EnhancerDB
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  3. vista50157[chr5:172160417-172160946]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50157[chr5:172160417-172160946]
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Tissue distribution of vista50157
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Transcription factor that possibly regulate vista50157[chr5:172160417-172160946]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 172160619 172160906 STAT3 UCSC Txn Factor no Conserved 108537468
chr5 172160415 172160423 SP1 TRANSFAC yes 67819381
chr5 172160415 172160423 SP1 TRANSFAC yes 70762226
chr5 172160441 172160456 SOX21 JASPAR yes 67819382
chr5 172160441 172160456 SOX21 JASPAR yes 70762227
chr5 172160462 172160472 CLOCK JASPAR yes 67819383
chr5 172160462 172160472 MAX JASPAR yes 67819384
chr5 172160462 172160472 MNT JASPAR yes 67819385
chr5 172160462 172160472 CLOCK JASPAR yes 70762228
chr5 172160462 172160472 MAX JASPAR yes 70762229
chr5 172160462 172160472 MNT JASPAR yes 70762230
chr5 172160463 172160470 USF1 JASPAR yes 67819386
chr5 172160463 172160470 USF1 JASPAR yes 70762231
chr5 172160463 172160473 MAX JASPAR yes 67819387
chr5 172160463 172160473 MAX JASPAR yes 70762232
chr5 172160464 172160469 MYC TRANSFAC yes 67819388
chr5 172160464 172160469 USF1 TRANSFAC yes 67819389
chr5 172160464 172160469 USF2 TRANSFAC yes 67819390
chr5 172160464 172160469 MYC TRANSFAC yes 70762233
chr5 172160464 172160469 USF1 TRANSFAC yes 70762234
chr5 172160464 172160469 USF2 TRANSFAC yes 70762235
chr5 172160464 172160471 USF1 JASPAR yes 67819391
chr5 172160464 172160471 USF1 JASPAR yes 70762236
chr5 172160472 172160486 SPI1 JASPAR yes 67819392
chr5 172160472 172160486 SPIC JASPAR yes 67819393
chr5 172160472 172160486 SPI1 JASPAR yes 70762237
chr5 172160472 172160486 SPIC JASPAR yes 70762238
chr5 172160473 172160483 MZF1 JASPAR yes 67819394
chr5 172160473 172160483 MZF1 JASPAR yes 70762239
chr5 172160476 172160481 TFAP2A TRANSFAC yes 67819395
chr5 172160476 172160481 TFAP2A TRANSFAC yes 70762240
chr5 172160476 172160482 MZF1 JASPAR yes 67819396
chr5 172160476 172160482 MZF1 JASPAR yes 70762241
chr5 172160478 172160483 ETS2 TRANSFAC yes 67819397
chr5 172160478 172160483 ETS2 TRANSFAC yes 70762242
chr5 172160478 172160492 STAT1 JASPAR yes 67819398
chr5 172160478 172160492 STAT1 JASPAR yes 70762243
chr5 172160478 172160496 IRF2 JASPAR yes 67819399
chr5 172160478 172160496 IRF2 JASPAR yes 70762244
chr5 172160492 172160508 ZNF143 JASPAR yes 67819400
chr5 172160492 172160508 ZNF143 JASPAR yes 70762245
chr5 172160493 172160504 EBF1 JASPAR yes 67819401
chr5 172160493 172160504 EBF1 JASPAR yes 70762246
chr5 172160554 172160564 FIGLA JASPAR yes 67819402
chr5 172160554 172160564 FIGLA JASPAR yes 70762247
chr5 172160580 172160585 SP1 TRANSFAC yes 67819403
chr5 172160580 172160585 SP1 TRANSFAC yes 70762248
chr5 172160583 172160598 TFAP2A JASPAR yes 67819404
chr5 172160583 172160598 TFAP2C JASPAR yes 67819405
chr5 172160583 172160598 TFAP2A JASPAR yes 70762249
chr5 172160583 172160598 TFAP2C JASPAR yes 70762250
chr5 172160584 172160595 TFAP2A JASPAR yes 67819406
chr5 172160584 172160595 TFAP2B JASPAR yes 67819407
chr5 172160584 172160595 TFAP2C JASPAR yes 67819408
chr5 172160584 172160595 TFAP2A JASPAR yes 70762251
chr5 172160584 172160595 TFAP2B JASPAR yes 70762252
chr5 172160584 172160595 TFAP2C JASPAR yes 70762253
chr5 172160585 172160594 TFAP2A JASPAR yes 67819409
chr5 172160585 172160594 TFAP2A JASPAR yes 70762254
chr5 172160635 172160638 MYB TRANSFAC yes 67819410
chr5 172160635 172160638 MYB TRANSFAC yes 70762255
chr5 172160635 172160649 NR2F1 JASPAR yes 67819411
chr5 172160635 172160649 NR2F1 JASPAR yes 70762256
chr5 172160648 172160658 ELK1 JASPAR yes 67819412
chr5 172160648 172160658 ELK1 JASPAR yes 70762257
chr5 172160652 172160658 ETS1 JASPAR yes 67819413
chr5 172160652 172160658 ETS1 JASPAR yes 70762258
chr5 172160653 172160663 REL JASPAR yes 67819414
chr5 172160653 172160663 REL JASPAR yes 70762259
chr5 172160662 172160677 TFAP2C JASPAR yes 67819415
chr5 172160662 172160677 TFAP2C JASPAR yes 70762260
chr5 172160662 172160683 REST JASPAR yes 67819416
chr5 172160662 172160683 REST JASPAR yes 70762261
chr5 172160663 172160682 REST JASPAR yes 67819417
chr5 172160663 172160682 REST JASPAR yes 70762262
chr5 172160665 172160676 EBF1 JASPAR yes 67819418
chr5 172160665 172160676 EBF1 JASPAR yes 70762263
chr5 172160678 172160682 ESR1 TRANSFAC yes 67819419
chr5 172160678 172160682 ESR1 TRANSFAC yes 70762264
chr5 172160695 172160705 RUNX3 JASPAR yes 67819420
chr5 172160695 172160705 RUNX3 JASPAR yes 70762265
chr5 172160750 172160765 STAT2 JASPAR yes 67819421
chr5 172160750 172160765 STAT2 JASPAR yes 70762266
chr5 172160751 172160765 STAT1 JASPAR yes 67819422
chr5 172160751 172160765 STAT1 JASPAR yes 70762267
chr5 172160761 172160775 E2F7 JASPAR yes 67819423
chr5 172160761 172160775 E2F7 JASPAR yes 70762268
chr5 172160770 172160781 BATF JASPAR yes 67819424
chr5 172160770 172160781 BATF JASPAR yes 70762269
chr5 172160792 172160802 MNX1 JASPAR yes 67819425
chr5 172160792 172160802 MNX1 JASPAR yes 70762270
chr5 172160793 172160801 BARX1 JASPAR yes 67819426
chr5 172160793 172160801 BSX JASPAR yes 67819427
chr5 172160793 172160801 ISL2 JASPAR yes 67819428
chr5 172160793 172160801 LMX1B JASPAR yes 67819429
chr5 172160793 172160801 MSX1 JASPAR yes 67819430
chr5 172160793 172160801 MSX2 JASPAR yes 67819431
chr5 172160793 172160801 BARX1 JASPAR yes 70762271
chr5 172160793 172160801 BSX JASPAR yes 70762272
chr5 172160793 172160801 ISL2 JASPAR yes 70762273
chr5 172160793 172160801 LMX1B JASPAR yes 70762274
chr5 172160793 172160801 MSX1 JASPAR yes 70762275
chr5 172160793 172160801 MSX2 JASPAR yes 70762276
chr5 172160794 172160815 MAFG JASPAR yes 67819432
chr5 172160794 172160815 MAFG JASPAR yes 70762277
chr5 172160807 172160817 TEAD4 JASPAR yes 67819433
chr5 172160807 172160817 TEAD4 JASPAR yes 70762278
chr5 172160807 172160819 TEAD1 JASPAR yes 67819434
chr5 172160807 172160819 TEAD1 JASPAR yes 70762279
chr5 172160808 172160816 TEAD3 JASPAR yes 67819435
chr5 172160808 172160816 TEAD3 JASPAR yes 70762280
chr5 172160838 172160853 RFX5 JASPAR yes 67819436
chr5 172160838 172160853 RFX5 JASPAR yes 70762281
chr5 172160856 172160867 FOXH1 JASPAR yes 67819437
chr5 172160856 172160867 FOXH1 JASPAR yes 70762282
chr5 172160938 172160955 BCL6B JASPAR yes 67819438
chr5 172160938 172160955 BCL6B JASPAR yes 70762283
chr5 172160941 172160951 SMAD3 JASPAR yes 67819439
chr5 172160941 172160951 SMAD3 JASPAR yes 70762284
SNP sites on vista50157[chr5:172160417-172160946]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 172160464 rs188450161 C T
CLOCK MAX MNT MYC USF1 USF2
8704047
chr5 172160470 rs79487392 G T
CLOCK MAX MNT USF1
8704048
chr5 172160498 rs324340 A G
EBF1 ZNF143
8704049
chr5 172160736 rs322396 A G
STAT3
8704050
chr5 172160769 rs140802519 G A
E2F7 STAT3
8704051
Genes possibly regulated by vista50157[chr5:172160417-172160946]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 172068269 172118543 + NEURL1B ENSG00000214357.4 172068269 0.78 1.0 5984 7852
chr5 172195093 172198198 - DUSP1 ENSG00000120129.5 172198198 0.79 1.0 5985 62748
Expression level of Genes
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miRNAs possibly regulated by vista50157[chr5:172160417-172160946]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results