EnhancerDB
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  3. vista50142[chr5:171834226-171834319]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50142[chr5:171834226-171834319]
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Tissue distribution of vista50142
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Transcription factor that possibly regulate vista50142[chr5:171834226-171834319]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 171834239 171834249 MAX JASPAR yes 67785833
chr5 171834239 171834249 MAX JASPAR yes 70761402
chr5 171834262 171834268 MZF1 JASPAR yes 67785834
chr5 171834262 171834268 MZF1 JASPAR yes 70761403
chr5 171834289 171834293 H1TF2 TRANSFAC yes 67785835
chr5 171834289 171834293 NFE TRANSFAC yes 67785836
chr5 171834289 171834293 SRF TRANSFAC yes 67785837
chr5 171834289 171834293 H1TF2 TRANSFAC yes 70761404
chr5 171834289 171834293 NFE TRANSFAC yes 70761405
chr5 171834289 171834293 SRF TRANSFAC yes 70761406
chr5 171834307 171834319 HES5 JASPAR yes 67785838
chr5 171834307 171834319 PKNOX1 JASPAR yes 67785839
chr5 171834307 171834319 PKNOX2 JASPAR yes 67785840
chr5 171834307 171834319 TGIF1 JASPAR yes 67785841
chr5 171834307 171834319 TGIF2 JASPAR yes 67785842
chr5 171834307 171834319 HES5 JASPAR yes 70761407
chr5 171834307 171834319 PKNOX1 JASPAR yes 70761408
chr5 171834307 171834319 PKNOX2 JASPAR yes 70761409
chr5 171834307 171834319 TGIF1 JASPAR yes 70761410
chr5 171834307 171834319 TGIF2 JASPAR yes 70761411
chr5 171834308 171834318 CLOCK JASPAR yes 67785843
chr5 171834308 171834318 NEUROG2 JASPAR yes 67785844
chr5 171834308 171834318 CLOCK JASPAR yes 70761412
chr5 171834308 171834318 NEUROG2 JASPAR yes 70761413
SNP sites on vista50142[chr5:171834226-171834319]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 171834285 rs187235063 T C no 8700642
Genes possibly regulated by vista50142[chr5:171834226-171834319]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 171752185 171881527 - SH3PXD2B ENSG00000174705.7 171881527 0.73 1.0 5982 52792
Expression level of Genes
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miRNAs possibly regulated by vista50142[chr5:171834226-171834319]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results