EnhancerDB
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  3. vista50154[chr5:172127867-172128162]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50154[chr5:172127867-172128162]
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Tissue distribution of vista50154
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Transcription factor that possibly regulate vista50154[chr5:172127867-172128162]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 172127859 172127873 POU4F1 JASPAR yes 67815547
chr5 172127859 172127873 POU4F1 JASPAR yes 70762070
chr5 172127859 172127875 POU4F2 JASPAR yes 67815548
chr5 172127859 172127875 POU4F3 JASPAR yes 67815549
chr5 172127859 172127875 POU4F2 JASPAR yes 70762071
chr5 172127859 172127875 POU4F3 JASPAR yes 70762072
chr5 172127864 172127867 MYB TRANSFAC yes 67815550
chr5 172127864 172127867 MYB TRANSFAC yes 70762073
chr5 172127885 172127904 RFX2 JASPAR yes 67815551
chr5 172127885 172127904 RFX2 JASPAR yes 70762074
chr5 172127928 172127938 MZF1 JASPAR yes 67815552
chr5 172127928 172127938 MZF1 JASPAR yes 70762075
chr5 172127929 172127935 MZF1 JASPAR yes 67815553
chr5 172127929 172127935 MZF1 JASPAR yes 70762076
chr5 172127941 172127951 NFIA JASPAR yes 67815554
chr5 172127941 172127951 NFIA JASPAR yes 70762077
chr5 172127942 172127951 NFIX JASPAR yes 67815555
chr5 172127942 172127951 NFIX JASPAR yes 70762078
chr5 172127943 172127949 NFIC JASPAR yes 67815556
chr5 172127943 172127949 NFIC JASPAR yes 70762079
chr5 172127958 172127972 TLX1 JASPAR yes 67815557
chr5 172127958 172127972 TLX1 JASPAR yes 70762080
chr5 172127969 172127980 ESRRA JASPAR yes 67815558
chr5 172127969 172127980 ESRRB JASPAR yes 67815559
chr5 172127969 172127980 ESRRA JASPAR yes 70762081
chr5 172127969 172127980 ESRRB JASPAR yes 70762082
chr5 172127971 172127981 RORA JASPAR yes 67815560
chr5 172127971 172127981 RORA JASPAR yes 70762083
chr5 172127986 172127991 ETS2 TRANSFAC yes 67815561
chr5 172127986 172127991 ETS2 TRANSFAC yes 70762084
chr5 172128009 172128024 MEF2C JASPAR yes 67815562
chr5 172128009 172128024 MEF2C JASPAR yes 70762085
chr5 172128010 172128025 MEF2A JASPAR yes 67815563
chr5 172128010 172128025 MEF2A JASPAR yes 70762086
chr5 172128011 172128023 MEF2A JASPAR yes 67815564
chr5 172128011 172128023 MEF2D JASPAR yes 67815565
chr5 172128011 172128023 MEF2A JASPAR yes 70762087
chr5 172128011 172128023 MEF2D JASPAR yes 70762088
chr5 172128020 172128026 HiNF-A TRANSFAC yes 67815566
chr5 172128020 172128026 HiNF-A TRANSFAC yes 70762089
chr5 172128035 172128040 ETS2 TRANSFAC yes 67815567
chr5 172128035 172128040 ETS2 TRANSFAC yes 70762090
chr5 172128044 172128054 POU6F2 JASPAR yes 67815568
chr5 172128044 172128054 POU6F2 JASPAR yes 70762091
chr5 172128045 172128055 GSX2 JASPAR yes 67815569
chr5 172128045 172128055 GSX2 JASPAR yes 70762092
chr5 172128045 172128056 HOXC11 JASPAR yes 67815570
chr5 172128045 172128056 HOXC13 JASPAR yes 67815571
chr5 172128045 172128056 HOXC11 JASPAR yes 70762093
chr5 172128045 172128056 HOXC13 JASPAR yes 70762094
chr5 172128046 172128054 NKX6-1 JASPAR yes 67815572
chr5 172128046 172128054 NKX6-2 JASPAR yes 67815573
chr5 172128046 172128054 NKX6-1 JASPAR yes 70762095
chr5 172128046 172128054 NKX6-2 JASPAR yes 70762096
chr5 172128046 172128056 HOXC10 JASPAR yes 67815574
chr5 172128046 172128056 HOXD13 JASPAR yes 67815575
chr5 172128046 172128056 HOXC10 JASPAR yes 70762097
chr5 172128046 172128056 HOXD13 JASPAR yes 70762098
chr5 172128048 172128052 YY1 TRANSFAC yes 67815576
chr5 172128048 172128052 YY1 TRANSFAC yes 70762099
chr5 172128064 172128078 RXRG JASPAR yes 67815577
chr5 172128064 172128078 RXRG JASPAR yes 70762100
chr5 172128065 172128075 HOXA13 JASPAR yes 67815578
chr5 172128065 172128075 HOXB13 JASPAR yes 67815579
chr5 172128065 172128075 HOXD13 JASPAR yes 67815580
chr5 172128065 172128075 HOXA13 JASPAR yes 70762101
chr5 172128065 172128075 HOXB13 JASPAR yes 70762102
chr5 172128065 172128075 HOXD13 JASPAR yes 70762103
chr5 172128066 172128077 CDX2 JASPAR yes 67815581
chr5 172128066 172128077 CDX2 JASPAR yes 70762104
chr5 172128077 172128090 SMAD2 JASPAR yes 67815582
chr5 172128077 172128090 SMAD2 JASPAR yes 70762105
chr5 172128080 172128090 TBR1 JASPAR yes 67815583
chr5 172128080 172128090 TBR1 JASPAR yes 70762106
chr5 172128080 172128091 TBX2 JASPAR yes 67815584
chr5 172128080 172128091 TBX2 JASPAR yes 70762107
chr5 172128081 172128091 TBX21 JASPAR yes 67815585
chr5 172128081 172128091 TBX21 JASPAR yes 70762108
chr5 172128082 172128090 MGA JASPAR yes 67815586
chr5 172128082 172128090 TBX15 JASPAR yes 67815587
chr5 172128082 172128090 TBX1 JASPAR yes 67815588
chr5 172128082 172128090 TBX4 JASPAR yes 67815589
chr5 172128082 172128090 TBX5 JASPAR yes 67815590
chr5 172128082 172128090 MGA JASPAR yes 70762109
chr5 172128082 172128090 TBX15 JASPAR yes 70762110
chr5 172128082 172128090 TBX1 JASPAR yes 70762111
chr5 172128082 172128090 TBX4 JASPAR yes 70762112
chr5 172128082 172128090 TBX5 JASPAR yes 70762113
chr5 172128082 172128091 ZEB1 JASPAR yes 67815591
chr5 172128082 172128091 ZEB1 JASPAR yes 70762114
chr5 172128082 172128097 SCRT1 JASPAR yes 67815592
chr5 172128082 172128097 SCRT1 JASPAR yes 70762115
chr5 172128083 172128093 FIGLA JASPAR yes 67815593
chr5 172128083 172128093 ID4 JASPAR yes 67815594
chr5 172128083 172128093 MSC JASPAR yes 67815595
chr5 172128083 172128093 MYF6 JASPAR yes 67815596
chr5 172128083 172128093 TCF3 JASPAR yes 67815597
chr5 172128083 172128093 TCF4 JASPAR yes 67815598
chr5 172128083 172128093 FIGLA JASPAR yes 70762116
chr5 172128083 172128093 ID4 JASPAR yes 70762117
chr5 172128083 172128093 MSC JASPAR yes 70762118
chr5 172128083 172128093 MYF6 JASPAR yes 70762119
chr5 172128083 172128093 TCF3 JASPAR yes 70762120
chr5 172128083 172128093 TCF4 JASPAR yes 70762121
chr5 172128084 172128093 SNAI2 JASPAR yes 67815599
chr5 172128084 172128093 SNAI2 JASPAR yes 70762122
chr5 172128084 172128097 SCRT2 JASPAR yes 67815600
chr5 172128084 172128097 SCRT2 JASPAR yes 70762123
chr5 172128085 172128090 USF2 TRANSFAC yes 67815601
chr5 172128085 172128090 USF2 TRANSFAC yes 70762124
chr5 172128085 172128099 PLAG1 JASPAR yes 67815602
chr5 172128085 172128099 PLAG1 JASPAR yes 70762125
chr5 172128086 172128092 PTF TRANSFAC yes 67815603
chr5 172128086 172128092 PTF TRANSFAC yes 70762126
chr5 172128091 172128107 T JASPAR yes 67815604
chr5 172128091 172128107 T JASPAR yes 70762127
chr5 172128095 172128107 PKNOX1 JASPAR yes 67815605
chr5 172128095 172128107 PKNOX2 JASPAR yes 67815606
chr5 172128095 172128107 PKNOX1 JASPAR yes 70762128
chr5 172128095 172128107 PKNOX2 JASPAR yes 70762129
chr5 172128096 172128105 SNAI2 JASPAR yes 67815607
chr5 172128096 172128105 SNAI2 JASPAR yes 70762130
chr5 172128096 172128106 ID4 JASPAR yes 67815608
chr5 172128096 172128106 MSC JASPAR yes 67815609
chr5 172128096 172128106 TCF3 JASPAR yes 67815610
chr5 172128096 172128106 ID4 JASPAR yes 70762131
chr5 172128096 172128106 MSC JASPAR yes 70762132
chr5 172128096 172128106 TCF3 JASPAR yes 70762133
chr5 172128112 172128127 HSF1 JASPAR yes 67815611
chr5 172128112 172128127 HSF1 JASPAR yes 70762134
chr5 172128113 172128126 HSF1 JASPAR yes 67815612
chr5 172128113 172128126 HSF2 JASPAR yes 67815613
chr5 172128113 172128126 HSF4 JASPAR yes 67815614
chr5 172128113 172128126 HSF1 JASPAR yes 70762135
chr5 172128113 172128126 HSF2 JASPAR yes 70762136
chr5 172128113 172128126 HSF4 JASPAR yes 70762137
chr5 172128121 172128132 E2F6 JASPAR yes 67815615
chr5 172128121 172128132 E2F6 JASPAR yes 70762138
chr5 172128123 172128143 RREB1 JASPAR yes 67815616
chr5 172128123 172128143 RREB1 JASPAR yes 70762139
chr5 172128125 172128145 RREB1 JASPAR yes 67815617
chr5 172128125 172128145 RREB1 JASPAR yes 70762140
chr5 172128126 172128141 RUNX2 JASPAR yes 67815618
chr5 172128126 172128141 RUNX2 JASPAR yes 70762141
chr5 172128128 172128148 RREB1 JASPAR yes 67815619
chr5 172128128 172128148 RREB1 JASPAR yes 70762142
chr5 172128130 172128150 RREB1 JASPAR yes 67815620
chr5 172128130 172128150 RREB1 JASPAR yes 70762143
chr5 172128133 172128153 RREB1 JASPAR yes 67815621
chr5 172128133 172128153 RREB1 JASPAR yes 70762144
chr5 172128134 172128154 RREB1 JASPAR yes 67815622
chr5 172128134 172128154 RREB1 JASPAR yes 70762145
chr5 172128136 172128156 RREB1 JASPAR yes 67815623
chr5 172128136 172128156 RREB1 JASPAR yes 70762146
chr5 172128138 172128158 RREB1 JASPAR yes 67815624
chr5 172128138 172128158 RREB1 JASPAR yes 70762147
chr5 172128142 172128162 RREB1 JASPAR yes 67815625
chr5 172128142 172128162 RREB1 JASPAR yes 70762148
chr5 172128144 172128164 RREB1 JASPAR yes 67815626
chr5 172128144 172128164 RREB1 JASPAR yes 70762149
chr5 172128146 172128166 RREB1 JASPAR yes 67815627
chr5 172128146 172128166 RREB1 JASPAR yes 70762150
chr5 172128148 172128168 RREB1 JASPAR yes 67815628
chr5 172128148 172128168 RREB1 JASPAR yes 70762151
chr5 172128150 172128170 RREB1 JASPAR yes 67815629
chr5 172128150 172128170 RREB1 JASPAR yes 70762152
SNP sites on vista50154[chr5:172127867-172128162]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 172127914 rs559592454 A G no 8703686
chr5 172127982 rs62386693 T G no 8703687
chr5 172128015 rs138828595 C T
MEF2A MEF2C MEF2D
8703688
chr5 172128143 rs3059182 A AAC,AACACACAC
RREB1
8703689
Genes possibly regulated by vista50154[chr5:172127867-172128162]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 172036245 172036436 - AC027309.1 ENSG00000268553.1 172036436 0.0 0.0 5983 8569
chr5 172068269 172118543 + NEURL1B ENSG00000214357.4 172068269 0.78 1.0 5984 40402
chr5 172195093 172198198 - DUSP1 ENSG00000120129.5 172198198 0.79 1.0 5985 29964
Expression level of Genes
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miRNAs possibly regulated by vista50154[chr5:172127867-172128162]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results