr1 212716313 212716317 YY1 TRANSFAC yes 118453812
chr1 212716314 212716332 IRF2 JASPAR yes 118453813
chr1 212716315 212716336 IRF1 JASPAR yes 118453814
chr1 212716317 212716332 PRDM1 JASPAR yes 118453815
chr1 212716317 212716332 STAT2 JASPAR yes 118453816
chr1 212716318 212716332 STAT1 JASPAR yes 118453817
chr1 212716319 212716331 IRF1 JASPAR yes 118453818
chr1 212716319 212716334 IRF9 JASPAR yes 118453819
chr1 212716324 212716328 YY1 TRANSFAC yes 118453820
chr1 212716326 212716344 SRF JASPAR yes 118453821
chr1 212716327 212716345 SRF JASPAR yes 118453822
chr1 212716331 212716335 YY1 TRANSFAC yes 118453823
chr1 212716363 212716384 ZNF263 JASPAR yes 118453824
chr1 212716374 212716393 PAX5 JASPAR yes 118453825
chr1 212716383 212716387 YY1 TRANSFAC yes 118453826
chr1 212716397 212716403 ZNF354C JASPAR yes 118453827
chr1 212716403 212716417 RORA JASPAR yes 118453828
chr1 212716407 212716428 IRF1 JASPAR yes 118453829
chr1 212716409 212716424 STAT2 JASPAR yes 118453830
chr1 212716410 212716424 SPI1 JASPAR yes 118453831
chr1 212716410 212716424 STAT1 JASPAR yes 118453832
chr1 212716411 212716425 IRF8 JASPAR yes 118453833
chr1 212716423 212716444 IRF1 JASPAR yes 118453834
chr1 212716431 212716436 ETS2 TRANSFAC yes 118453835
chr1 212716434 212716440 SOX10 JASPAR yes 118453836
chr1 212716435 212716456 IRF1 JASPAR yes 118453837
chr1 212716437 212716452 STAT2 JASPAR yes 118453838
chr1 212716438 212716452 STAT1 JASPAR yes 118453839
chr1 212716439 212716451 IRF1 JASPAR yes 118453840
chr1 212716439 212716454 IRF9 JASPAR yes 118453841
chr1 212716446 212716462 SRF JASPAR yes 118453842
chr1 212716446 212716464 SRF JASPAR yes 118453843
chr1 212716447 212716452 ETS2 TRANSFAC yes 118453844
chr1 212716447 212716459 SRF JASPAR yes 118453845
chr1 212716480 212716496 SRF JASPAR yes 118453846
chr1 212716495 212716509 SPI1 JASPAR yes 118453847
chr1 212716495 212716509 SPIC JASPAR yes 118453848
chr1 212716498 212716513 LEF1 JASPAR yes 118453849
chr1 212716498 212716516 SRF JASPAR yes 118453850
chr1 212716505 212716511 TCF4 TRANSFAC yes 118453851
chr1 212716543 212716554 DMRT3 JASPAR yes 118453852
chr1 212716551 212716562 FOXB1 JASPAR yes 118453853
chr1 212716555 212716562 NKX3-1 JASPAR yes 118453854
chr1 212716573 212716579 ETS1 JASPAR yes 118453855
SNP sites on vista5011[chr1:212715990-212716583]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 212716033 rs616408 G A
MYB
923895
chr1 212716160 rs574295564 C G
FIGLA PTF SCRT1 SNAI2 TCF3 TCF4 USF2 ZEB1
923896
chr1 212716168 rs541621079 G A
ESR1 SCRT1
923897
chr1 212716338 rs4951611 G T
SRF
923898
chr1 212716491 rs17666978 T C
SRF
923899
chr1 212716500 rs578058674 TC T
LEF1 SPI1 SPIC SRF
923900
chr1 212716579 rs11119967 G A
ETS1
923901
Genes possibly regulated by vista5011[chr1:212715990-212716583]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 212738676 212794119 + ATF3 ENSG00000162772.12 212738676 0.8 1.0 1828 77907
chr1 212797789 212800120 + FAM71A ENSG00000162771.6 212797789 0.96 1.0 1829 18794
Expression level of Genes
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miRNAs possibly regulated by vista5011[chr1:212715990-212716583]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results