EnhancerDB
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  3. vista5012[chr1:212723252-212723516]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5012[chr1:212723252-212723516]
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Tissue distribution of vista5012
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Transcription factor that possibly regulate vista5012[chr1:212723252-212723516]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 212723253 212723256 MYB TRANSFAC yes 118453856
chr1 212723266 212723271 SP1 TRANSFAC yes 118453857
chr1 212723266 212723280 PLAG1 JASPAR yes 118453858
chr1 212723290 212723311 IRF1 JASPAR yes 118453859
chr1 212723293 212723307 IRF7 JASPAR yes 118453860
chr1 212723294 212723308 STAT1 JASPAR yes 118453861
chr1 212723294 212723309 STAT2 JASPAR yes 118453862
chr1 212723294 212723312 IRF2 JASPAR yes 118453863
chr1 212723302 212723308 HiNF-A TRANSFAC yes 118453864
chr1 212723344 212723357 POU2F2 JASPAR yes 118453865
chr1 212723368 212723382 EBF1 JASPAR yes 118453866
chr1 212723371 212723382 STAT3 JASPAR yes 118453867
chr1 212723392 212723397 GATA2 JASPAR yes 118453868
chr1 212723395 212723406 CEBPA JASPAR yes 118453869
chr1 212723395 212723407 DBP JASPAR yes 118453870
chr1 212723395 212723407 HLF JASPAR yes 118453871
chr1 212723395 212723407 TEF JASPAR yes 118453872
chr1 212723396 212723406 CEBPB JASPAR yes 118453873
chr1 212723396 212723406 CEBPD JASPAR yes 118453874
chr1 212723396 212723406 CEBPE JASPAR yes 118453875
chr1 212723396 212723406 CEBPG JASPAR yes 118453876
chr1 212723396 212723407 CEBPB JASPAR yes 118453877
chr1 212723411 212723420 HIC2 JASPAR yes 118453878
chr1 212723414 212723418 LFA1 TRANSFAC yes 118453879
chr1 212723419 212723423 YY1 TRANSFAC yes 118453880
chr1 212723449 212723462 SMAD2 JASPAR yes 118453881
chr1 212723466 212723472 YY1 JASPAR yes 118453882
chr1 212723504 212723508 YY1 TRANSFAC yes 118453883
SNP sites on vista5012[chr1:212723252-212723516]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 212723278 rs530857295 G A
PLAG1
923963
chr1 212723355 rs180735132 T A
POU2F2
923964
chr1 212723379 rs368866794 G A
EBF1 STAT3
923965
chr1 212723451 rs139128896 C A
SMAD2
923966
chr1 212723496 rs556847 A C no 923967
Genes possibly regulated by vista5012[chr1:212723252-212723516]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 212738676 212794119 + ATF3 ENSG00000162772.12 212738676 0.8 1.0 1828 84840
chr1 212797789 212800120 + FAM71A ENSG00000162771.6 212797789 0.96 1.0 1829 25727
Expression level of Genes
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miRNAs possibly regulated by vista5012[chr1:212723252-212723516]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results