EnhancerDB
  1. Home
  2. Enhancers
  3. vista50138[chr5:171709316-171709633]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50138[chr5:171709316-171709633]
Back to top
Tissue distribution of vista50138
Back to top
Transcription factor that possibly regulate vista50138[chr5:171709316-171709633]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 171709318 171709322 TEAD2 TRANSFAC yes 70761241
chr5 171709318 171709323 TBP TRANSFAC yes 70761242
chr5 171709326 171709339 POU2F2 JASPAR yes 70761243
chr5 171709328 171709332 YY1 TRANSFAC yes 70761244
chr5 171709370 171709385 FOXA1 JASPAR yes 70761245
chr5 171709372 171709386 FOXF2 JASPAR yes 70761246
chr5 171709373 171709384 FOXB1 JASPAR yes 70761247
chr5 171709373 171709384 FOXC1 JASPAR yes 70761248
chr5 171709374 171709378 YY1 TRANSFAC yes 70761249
chr5 171709374 171709385 FOXA1 JASPAR yes 70761250
chr5 171709388 171709399 BATF JASPAR yes 70761251
chr5 171709399 171709404 GATA2 JASPAR yes 70761252
chr5 171709432 171709435 MYB TRANSFAC yes 70761253
chr5 171709448 171709456 FEV JASPAR yes 70761254
chr5 171709452 171709462 PAX3 JASPAR yes 70761255
chr5 171709452 171709462 PAX7 JASPAR yes 70761256
chr5 171709454 171709463 VENTX JASPAR yes 70761257
chr5 171709457 171709461 YY1 TRANSFAC yes 70761258
chr5 171709504 171709512 MEIS3 JASPAR yes 70761259
chr5 171709504 171709515 NFE2L2 JASPAR yes 70761260
chr5 171709510 171709514 LFA1 TRANSFAC yes 70761261
chr5 171709549 171709560 HOXC12 JASPAR yes 70761262
chr5 171709576 171709591 HNF1A JASPAR yes 70761263
chr5 171709577 171709590 HNF1B JASPAR yes 70761264
chr5 171709582 171709602 TP53 JASPAR yes 70761265
chr5 171709599 171709603 YY1 TRANSFAC yes 70761266
chr5 171709613 171709616 MYB TRANSFAC yes 70761267
chr5 171709613 171709627 RORA JASPAR yes 70761268
chr5 171709616 171709620 YY1 TRANSFAC yes 70761269
chr5 171709621 171709625 ESR1 TRANSFAC yes 70761270
SNP sites on vista50138[chr5:171709316-171709633]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 171709322 rs6888888 A G
TBP TEAD2
8699811
chr5 171709444 rs79342544 G C no 8699812
chr5 171709465 rs10573508 CAAA C no 8699813
chr5 171709465 rs796515847 CAAA C no 8699814
chr5 171709497 rs72846911 G C no 8699815
chr5 171709539 rs61276432 T C no 8699816
chr5 171709570 rs200171404 CCAAA C no 8699817
chr5 171709570 rs370329583 CCAAA C no 8699818
Genes possibly regulated by vista50138[chr5:171709316-171709633]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 171469077 171615390 - STK10 ENSG00000072786.8 171615390 0.85 1.0 5979 6074
chr5 171621176 171630456 + EFCAB9 ENSG00000214360.4 171621176 0.98 0.94 5980 11860
chr5 171636644 171711075 - UBTD2 ENSG00000168246.5 171711075 0.73 0.99 5981 98558
Expression level of Genes
Back to top
miRNAs possibly regulated by vista50138[chr5:171709316-171709633]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results