EnhancerDB
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  3. vista50128[chr5:171600987-171601129]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50128[chr5:171600987-171601129]
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Tissue distribution of vista50128
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Transcription factor that possibly regulate vista50128[chr5:171600987-171601129]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 171600993 171600998 ETS2 TRANSFAC yes 67771435
chr5 171600993 171600998 ETS2 TRANSFAC yes 70760801
chr5 171601002 171601008 PEA3 TRANSFAC yes 67771436
chr5 171601002 171601008 PEA3 TRANSFAC yes 70760802
chr5 171601026 171601040 CREB3 JASPAR yes 67771437
chr5 171601026 171601040 CREB3L1 JASPAR yes 67771438
chr5 171601026 171601040 CREB3 JASPAR yes 70760803
chr5 171601026 171601040 CREB3L1 JASPAR yes 70760804
chr5 171601036 171601051 RUNX2 JASPAR yes 67771439
chr5 171601036 171601051 RUNX2 JASPAR yes 70760805
chr5 171601037 171601040 MYB TRANSFAC yes 67771440
chr5 171601037 171601040 MYB TRANSFAC yes 70760806
chr5 171601037 171601046 RUNX2 JASPAR yes 67771441
chr5 171601037 171601046 RUNX2 JASPAR yes 70760807
chr5 171601037 171601047 RUNX3 JASPAR yes 67771442
chr5 171601037 171601047 RUNX3 JASPAR yes 70760808
chr5 171601037 171601048 RUNX1 JASPAR yes 67771443
chr5 171601037 171601048 RUNX1 JASPAR yes 70760809
chr5 171601061 171601075 XBP1 JASPAR yes 67771444
chr5 171601061 171601075 XBP1 JASPAR yes 70760810
chr5 171601062 171601076 CREB3 JASPAR yes 67771445
chr5 171601062 171601076 CREB3L1 JASPAR yes 67771446
chr5 171601062 171601076 CREB3 JASPAR yes 70760811
chr5 171601062 171601076 CREB3L1 JASPAR yes 70760812
chr5 171601067 171601072 ATF1 TRANSFAC yes 67771447
chr5 171601067 171601072 ATF1 TRANSFAC yes 70760813
chr5 171601072 171601087 RUNX2 JASPAR yes 67771448
chr5 171601072 171601087 RUNX2 JASPAR yes 70760814
chr5 171601073 171601076 MYB TRANSFAC yes 67771449
chr5 171601073 171601076 MYB TRANSFAC yes 70760815
chr5 171601073 171601082 RUNX2 JASPAR yes 67771450
chr5 171601073 171601082 RUNX2 JASPAR yes 70760816
chr5 171601073 171601083 RUNX3 JASPAR yes 67771451
chr5 171601073 171601083 RUNX3 JASPAR yes 70760817
chr5 171601073 171601084 RUNX1 JASPAR yes 67771452
chr5 171601073 171601084 RUNX1 JASPAR yes 70760818
chr5 171601085 171601090 SP1 TRANSFAC yes 67771453
chr5 171601085 171601090 SP1 TRANSFAC yes 70760819
chr5 171601090 171601094 NFE TRANSFAC yes 67771454
chr5 171601090 171601094 NFE TRANSFAC yes 70760820
chr5 171601129 171601140 BATF JASPAR yes 67771455
chr5 171601129 171601140 BATF JASPAR yes 70760821
SNP sites on vista50128[chr5:171600987-171601129]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 171600995 rs144108191 G T
ETS2
8699125
chr5 171601057 rs9313580 C T no 8699126
chr5 171601097 rs144215339 A AGGGAGAGGCAAC no 8699127
chr5 171601097 rs570353598 A AGGGAGAGGCAAC no 8699128
Genes possibly regulated by vista50128[chr5:171600987-171601129]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 171469077 171615390 - STK10 ENSG00000072786.8 171615390 0.85 1.0 5979 85739
chr5 171621176 171630456 + EFCAB9 ENSG00000214360.4 171621176 0.98 0.94 5980 79953
Expression level of Genes
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miRNAs possibly regulated by vista50128[chr5:171600987-171601129]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results