EnhancerDB
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  3. vista50123[chr5:171558365-171558643]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50123[chr5:171558365-171558643]
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Tissue distribution of vista50123
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Transcription factor that possibly regulate vista50123[chr5:171558365-171558643]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 171558367 171558385 ESR1 JASPAR yes 67765713
chr5 171558367 171558385 ESR1 JASPAR yes 70760464
chr5 171558410 171558414 NFE TRANSFAC yes 67765714
chr5 171558410 171558414 NFE TRANSFAC yes 70760465
chr5 171558415 171558427 HLF JASPAR yes 67765715
chr5 171558415 171558427 TEF JASPAR yes 67765716
chr5 171558415 171558427 HLF JASPAR yes 70760466
chr5 171558415 171558427 TEF JASPAR yes 70760467
chr5 171558416 171558426 CEBPB JASPAR yes 67765717
chr5 171558416 171558426 CEBPD JASPAR yes 67765718
chr5 171558416 171558426 CEBPE JASPAR yes 67765719
chr5 171558416 171558426 CEBPG JASPAR yes 67765720
chr5 171558416 171558426 CEBPB JASPAR yes 70760468
chr5 171558416 171558426 CEBPD JASPAR yes 70760469
chr5 171558416 171558426 CEBPE JASPAR yes 70760470
chr5 171558416 171558426 CEBPG JASPAR yes 70760471
chr5 171558450 171558461 EBF1 JASPAR yes 67765721
chr5 171558450 171558461 EBF1 JASPAR yes 70760472
chr5 171558450 171558464 NR2F1 JASPAR yes 67765722
chr5 171558450 171558464 NR2F1 JASPAR yes 70760473
chr5 171558455 171558468 NR2F1 JASPAR yes 67765723
chr5 171558455 171558468 NR2F1 JASPAR yes 70760474
chr5 171558458 171558475 RXRA JASPAR yes 67765724
chr5 171558458 171558475 RXRA JASPAR yes 70760475
chr5 171558459 171558463 ESR1 TRANSFAC yes 67765725
chr5 171558459 171558463 ESR1 TRANSFAC yes 70760476
chr5 171558499 171558510 FLI1 JASPAR yes 67765726
chr5 171558499 171558510 FLI1 JASPAR yes 70760477
chr5 171558500 171558511 ELF5 JASPAR yes 67765727
chr5 171558500 171558511 ELF5 JASPAR yes 70760478
chr5 171558500 171558513 ELF1 JASPAR yes 67765728
chr5 171558500 171558513 ELF1 JASPAR yes 70760479
chr5 171558500 171558514 SPI1 JASPAR yes 67765729
chr5 171558500 171558514 SPIC JASPAR yes 67765730
chr5 171558500 171558514 SPI1 JASPAR yes 70760480
chr5 171558500 171558514 SPIC JASPAR yes 70760481
chr5 171558503 171558510 SPIB JASPAR yes 67765731
chr5 171558503 171558510 SPIB JASPAR yes 70760482
chr5 171558540 171558554 SPI1 JASPAR yes 67765732
chr5 171558540 171558554 SPI1 JASPAR yes 70760483
chr5 171558547 171558562 FOXA1 JASPAR yes 67765733
chr5 171558547 171558562 FOXA1 JASPAR yes 70760484
chr5 171558548 171558560 FOXI1 JASPAR yes 67765734
chr5 171558548 171558560 FOXI1 JASPAR yes 70760485
chr5 171558548 171558562 POU4F1 JASPAR yes 67765735
chr5 171558548 171558562 POU4F1 JASPAR yes 70760486
chr5 171558548 171558563 FOXP1 JASPAR yes 67765736
chr5 171558548 171558563 HNF1A JASPAR yes 67765737
chr5 171558548 171558563 FOXP1 JASPAR yes 70760487
chr5 171558548 171558563 HNF1A JASPAR yes 70760488
chr5 171558549 171558561 FOXC2 JASPAR yes 67765738
chr5 171558549 171558561 FOXC2 JASPAR yes 70760489
chr5 171558549 171558563 ONECUT2 JASPAR yes 67765739
chr5 171558549 171558563 ONECUT3 JASPAR yes 67765740
chr5 171558549 171558563 ONECUT2 JASPAR yes 70760490
chr5 171558549 171558563 ONECUT3 JASPAR yes 70760491
chr5 171558550 171558561 FOXB1 JASPAR yes 67765741
chr5 171558550 171558561 FOXC1 JASPAR yes 67765742
chr5 171558550 171558561 PROP1 JASPAR yes 67765743
chr5 171558550 171558561 FOXB1 JASPAR yes 70760492
chr5 171558550 171558561 FOXC1 JASPAR yes 70760493
chr5 171558550 171558561 PROP1 JASPAR yes 70760494
chr5 171558551 171558555 YY1 TRANSFAC yes 67765744
chr5 171558551 171558555 YY1 TRANSFAC yes 70760495
chr5 171558551 171558566 FOXA1 JASPAR yes 67765745
chr5 171558551 171558566 FOXA1 JASPAR yes 70760496
chr5 171558552 171558564 FOXI1 JASPAR yes 67765746
chr5 171558552 171558564 FOXI1 JASPAR yes 70760497
chr5 171558552 171558567 FOXP1 JASPAR yes 67765747
chr5 171558552 171558567 FOXP1 JASPAR yes 70760498
chr5 171558553 171558565 FOXC2 JASPAR yes 67765748
chr5 171558553 171558565 FOXC2 JASPAR yes 70760499
chr5 171558553 171558567 ONECUT2 JASPAR yes 67765749
chr5 171558553 171558567 ONECUT3 JASPAR yes 67765750
chr5 171558553 171558567 ONECUT2 JASPAR yes 70760500
chr5 171558553 171558567 ONECUT3 JASPAR yes 70760501
chr5 171558554 171558565 FOXB1 JASPAR yes 67765751
chr5 171558554 171558565 FOXC1 JASPAR yes 67765752
chr5 171558554 171558565 FOXB1 JASPAR yes 70760502
chr5 171558554 171558565 FOXC1 JASPAR yes 70760503
chr5 171558555 171558559 YY1 TRANSFAC yes 67765753
chr5 171558555 171558559 YY1 TRANSFAC yes 70760504
chr5 171558559 171558563 YY1 TRANSFAC yes 67765754
chr5 171558559 171558563 YY1 TRANSFAC yes 70760505
chr5 171558575 171558586 STAT1 JASPAR yes 67765755
chr5 171558575 171558586 STAT3 JASPAR yes 67765756
chr5 171558575 171558586 STAT1 JASPAR yes 70760506
chr5 171558575 171558586 STAT3 JASPAR yes 70760507
chr5 171558580 171558585 ETS2 TRANSFAC yes 67765757
chr5 171558580 171558585 ETS2 TRANSFAC yes 70760508
chr5 171558588 171558602 NR2F1 JASPAR yes 67765758
chr5 171558588 171558602 NR2F1 JASPAR yes 70760509
chr5 171558627 171558642 STAT2 JASPAR yes 67765759
chr5 171558627 171558642 STAT2 JASPAR yes 70760510
chr5 171558628 171558642 SPI1 JASPAR yes 67765760
chr5 171558628 171558642 SPI1 JASPAR yes 70760511
chr5 171558631 171558646 MEF2A JASPAR yes 67765761
chr5 171558631 171558646 MEF2A JASPAR yes 70760512
chr5 171558632 171558647 MEF2C JASPAR yes 67765762
chr5 171558632 171558647 MEF2C JASPAR yes 70760513
chr5 171558643 171558648 GATA1 TRANSFAC yes 67765763
chr5 171558643 171558648 GATA1 TRANSFAC yes 70760514
SNP sites on vista50123[chr5:171558365-171558643]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 171558404 rs13435925 A G no 8698521
chr5 171558414 rs537303890 T G
NFE
8698522
chr5 171558415 rs556969957 C A
HLF TEF
8698523
chr5 171558469 rs12716277 C T
RXRA
8698524
chr5 171558612 rs115820344 G C no 8698525
Genes possibly regulated by vista50123[chr5:171558365-171558643]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 171469077 171615390 - STK10 ENSG00000072786.8 171615390 0.85 1.0 5979 43253
chr5 171621176 171630456 + EFCAB9 ENSG00000214360.4 171621176 0.98 0.94 5980 37467
Expression level of Genes
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miRNAs possibly regulated by vista50123[chr5:171558365-171558643]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results