EnhancerDB
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  3. vista50127[chr5:171581047-171581366]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50127[chr5:171581047-171581366]
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Tissue distribution of vista50127
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Transcription factor that possibly regulate vista50127[chr5:171581047-171581366]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 171581044 171581047 MYB TRANSFAC yes 67768753
chr5 171581044 171581047 MYB TRANSFAC yes 70760770
chr5 171581081 171581101 PPARG JASPAR yes 67768754
chr5 171581081 171581101 PPARG JASPAR yes 70760771
chr5 171581082 171581100 ESR1 JASPAR yes 67768755
chr5 171581082 171581100 ESR1 JASPAR yes 70760772
chr5 171581082 171581102 PPARG JASPAR yes 67768756
chr5 171581082 171581102 PPARG JASPAR yes 70760773
chr5 171581091 171581095 YY1 TRANSFAC yes 67768757
chr5 171581091 171581095 YY1 TRANSFAC yes 70760774
chr5 171581124 171581144 PPARG JASPAR yes 67768758
chr5 171581124 171581144 PPARG JASPAR yes 70760775
chr5 171581167 171581171 H1TF2 TRANSFAC yes 67768759
chr5 171581167 171581171 NFE TRANSFAC yes 67768760
chr5 171581167 171581171 SRF TRANSFAC yes 67768761
chr5 171581167 171581171 H1TF2 TRANSFAC yes 70760776
chr5 171581167 171581171 NFE TRANSFAC yes 70760777
chr5 171581167 171581171 SRF TRANSFAC yes 70760778
chr5 171581180 171581190 SREBF1 JASPAR yes 67768762
chr5 171581180 171581190 SREBF1 JASPAR yes 70760779
chr5 171581190 171581201 BATF JASPAR yes 67768763
chr5 171581190 171581201 BATF JASPAR yes 70760780
chr5 171581214 171581219 SP1 TRANSFAC yes 67768764
chr5 171581214 171581219 SP1 TRANSFAC yes 70760781
chr5 171581223 171581226 MYB TRANSFAC yes 67768765
chr5 171581223 171581226 MYB TRANSFAC yes 70760782
chr5 171581236 171581239 MYB TRANSFAC yes 67768766
chr5 171581236 171581239 MYB TRANSFAC yes 70760783
chr5 171581238 171581244 SOX10 JASPAR yes 67768767
chr5 171581238 171581244 SOX10 JASPAR yes 70760784
chr5 171581291 171581307 SOX8 JASPAR yes 67768768
chr5 171581291 171581307 SOX8 JASPAR yes 70760785
chr5 171581293 171581305 YY1 JASPAR yes 67768769
chr5 171581293 171581305 YY1 JASPAR yes 70760786
chr5 171581303 171581308 GATA2 JASPAR yes 67768770
chr5 171581303 171581308 GATA2 JASPAR yes 70760787
chr5 171581317 171581326 NFIX JASPAR yes 67768771
chr5 171581317 171581326 NFIX JASPAR yes 70760788
chr5 171581318 171581324 NFIC JASPAR yes 67768772
chr5 171581318 171581324 NFIC JASPAR yes 70760789
chr5 171581338 171581350 YY1 JASPAR yes 67768773
chr5 171581338 171581350 YY1 JASPAR yes 70760790
chr5 171581348 171581358 EN2 JASPAR yes 67768774
chr5 171581348 171581358 GBX1 JASPAR yes 67768775
chr5 171581348 171581358 GSX1 JASPAR yes 67768776
chr5 171581348 171581358 EN2 JASPAR yes 70760791
chr5 171581348 171581358 GBX1 JASPAR yes 70760792
chr5 171581348 171581358 GSX1 JASPAR yes 70760793
chr5 171581349 171581353 H1TF2 TRANSFAC yes 67768777
chr5 171581349 171581353 NFE TRANSFAC yes 67768778
chr5 171581349 171581353 SRF TRANSFAC yes 67768779
chr5 171581349 171581353 H1TF2 TRANSFAC yes 70760794
chr5 171581349 171581353 NFE TRANSFAC yes 70760795
chr5 171581349 171581353 SRF TRANSFAC yes 70760796
chr5 171581349 171581357 BSX JASPAR yes 67768780
chr5 171581349 171581357 DLX6 JASPAR yes 67768781
chr5 171581349 171581357 MSX1 JASPAR yes 67768782
chr5 171581349 171581357 MSX2 JASPAR yes 67768783
chr5 171581349 171581357 BSX JASPAR yes 70760797
chr5 171581349 171581357 DLX6 JASPAR yes 70760798
chr5 171581349 171581357 MSX1 JASPAR yes 70760799
chr5 171581349 171581357 MSX2 JASPAR yes 70760800
SNP sites on vista50127[chr5:171581047-171581366]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista50127[chr5:171581047-171581366]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 171469077 171615390 - STK10 ENSG00000072786.8 171615390 0.85 1.0 5979 65976
chr5 171621176 171630456 + EFCAB9 ENSG00000214360.4 171621176 0.98 0.94 5980 60190
Expression level of Genes
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miRNAs possibly regulated by vista50127[chr5:171581047-171581366]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results