EnhancerDB
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  3. vista50141[chr5:171788471-171789086]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50141[chr5:171788471-171789086]
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Tissue distribution of vista50141
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Transcription factor that possibly regulate vista50141[chr5:171788471-171789086]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 171788579 171788907 FOS UCSC Txn Factor no Conserved 108537445
chr5 171788602 171788882 JUND UCSC Txn Factor no Conserved 108537446
chr5 171788604 171788899 CEBPB UCSC Txn Factor no Conserved 108537447
chr5 171788637 171788839 BATF UCSC Txn Factor no Conserved 108537448
chr5 171788705 171788874 USF2 UCSC Txn Factor no Conserved 108537449
chr5 171788482 171788492 GABPA JASPAR yes 70761307
chr5 171788482 171788495 ELF1 JASPAR yes 70761308
chr5 171788525 171788536 ELK4 JASPAR yes 70761309
chr5 171788525 171788536 FLI1 JASPAR yes 70761310
chr5 171788525 171788538 ELF3 JASPAR yes 70761311
chr5 171788526 171788539 ELF1 JASPAR yes 70761312
chr5 171788527 171788534 SPI1 JASPAR yes 70761313
chr5 171788527 171788535 EHF JASPAR yes 70761314
chr5 171788527 171788535 FEV JASPAR yes 70761315
chr5 171788542 171788547 SP1 TRANSFAC yes 70761316
chr5 171788543 171788555 TFAP2A JASPAR yes 70761317
chr5 171788545 171788554 TFAP2A JASPAR yes 70761318
chr5 171788550 171788554 LFA1 TRANSFAC yes 70761319
chr5 171788565 171788569 NFE TRANSFAC yes 70761320
chr5 171788572 171788586 SPIC JASPAR yes 70761321
chr5 171788576 171788582 MZF1 JASPAR yes 70761322
chr5 171788588 171788603 RFX5 JASPAR yes 70761323
chr5 171788629 171788643 STAT1 JASPAR yes 70761324
chr5 171788629 171788644 STAT2 JASPAR yes 70761325
chr5 171788635 171788645 RELA JASPAR yes 70761326
chr5 171788639 171788649 MAX JASPAR yes 70761327
chr5 171788639 171788650 USF1 JASPAR yes 70761328
chr5 171788639 171788650 USF2 JASPAR yes 70761329
chr5 171788640 171788650 TFEB JASPAR yes 70761330
chr5 171788640 171788650 TFEC JASPAR yes 70761331
chr5 171788644 171788659 TFAP2A JASPAR yes 70761332
chr5 171788644 171788659 TFAP2C JASPAR yes 70761333
chr5 171788646 171788661 TFAP2A JASPAR yes 70761334
chr5 171788647 171788660 TFAP2A JASPAR yes 70761335
chr5 171788647 171788660 TFAP2B JASPAR yes 70761336
chr5 171788647 171788660 TFAP2C JASPAR yes 70761337
chr5 171788667 171788682 STAT2 JASPAR yes 70761338
chr5 171788668 171788682 STAT1 JASPAR yes 70761339
chr5 171788669 171788683 IRF8 JASPAR yes 70761340
chr5 171788681 171788700 REST JASPAR yes 70761341
chr5 171788705 171788715 SREBF1 JASPAR yes 70761342
chr5 171788705 171788715 SREBF2 JASPAR yes 70761343
chr5 171788724 171788728 YY1 TRANSFAC yes 70761344
chr5 171788729 171788737 UEF1 TRANSFAC yes 70761345
chr5 171788737 171788750 ATF4 JASPAR yes 70761346
chr5 171788742 171788754 NHLH1 JASPAR yes 70761347
chr5 171788743 171788753 NHLH1 JASPAR yes 70761348
chr5 171788743 171788753 TFAP4 JASPAR yes 70761349
chr5 171788760 171788766 YY1 JASPAR yes 70761350
chr5 171788777 171788783 JUN TRANSFAC yes 70761351
chr5 171788781 171788784 MYB TRANSFAC yes 70761352
chr5 171788786 171788791 ETS2 TRANSFAC yes 70761353
chr5 171788786 171788794 FEV JASPAR yes 70761354
chr5 171788787 171788794 SPI1 JASPAR yes 70761355
chr5 171788795 171788815 TP63 JASPAR yes 70761356
chr5 171788811 171788821 BHLHE41 JASPAR yes 70761357
chr5 171788811 171788821 SREBF2 JASPAR yes 70761358
chr5 171788811 171788821 TFE3 JASPAR yes 70761359
chr5 171788811 171788821 TFEB JASPAR yes 70761360
chr5 171788811 171788821 TFEC JASPAR yes 70761361
chr5 171788816 171788823 JUN TRANSFAC yes 70761362
chr5 171788825 171788837 ZBTB7C JASPAR yes 70761363
chr5 171788833 171788846 ZBTB18 JASPAR yes 70761364
chr5 171788852 171788873 ZNF263 JASPAR yes 70761365
chr5 171788883 171788894 YY2 JASPAR yes 70761366
chr5 171788895 171788903 MEIS2 JASPAR yes 70761367
chr5 171788895 171788903 MEIS3 JASPAR yes 70761368
chr5 171788896 171788900 NFE TRANSFAC yes 70761369
chr5 171788908 171788922 RORA JASPAR yes 70761370
chr5 171788914 171788922 HOXA5 JASPAR yes 70761371
chr5 171788923 171788933 GSC2 JASPAR yes 70761372
chr5 171788923 171788933 GSC JASPAR yes 70761373
chr5 171788924 171788932 OTX2 JASPAR yes 70761374
chr5 171788924 171788933 PITX3 JASPAR yes 70761375
chr5 171788928 171788942 MTF1 JASPAR yes 70761376
chr5 171788933 171788936 MYB TRANSFAC yes 70761377
chr5 171788935 171788940 ATF1 TRANSFAC yes 70761378
chr5 171788937 171788947 TFEB JASPAR yes 70761379
chr5 171788945 171788960 RUNX2 JASPAR yes 70761380
chr5 171788947 171788967 RREB1 JASPAR yes 70761381
chr5 171788976 171788980 YY1 TRANSFAC yes 70761382
chr5 171788998 171789009 FLI1 JASPAR yes 70761383
chr5 171788998 171789011 ELF3 JASPAR yes 70761384
chr5 171788999 171789003 YY1 TRANSFAC yes 70761385
chr5 171788999 171789010 ELF5 JASPAR yes 70761386
chr5 171788999 171789010 ETV2 JASPAR yes 70761387
chr5 171788999 171789011 EHF JASPAR yes 70761388
chr5 171788999 171789012 ELF1 JASPAR yes 70761389
chr5 171789000 171789008 FEV JASPAR yes 70761390
chr5 171789005 171789020 HNF4A JASPAR yes 70761391
chr5 171789038 171789044 LEF1 TRANSFAC yes 70761392
chr5 171789038 171789044 SOX10 JASPAR yes 70761393
chr5 171789047 171789068 ZNF263 JASPAR yes 70761394
chr5 171789048 171789053 ETS2 TRANSFAC yes 70761395
chr5 171789048 171789056 EHF JASPAR yes 70761396
chr5 171789055 171789069 SPIC JASPAR yes 70761397
chr5 171789061 171789066 ETS2 TRANSFAC yes 70761398
chr5 171789064 171789069 ETS2 TRANSFAC yes 70761399
chr5 171789066 171789076 RELA JASPAR yes 70761400
chr5 171789075 171789079 YY1 TRANSFAC yes 70761401
SNP sites on vista50141[chr5:171788471-171789086]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 171788496 rs550446886 C T no 8700245
chr5 171788508 rs114688771 C T no 8700246
chr5 171788536 rs2731708 C T
ELF1 ELF3 ELK4 FLI1
8700247
chr5 171788634 rs2731709 C T
CEBPB FOS JUND STAT1 STAT2
8700248
chr5 171788713 rs148508900 G A
BATF CEBPB FOS JUND SREBF1 SREBF2 USF2
8700249
chr5 171788725 rs2731710 T C
BATF CEBPB FOS JUND USF2 YY1
8700250
chr5 171788727 rs74464876 T C
BATF CEBPB FOS JUND USF2 YY1
8700251
chr5 171788803 rs530436697 C T
BATF CEBPB FOS JUND TP63 USF2
8700252
chr5 171788817 rs113786914 G A
BATF BHLHE41 CEBPB FOS JUN JUND SREBF2 TFE3 TFEB TFEC USF2
8700253
chr5 171788992 rs142856818 G A,T no 8700254
Genes possibly regulated by vista50141[chr5:171788471-171789086]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 171636644 171711075 - UBTD2 ENSG00000168246.5 171711075 0.73 0.99 5981 22604
chr5 171752185 171881527 - SH3PXD2B ENSG00000174705.7 171881527 0.73 1.0 5982 7559
Expression level of Genes
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miRNAs possibly regulated by vista50141[chr5:171788471-171789086]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results