EnhancerDB
  1. Home
  2. Enhancers
  3. vista50114[chr5:171388246-171388386]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50114[chr5:171388246-171388386]
Back to top
Tissue distribution of vista50114
Back to top
Transcription factor that possibly regulate vista50114[chr5:171388246-171388386]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 171388156 171388499 NFATC1 UCSC Txn Factor no Conserved 108537422
chr5 171388229 171388483 RUNX3 UCSC Txn Factor no Conserved 108537423
chr5 171388233 171388246 JUN JASPAR yes 67750859
chr5 171388233 171388246 JUN JASPAR yes 70760061
chr5 171388234 171388247 ATF4 JASPAR yes 67750860
chr5 171388234 171388247 ATF4 JASPAR yes 70760062
chr5 171388235 171388246 CEBPA JASPAR yes 67750861
chr5 171388235 171388246 CEBPA JASPAR yes 70760063
chr5 171388236 171388247 CEBPB JASPAR yes 67750862
chr5 171388236 171388247 CEBPB JASPAR yes 70760064
chr5 171388246 171388252 NFIC JASPAR yes 67750863
chr5 171388246 171388252 NFIC JASPAR yes 70760065
chr5 171388248 171388252 H1TF2 TRANSFAC yes 67750864
chr5 171388248 171388252 NFE TRANSFAC yes 67750865
chr5 171388248 171388252 SRF TRANSFAC yes 67750866
chr5 171388248 171388252 H1TF2 TRANSFAC yes 70760066
chr5 171388248 171388252 NFE TRANSFAC yes 70760067
chr5 171388248 171388252 SRF TRANSFAC yes 70760068
chr5 171388254 171388272 NFYA JASPAR yes 67750867
chr5 171388254 171388272 NFYA JASPAR yes 70760069
chr5 171388282 171388292 SREBF2 JASPAR yes 67750868
chr5 171388282 171388292 SREBF2 JASPAR yes 70760070
chr5 171388296 171388306 NFKB1 JASPAR yes 67750869
chr5 171388296 171388306 REL JASPAR yes 67750870
chr5 171388296 171388306 NFKB1 JASPAR yes 70760071
chr5 171388296 171388306 REL JASPAR yes 70760072
chr5 171388296 171388317 IRF1 JASPAR yes 67750871
chr5 171388296 171388317 IRF1 JASPAR yes 70760073
chr5 171388299 171388313 SPI1 JASPAR yes 67750872
chr5 171388299 171388313 SPI1 JASPAR yes 70760074
chr5 171388300 171388314 IRF8 JASPAR yes 67750873
chr5 171388300 171388314 IRF8 JASPAR yes 70760075
chr5 171388318 171388330 IRF1 JASPAR yes 67750874
chr5 171388318 171388330 IRF1 JASPAR yes 70760076
chr5 171388320 171388335 FOXP1 JASPAR yes 67750875
chr5 171388320 171388335 FOXP1 JASPAR yes 70760077
chr5 171388323 171388331 FOXO3 JASPAR yes 67750876
chr5 171388323 171388331 FOXO3 JASPAR yes 70760078
chr5 171388324 171388334 NFATC3 JASPAR yes 67750877
chr5 171388324 171388334 NFATC3 JASPAR yes 70760079
chr5 171388325 171388332 NFATC2 JASPAR yes 67750878
chr5 171388325 171388332 NFATC2 JASPAR yes 70760080
chr5 171388330 171388334 YY1 TRANSFAC yes 67750879
chr5 171388330 171388334 YY1 TRANSFAC yes 70760081
chr5 171388373 171388394 IRF1 JASPAR yes 67750880
chr5 171388373 171388394 IRF1 JASPAR yes 70760082
chr5 171388377 171388390 EOMES JASPAR yes 67750881
chr5 171388377 171388390 EOMES JASPAR yes 70760083
chr5 171388379 171388389 TBR1 JASPAR yes 67750882
chr5 171388379 171388389 TBR1 JASPAR yes 70760084
chr5 171388379 171388390 TBX20 JASPAR yes 67750883
chr5 171388379 171388390 TBX2 JASPAR yes 67750884
chr5 171388379 171388390 TBX20 JASPAR yes 70760085
chr5 171388379 171388390 TBX2 JASPAR yes 70760086
chr5 171388385 171388400 HNF1A JASPAR yes 67750885
chr5 171388385 171388400 HNF1A JASPAR yes 70760087
SNP sites on vista50114[chr5:171388246-171388386]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 171388346 rs116863020 C T
NFATC1 RUNX3
8697042
Genes possibly regulated by vista50114[chr5:171388246-171388386]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 171288553 171433877 - FBXW11 ENSG00000072803.13 171433877 0.66 0.99 5978 54509
Expression level of Genes
Back to top
miRNAs possibly regulated by vista50114[chr5:171388246-171388386]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results