EnhancerDB
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  3. vista50122[chr5:171556459-171556821]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50122[chr5:171556459-171556821]
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Tissue distribution of vista50122
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Transcription factor that possibly regulate vista50122[chr5:171556459-171556821]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 171556454 171556471 RARA JASPAR yes 67765357
chr5 171556454 171556471 RARA JASPAR yes 70760413
chr5 171556454 171556471 RARA JASPAR yes 70760414
chr5 171556465 171556479 RXRB JASPAR yes 67765358
chr5 171556465 171556479 RXRG JASPAR yes 67765359
chr5 171556465 171556479 RXRB JASPAR yes 70760415
chr5 171556465 171556479 RXRG JASPAR yes 70760416
chr5 171556468 171556476 MEIS3 JASPAR yes 67765360
chr5 171556468 171556476 MEIS3 JASPAR yes 70760417
chr5 171556469 171556473 NFE TRANSFAC yes 67765361
chr5 171556469 171556473 NFE TRANSFAC yes 70760418
chr5 171556470 171556487 PAX1 JASPAR yes 67765362
chr5 171556470 171556487 PAX1 JASPAR yes 70760419
chr5 171556483 171556501 MAFF JASPAR yes 67765363
chr5 171556483 171556501 MAFF JASPAR yes 70760420
chr5 171556484 171556499 MAFK JASPAR yes 67765364
chr5 171556484 171556499 MAFK JASPAR yes 70760421
chr5 171556494 171556500 HiNF-A TRANSFAC yes 67765365
chr5 171556494 171556500 HiNF-A TRANSFAC yes 70760422
chr5 171556528 171556533 ETS2 TRANSFAC yes 67765366
chr5 171556528 171556533 ETS2 TRANSFAC yes 70760423
chr5 171556537 171556548 FLI1 JASPAR yes 67765367
chr5 171556537 171556548 FLI1 JASPAR yes 70760424
chr5 171556538 171556548 ETV6 JASPAR yes 67765368
chr5 171556538 171556548 ETV6 JASPAR yes 70760425
chr5 171556538 171556549 ELF5 JASPAR yes 67765369
chr5 171556538 171556549 ELF5 JASPAR yes 70760426
chr5 171556538 171556550 EHF JASPAR yes 67765370
chr5 171556538 171556550 EHF JASPAR yes 70760427
chr5 171556538 171556551 ELF1 JASPAR yes 67765371
chr5 171556538 171556551 ELF1 JASPAR yes 70760428
chr5 171556538 171556552 SPI1 JASPAR yes 67765372
chr5 171556538 171556552 SPI1 JASPAR yes 70760429
chr5 171556539 171556546 SPI1 JASPAR yes 67765373
chr5 171556539 171556546 SPI1 JASPAR yes 70760430
chr5 171556539 171556547 EHF JASPAR yes 67765374
chr5 171556539 171556547 EHF JASPAR yes 70760431
chr5 171556543 171556564 ZNF263 JASPAR yes 67765375
chr5 171556543 171556564 ZNF263 JASPAR yes 70760432
chr5 171556548 171556554 ZNF354C JASPAR yes 67765376
chr5 171556548 171556554 ZNF354C JASPAR yes 70760433
chr5 171556548 171556563 SCRT1 JASPAR yes 67765377
chr5 171556548 171556563 SCRT1 JASPAR yes 70760434
chr5 171556579 171556583 YY1 TRANSFAC yes 67765378
chr5 171556579 171556583 YY1 TRANSFAC yes 70760435
chr5 171556580 171556600 PPARG JASPAR yes 67765379
chr5 171556580 171556600 PPARG JASPAR yes 70760436
chr5 171556587 171556608 ZNF263 JASPAR yes 67765380
chr5 171556587 171556608 ZNF263 JASPAR yes 70760437
chr5 171556593 171556613 RREB1 JASPAR yes 67765381
chr5 171556593 171556613 RREB1 JASPAR yes 70760438
chr5 171556596 171556608 ZBTB7C JASPAR yes 67765382
chr5 171556596 171556608 ZBTB7C JASPAR yes 70760439
chr5 171556599 171556611 ZBTB7C JASPAR yes 67765383
chr5 171556599 171556611 ZBTB7C JASPAR yes 70760440
chr5 171556608 171556611 MYB TRANSFAC yes 67765384
chr5 171556608 171556611 MYB TRANSFAC yes 70760441
chr5 171556645 171556664 RFX2 JASPAR yes 67765385
chr5 171556645 171556664 RFX2 JASPAR yes 70760442
chr5 171556652 171556660 FOXO3 JASPAR yes 67765386
chr5 171556652 171556660 FOXO3 JASPAR yes 70760443
chr5 171556662 171556680 RARA JASPAR yes 67765387
chr5 171556662 171556680 RARA JASPAR yes 70760444
chr5 171556709 171556726 BCL6B JASPAR yes 67765388
chr5 171556709 171556726 BCL6B JASPAR yes 70760445
chr5 171556714 171556735 IRF1 JASPAR yes 67765389
chr5 171556714 171556735 IRF1 JASPAR yes 70760446
chr5 171556718 171556732 SPI1 JASPAR yes 67765390
chr5 171556718 171556732 SPIC JASPAR yes 67765391
chr5 171556718 171556732 SPI1 JASPAR yes 70760447
chr5 171556718 171556732 SPIC JASPAR yes 70760448
chr5 171556719 171556732 ELF1 JASPAR yes 67765392
chr5 171556719 171556732 ELF1 JASPAR yes 70760449
chr5 171556722 171556729 SPIB JASPAR yes 67765393
chr5 171556722 171556729 SPIB JASPAR yes 70760450
chr5 171556740 171556757 BCL6B JASPAR yes 67765394
chr5 171556740 171556757 BCL6B JASPAR yes 70760451
chr5 171556741 171556744 MYB TRANSFAC yes 67765395
chr5 171556741 171556744 MYB TRANSFAC yes 70760452
chr5 171556744 171556755 STAT3 JASPAR yes 67765396
chr5 171556744 171556755 STAT3 JASPAR yes 70760453
chr5 171556749 171556764 FOXP1 JASPAR yes 67765397
chr5 171556749 171556764 FOXP1 JASPAR yes 70760454
chr5 171556752 171556763 FOXP2 JASPAR yes 67765398
chr5 171556752 171556763 FOXP2 JASPAR yes 70760455
chr5 171556779 171556786 NFATC2 JASPAR yes 67765399
chr5 171556779 171556786 NFATC2 JASPAR yes 70760456
chr5 171556780 171556801 IRF1 JASPAR yes 67765400
chr5 171556780 171556801 IRF1 JASPAR yes 70760457
chr5 171556784 171556799 STAT2 JASPAR yes 67765401
chr5 171556784 171556799 STAT2 JASPAR yes 70760458
chr5 171556785 171556797 IRF1 JASPAR yes 67765402
chr5 171556785 171556797 IRF1 JASPAR yes 70760459
chr5 171556796 171556811 RFX5 JASPAR yes 67765403
chr5 171556796 171556811 RFX5 JASPAR yes 70760460
chr5 171556799 171556810 NFE2L2 JASPAR yes 67765404
chr5 171556799 171556810 NFE2L2 JASPAR yes 70760461
chr5 171556800 171556816 SRF JASPAR yes 67765405
chr5 171556800 171556816 SRF JASPAR yes 70760462
chr5 171556812 171556821 NKX3-2 JASPAR yes 67765406
chr5 171556812 171556821 NKX3-2 JASPAR yes 70760463
SNP sites on vista50122[chr5:171556459-171556821]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 171556501 rs6893380 G T
MAFF
8698487
chr5 171556521 rs138210865 C T no 8698488
chr5 171556788 rs3756508 A C
IRF1 STAT2
8698489
chr5 171556804 rs115624401 C T
NFE2L2 RFX5 SRF
8698490
Genes possibly regulated by vista50122[chr5:171556459-171556821]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 171469077 171615390 - STK10 ENSG00000072786.8 171615390 0.85 1.0 5979 41431
chr5 171621176 171630456 + EFCAB9 ENSG00000214360.4 171621176 0.98 0.94 5980 35645
Expression level of Genes
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miRNAs possibly regulated by vista50122[chr5:171556459-171556821]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results