EnhancerDB
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  3. vista50137[chr5:171702162-171702431]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50137[chr5:171702162-171702431]
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Tissue distribution of vista50137
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Transcription factor that possibly regulate vista50137[chr5:171702162-171702431]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 171702058 171702388 RUNX3 UCSC Txn Factor no Conserved 108537444
chr5 171702153 171702165 FOXI1 JASPAR yes 67777741
chr5 171702153 171702165 FOXI1 JASPAR yes 70761189
chr5 171702169 171702179 MAX JASPAR yes 67777742
chr5 171702169 171702179 MAX JASPAR yes 70761190
chr5 171702181 171702187 PEA3 TRANSFAC yes 67777743
chr5 171702181 171702187 PEA3 TRANSFAC yes 70761191
chr5 171702206 171702217 NFKB1 JASPAR yes 67777744
chr5 171702206 171702217 NFKB1 JASPAR yes 70761192
chr5 171702206 171702219 NFKB1 JASPAR yes 67777745
chr5 171702206 171702219 NFKB2 JASPAR yes 67777746
chr5 171702206 171702219 NFKB1 JASPAR yes 70761193
chr5 171702206 171702219 NFKB2 JASPAR yes 70761194
chr5 171702207 171702218 NFKB1 JASPAR yes 67777747
chr5 171702207 171702218 NFKB1 JASPAR yes 70761195
chr5 171702208 171702218 NFKB1 JASPAR yes 67777748
chr5 171702208 171702218 RELA JASPAR yes 67777749
chr5 171702208 171702218 REL JASPAR yes 67777750
chr5 171702208 171702218 NFKB1 JASPAR yes 70761196
chr5 171702208 171702218 RELA JASPAR yes 70761197
chr5 171702208 171702218 REL JASPAR yes 70761198
chr5 171702222 171702237 RUNX2 JASPAR yes 67777751
chr5 171702222 171702237 RUNX2 JASPAR yes 70761199
chr5 171702223 171702232 RUNX2 JASPAR yes 67777752
chr5 171702223 171702232 RUNX2 JASPAR yes 70761200
chr5 171702223 171702233 RUNX3 JASPAR yes 67777753
chr5 171702223 171702233 RUNX3 JASPAR yes 70761201
chr5 171702223 171702234 RUNX1 JASPAR yes 67777754
chr5 171702223 171702234 RUNX1 JASPAR yes 70761202
chr5 171702252 171702256 NFE TRANSFAC yes 67777755
chr5 171702252 171702256 NFE TRANSFAC yes 70761203
chr5 171702275 171702278 MYB TRANSFAC yes 67777756
chr5 171702275 171702278 MYB TRANSFAC yes 70761204
chr5 171702278 171702283 SP1 TRANSFAC yes 67777757
chr5 171702278 171702283 SP1 TRANSFAC yes 70761205
chr5 171702278 171702284 SP1 TRANSFAC yes 67777758
chr5 171702278 171702284 SP1 TRANSFAC yes 70761206
chr5 171702278 171702285 SP1 TRANSFAC yes 67777759
chr5 171702278 171702285 SP1 TRANSFAC yes 70761207
chr5 171702279 171702291 INSM1 JASPAR yes 67777760
chr5 171702279 171702291 INSM1 JASPAR yes 70761208
chr5 171702286 171702299 DUXA JASPAR yes 67777761
chr5 171702286 171702299 DUXA JASPAR yes 70761209
chr5 171702287 171702298 DUX4 JASPAR yes 67777762
chr5 171702287 171702298 PHOX2A JASPAR yes 67777763
chr5 171702287 171702298 PROP1 JASPAR yes 67777764
chr5 171702287 171702298 DUX4 JASPAR yes 70761210
chr5 171702287 171702298 PHOX2A JASPAR yes 70761211
chr5 171702287 171702298 PROP1 JASPAR yes 70761212
chr5 171702290 171702300 ALX3 JASPAR yes 67777765
chr5 171702290 171702300 ALX3 JASPAR yes 70761213
chr5 171702296 171702310 GLIS3 JASPAR yes 67777766
chr5 171702296 171702310 ZIC1 JASPAR yes 67777767
chr5 171702296 171702310 GLIS3 JASPAR yes 70761214
chr5 171702296 171702310 ZIC1 JASPAR yes 70761215
chr5 171702296 171702311 ZIC3 JASPAR yes 67777768
chr5 171702296 171702311 ZIC4 JASPAR yes 67777769
chr5 171702296 171702311 ZIC3 JASPAR yes 70761216
chr5 171702296 171702311 ZIC4 JASPAR yes 70761217
chr5 171702306 171702319 NFKB2 JASPAR yes 67777770
chr5 171702306 171702319 NFKB2 JASPAR yes 70761218
chr5 171702309 171702314 GATA1 TRANSFAC yes 67777771
chr5 171702309 171702314 GATA1 TRANSFAC yes 70761219
chr5 171702319 171702329 MAX JASPAR yes 67777772
chr5 171702319 171702329 MAX JASPAR yes 70761220
chr5 171702319 171702331 HES5 JASPAR yes 67777773
chr5 171702319 171702331 HES5 JASPAR yes 70761221
chr5 171702320 171702330 CLOCK JASPAR yes 67777774
chr5 171702320 171702330 HEY1 JASPAR yes 67777775
chr5 171702320 171702330 HEY2 JASPAR yes 67777776
chr5 171702320 171702330 MNT JASPAR yes 67777777
chr5 171702320 171702330 CLOCK JASPAR yes 70761222
chr5 171702320 171702330 HEY1 JASPAR yes 70761223
chr5 171702320 171702330 HEY2 JASPAR yes 70761224
chr5 171702320 171702330 MNT JASPAR yes 70761225
chr5 171702322 171702327 MYC TRANSFAC yes 67777778
chr5 171702322 171702327 USF1 TRANSFAC yes 67777779
chr5 171702322 171702327 USF2 TRANSFAC yes 67777780
chr5 171702322 171702327 MYC TRANSFAC yes 70761226
chr5 171702322 171702327 USF1 TRANSFAC yes 70761227
chr5 171702322 171702327 USF2 TRANSFAC yes 70761228
chr5 171702322 171702329 USF1 JASPAR yes 67777781
chr5 171702322 171702329 USF1 JASPAR yes 70761229
chr5 171702359 171702373 E2F7 JASPAR yes 67777782
chr5 171702359 171702373 E2F7 JASPAR yes 70761230
chr5 171702360 171702372 E2F8 JASPAR yes 67777783
chr5 171702360 171702372 E2F8 JASPAR yes 70761231
chr5 171702362 171702373 E2F6 JASPAR yes 67777784
chr5 171702362 171702373 E2F6 JASPAR yes 70761232
chr5 171702363 171702368 SP1 TRANSFAC yes 67777785
chr5 171702363 171702368 SP1 TRANSFAC yes 70761233
chr5 171702382 171702395 EOMES JASPAR yes 67777786
chr5 171702382 171702395 EOMES JASPAR yes 70761234
chr5 171702384 171702395 TBX20 JASPAR yes 67777787
chr5 171702384 171702395 TBX20 JASPAR yes 70761235
chr5 171702385 171702395 SREBF1 JASPAR yes 67777788
chr5 171702385 171702395 SREBF2 JASPAR yes 67777789
chr5 171702385 171702395 SREBF1 JASPAR yes 70761236
chr5 171702385 171702395 SREBF2 JASPAR yes 70761237
chr5 171702386 171702394 MGA JASPAR yes 67777790
chr5 171702386 171702394 MGA JASPAR yes 70761238
chr5 171702387 171702402 RUNX2 JASPAR yes 67777791
chr5 171702387 171702402 RUNX2 JASPAR yes 70761239
chr5 171702422 171702426 YY1 TRANSFAC yes 67777792
chr5 171702422 171702426 YY1 TRANSFAC yes 70761240
SNP sites on vista50137[chr5:171702162-171702431]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 171702169 rs28587090 T C
MAX RUNX3
8699758
chr5 171702312 rs139360781 A ATC
GATA1 NFKB2 RUNX3
8699759
chr5 171702374 rs192263175 C T
RUNX3
8699760
chr5 171702383 rs74764744 G A
EOMES RUNX3
8699761
Genes possibly regulated by vista50137[chr5:171702162-171702431]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 171469077 171615390 - STK10 ENSG00000072786.8 171615390 0.85 1.0 5979 13228
chr5 171621176 171630456 + EFCAB9 ENSG00000214360.4 171621176 0.98 0.94 5980 19014
chr5 171636644 171711075 - UBTD2 ENSG00000168246.5 171711075 0.73 0.99 5981 91356
Expression level of Genes
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miRNAs possibly regulated by vista50137[chr5:171702162-171702431]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results