EnhancerDB
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  3. vista50118[chr5:171505010-171505317]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50118[chr5:171505010-171505317]
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Tissue distribution of vista50118
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Transcription factor that possibly regulate vista50118[chr5:171505010-171505317]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 171505019 171505023 NFE TRANSFAC yes 67760983
chr5 171505019 171505023 NFE TRANSFAC yes 70760262
chr5 171505026 171505040 ZIC1 JASPAR yes 67760984
chr5 171505026 171505040 ZIC1 JASPAR yes 70760263
chr5 171505026 171505041 ZIC3 JASPAR yes 67760985
chr5 171505026 171505041 ZIC3 JASPAR yes 70760264
chr5 171505057 171505068 ESRRA JASPAR yes 67760986
chr5 171505057 171505068 ESRRB JASPAR yes 67760987
chr5 171505057 171505068 ESRRA JASPAR yes 70760265
chr5 171505057 171505068 ESRRB JASPAR yes 70760266
chr5 171505059 171505077 RARA JASPAR yes 67760988
chr5 171505059 171505077 RARA JASPAR yes 70760267
chr5 171505061 171505065 LFA1 TRANSFAC yes 67760989
chr5 171505061 171505065 LFA1 TRANSFAC yes 70760268
chr5 171505083 171505100 BCL6B JASPAR yes 67760990
chr5 171505083 171505100 BCL6B JASPAR yes 70760269
chr5 171505098 171505119 ZNF263 JASPAR yes 67760991
chr5 171505098 171505119 ZNF263 JASPAR yes 70760270
chr5 171505100 171505110 ETV6 JASPAR yes 67760992
chr5 171505100 171505110 ETV6 JASPAR yes 70760271
chr5 171505100 171505113 ELF1 JASPAR yes 67760993
chr5 171505100 171505113 ELF1 JASPAR yes 70760272
chr5 171505101 171505108 SPI1 JASPAR yes 67760994
chr5 171505101 171505108 SPI1 JASPAR yes 70760273
chr5 171505101 171505109 EHF JASPAR yes 67760995
chr5 171505101 171505109 EHF JASPAR yes 70760274
chr5 171505133 171505146 NR2F1 JASPAR yes 67760996
chr5 171505133 171505146 NR2F1 JASPAR yes 70760275
chr5 171505135 171505146 ESRRA JASPAR yes 67760997
chr5 171505135 171505146 ESRRA JASPAR yes 70760276
chr5 171505136 171505144 NR4A2 JASPAR yes 67760998
chr5 171505136 171505144 NR4A2 JASPAR yes 70760277
chr5 171505136 171505151 HNF4A JASPAR yes 67760999
chr5 171505136 171505151 HNF4A JASPAR yes 70760278
chr5 171505137 171505151 NR2F1 JASPAR yes 67761000
chr5 171505137 171505151 RXRB JASPAR yes 67761001
chr5 171505137 171505151 RXRG JASPAR yes 67761002
chr5 171505137 171505151 NR2F1 JASPAR yes 70760279
chr5 171505137 171505151 RXRB JASPAR yes 70760280
chr5 171505137 171505151 RXRG JASPAR yes 70760281
chr5 171505137 171505152 HNF4G JASPAR yes 67761003
chr5 171505137 171505152 HNF4G JASPAR yes 70760282
chr5 171505197 171505203 YY1 JASPAR yes 67761004
chr5 171505197 171505203 YY1 JASPAR yes 70760283
chr5 171505205 171505210 GATA2 JASPAR yes 67761005
chr5 171505205 171505210 GATA2 JASPAR yes 70760284
chr5 171505211 171505230 RFX2 JASPAR yes 67761006
chr5 171505211 171505230 RFX2 JASPAR yes 70760285
chr5 171505213 171505228 RFX5 JASPAR yes 67761007
chr5 171505213 171505228 RFX5 JASPAR yes 70760286
chr5 171505240 171505254 TLX1 JASPAR yes 67761008
chr5 171505240 171505254 TLX1 JASPAR yes 70760287
chr5 171505241 171505255 TLX1 JASPAR yes 67761009
chr5 171505241 171505255 TLX1 JASPAR yes 70760288
chr5 171505250 171505256 YY1 JASPAR yes 67761010
chr5 171505250 171505256 YY1 JASPAR yes 70760289
chr5 171505259 171505270 NFIL3 JASPAR yes 67761011
chr5 171505259 171505270 NFIL3 JASPAR yes 70760290
chr5 171505260 171505272 DBP JASPAR yes 67761012
chr5 171505260 171505272 HLF JASPAR yes 67761013
chr5 171505260 171505272 TEF JASPAR yes 67761014
chr5 171505260 171505272 DBP JASPAR yes 70760291
chr5 171505260 171505272 HLF JASPAR yes 70760292
chr5 171505260 171505272 TEF JASPAR yes 70760293
chr5 171505267 171505274 NKX3-1 JASPAR yes 67761015
chr5 171505267 171505274 NKX3-1 JASPAR yes 70760294
SNP sites on vista50118[chr5:171505010-171505317]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 171505038 rs11956121 G C
ZIC1 ZIC3
8697885
chr5 171505045 rs10069309 C A no 8697886
chr5 171505275 rs78407861 A G no 8697887
Genes possibly regulated by vista50118[chr5:171505010-171505317]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 171288553 171433877 - FBXW11 ENSG00000072803.13 171433877 0.66 0.99 5978 28867
Expression level of Genes
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miRNAs possibly regulated by vista50118[chr5:171505010-171505317]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results