EnhancerDB
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  3. vista50135[chr5:171668306-171668431]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50135[chr5:171668306-171668431]
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Tissue distribution of vista50135
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Transcription factor that possibly regulate vista50135[chr5:171668306-171668431]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 171668332 171668347 TFAP2C JASPAR yes 70761111
chr5 171668338 171668359 ZNF263 JASPAR yes 70761112
chr5 171668345 171668362 ESR1 JASPAR yes 70761113
chr5 171668354 171668364 SREBF1 JASPAR yes 70761114
chr5 171668364 171668374 SREBF2 JASPAR yes 70761115
chr5 171668393 171668411 IRF2 JASPAR yes 70761116
chr5 171668406 171668410 NFE TRANSFAC yes 70761117
chr5 171668410 171668420 ALX3 JASPAR yes 70761118
chr5 171668410 171668420 GSX2 JASPAR yes 70761119
chr5 171668410 171668420 MIXL1 JASPAR yes 70761120
chr5 171668411 171668419 ISX JASPAR yes 70761121
chr5 171668411 171668419 LHX9 JASPAR yes 70761122
chr5 171668411 171668419 LMX1B JASPAR yes 70761123
chr5 171668411 171668419 PRRX1 JASPAR yes 70761124
chr5 171668411 171668419 RAX2 JASPAR yes 70761125
chr5 171668411 171668419 SHOX JASPAR yes 70761126
chr5 171668411 171668419 UNCX JASPAR yes 70761127
chr5 171668412 171668427 FOXP1 JASPAR yes 70761128
chr5 171668414 171668429 FOXP1 JASPAR yes 70761129
chr5 171668415 171668430 FOXP1 JASPAR yes 70761130
chr5 171668416 171668422 TBP TRANSFAC yes 70761131
chr5 171668416 171668431 FOXP1 JASPAR yes 70761132
SNP sites on vista50135[chr5:171668306-171668431]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 171668327 rs12521828 C A,T no 8699562
chr5 171668377 rs147770901 C G no 8699563
Genes possibly regulated by vista50135[chr5:171668306-171668431]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 171469077 171615390 - STK10 ENSG00000072786.8 171615390 0.85 1.0 5979 47084
chr5 171621176 171630456 + EFCAB9 ENSG00000214360.4 171621176 0.98 0.94 5980 52870
chr5 171636644 171711075 - UBTD2 ENSG00000168246.5 171711075 0.73 0.99 5981 57356
Expression level of Genes
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miRNAs possibly regulated by vista50135[chr5:171668306-171668431]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results