EnhancerDB
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  3. vista5017[chr1:212808477-212808830]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5017[chr1:212808477-212808830]
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Tissue distribution of vista5017
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Transcription factor that possibly regulate vista5017[chr1:212808477-212808830]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 212808468 212808481 ZBTB18 JASPAR yes 35142495
chr1 212808468 212808481 ZBTB18 JASPAR yes 118454542
chr1 212808475 212808490 HNF1A JASPAR yes 35142496
chr1 212808475 212808490 HNF1A JASPAR yes 118454543
chr1 212808476 212808489 HNF1B JASPAR yes 35142497
chr1 212808476 212808489 HNF1B JASPAR yes 118454544
chr1 212808478 212808493 LEF1 JASPAR yes 35142498
chr1 212808478 212808493 LEF1 JASPAR yes 118454545
chr1 212808479 212808493 TCF7L2 JASPAR yes 35142499
chr1 212808479 212808493 TCF7L2 JASPAR yes 118454546
chr1 212808482 212808488 LEF1 TRANSFAC yes 35142500
chr1 212808482 212808488 TCF4 TRANSFAC yes 35142501
chr1 212808482 212808488 LEF1 TRANSFAC yes 118454547
chr1 212808482 212808488 TCF4 TRANSFAC yes 118454548
chr1 212808484 212808492 RHOXF1 JASPAR yes 35142502
chr1 212808484 212808492 RHOXF1 JASPAR yes 118454549
chr1 212808493 212808506 SMAD2 JASPAR yes 35142503
chr1 212808493 212808506 SMAD2 JASPAR yes 118454550
chr1 212808554 212808563 PITX3 JASPAR yes 35142504
chr1 212808554 212808563 PITX3 JASPAR yes 118454551
chr1 212808554 212808564 GSC2 JASPAR yes 35142505
chr1 212808554 212808564 GSC JASPAR yes 35142506
chr1 212808554 212808564 GSC2 JASPAR yes 118454552
chr1 212808554 212808564 GSC JASPAR yes 118454553
chr1 212808555 212808563 OTX1 JASPAR yes 35142507
chr1 212808555 212808563 OTX1 JASPAR yes 118454554
chr1 212808568 212808581 POU2F2 JASPAR yes 35142508
chr1 212808568 212808581 POU2F2 JASPAR yes 118454555
chr1 212808569 212808581 POU3F1 JASPAR yes 35142509
chr1 212808569 212808581 POU3F2 JASPAR yes 35142510
chr1 212808569 212808581 POU3F1 JASPAR yes 118454556
chr1 212808569 212808581 POU3F2 JASPAR yes 118454557
chr1 212808570 212808582 POU2F1 JASPAR yes 35142511
chr1 212808570 212808582 POU2F1 JASPAR yes 118454558
chr1 212808570 212808588 SRF JASPAR yes 35142512
chr1 212808570 212808588 SRF JASPAR yes 118454559
chr1 212808571 212808580 POU5F1B JASPAR yes 35142513
chr1 212808571 212808580 POU5F1B JASPAR yes 118454560
chr1 212808572 212808580 FOXL1 JASPAR yes 35142514
chr1 212808572 212808580 FOXL1 JASPAR yes 118454561
chr1 212808576 212808589 JUN JASPAR yes 35142515
chr1 212808576 212808589 JUN JASPAR yes 118454562
chr1 212808579 212808599 PPARG JASPAR yes 35142516
chr1 212808579 212808599 PPARG JASPAR yes 118454563
chr1 212808581 212808589 FEV JASPAR yes 35142517
chr1 212808581 212808589 FEV JASPAR yes 118454564
chr1 212808583 212808597 STAT1 JASPAR yes 35142518
chr1 212808583 212808597 STAT1 JASPAR yes 118454565
chr1 212808583 212808598 STAT2 JASPAR yes 35142519
chr1 212808583 212808598 STAT2 JASPAR yes 118454566
chr1 212808598 212808616 NR3C1 JASPAR yes 35142520
chr1 212808598 212808616 NR3C1 JASPAR yes 118454567
chr1 212808602 212808615 NFKB2 JASPAR yes 35142521
chr1 212808602 212808615 NFKB2 JASPAR yes 118454568
chr1 212808603 212808612 NF-kappaB TRANSFAC yes 35142522
chr1 212808603 212808612 NF-kappaB TRANSFAC yes 118454569
chr1 212808603 212808613 NFKB1 JASPAR yes 35142523
chr1 212808603 212808613 RELA JASPAR yes 35142524
chr1 212808603 212808613 REL JASPAR yes 35142525
chr1 212808603 212808613 NFKB1 JASPAR yes 118454570
chr1 212808603 212808613 RELA JASPAR yes 118454571
chr1 212808603 212808613 REL JASPAR yes 118454572
chr1 212808603 212808614 NFKB1 JASPAR yes 35142526
chr1 212808603 212808614 NFKB1 JASPAR yes 118454573
chr1 212808604 212808614 NFKB1 JASPAR yes 35142527
chr1 212808604 212808614 NFKB1 JASPAR yes 118454574
chr1 212808616 212808620 H4TF2 TRANSFAC yes 35142528
chr1 212808616 212808620 H4TF2 TRANSFAC yes 118454575
chr1 212808647 212808665 MAFF JASPAR yes 35142529
chr1 212808647 212808665 MAFF JASPAR yes 118454576
chr1 212808687 212808698 FOXA1 JASPAR yes 35142530
chr1 212808687 212808698 FOXA1 JASPAR yes 118454577
chr1 212808687 212808702 FOXA1 JASPAR yes 35142531
chr1 212808687 212808702 FOXA1 JASPAR yes 118454578
chr1 212808688 212808699 FOXB1 JASPAR yes 35142532
chr1 212808688 212808699 FOXC1 JASPAR yes 35142533
chr1 212808688 212808699 FOXB1 JASPAR yes 118454579
chr1 212808688 212808699 FOXC1 JASPAR yes 118454580
chr1 212808697 212808715 IRF2 JASPAR yes 35142534
chr1 212808697 212808715 IRF2 JASPAR yes 118454581
chr1 212808698 212808719 IRF1 JASPAR yes 35142535
chr1 212808698 212808719 IRF1 JASPAR yes 118454582
chr1 212808700 212808705 ETS2 TRANSFAC yes 35142536
chr1 212808700 212808705 ETS2 TRANSFAC yes 118454583
chr1 212808700 212808715 STAT2 JASPAR yes 35142537
chr1 212808700 212808715 STAT2 JASPAR yes 118454584
chr1 212808702 212808714 IRF1 JASPAR yes 35142538
chr1 212808702 212808714 IRF1 JASPAR yes 118454585
chr1 212808702 212808716 IRF7 JASPAR yes 35142539
chr1 212808702 212808716 IRF8 JASPAR yes 35142540
chr1 212808702 212808716 IRF7 JASPAR yes 118454586
chr1 212808702 212808716 IRF8 JASPAR yes 118454587
chr1 212808702 212808717 IRF9 JASPAR yes 35142541
chr1 212808702 212808717 IRF9 JASPAR yes 118454588
chr1 212808730 212808745 SCRT1 JASPAR yes 35142542
chr1 212808730 212808745 SCRT1 JASPAR yes 118454589
chr1 212808733 212808754 IRF1 JASPAR yes 35142543
chr1 212808733 212808754 IRF1 JASPAR yes 118454590
chr1 212808735 212808750 STAT2 JASPAR yes 35142544
chr1 212808735 212808750 STAT2 JASPAR yes 118454591
chr1 212808737 212808751 IRF8 JASPAR yes 35142545
chr1 212808737 212808751 IRF8 JASPAR yes 118454592
chr1 212808737 212808752 IRF9 JASPAR yes 35142546
chr1 212808737 212808752 IRF9 JASPAR yes 118454593
chr1 212808739 212808760 IRF1 JASPAR yes 35142547
chr1 212808739 212808760 IRF1 JASPAR yes 118454594
chr1 212808750 212808754 YY1 TRANSFAC yes 35142548
chr1 212808750 212808754 YY1 TRANSFAC yes 118454595
chr1 212808751 212808761 GBX2 JASPAR yes 35142549
chr1 212808751 212808761 MNX1 JASPAR yes 35142550
chr1 212808751 212808761 RAX JASPAR yes 35142551
chr1 212808751 212808761 GBX2 JASPAR yes 118454596
chr1 212808751 212808761 MNX1 JASPAR yes 118454597
chr1 212808751 212808761 RAX JASPAR yes 118454598
chr1 212808752 212808760 BARX1 JASPAR yes 35142552
chr1 212808752 212808760 BSX JASPAR yes 35142553
chr1 212808752 212808760 ISL2 JASPAR yes 35142554
chr1 212808752 212808760 LMX1B JASPAR yes 35142555
chr1 212808752 212808760 MSX1 JASPAR yes 35142556
chr1 212808752 212808760 MSX2 JASPAR yes 35142557
chr1 212808752 212808760 BARX1 JASPAR yes 118454599
chr1 212808752 212808760 BSX JASPAR yes 118454600
chr1 212808752 212808760 ISL2 JASPAR yes 118454601
chr1 212808752 212808760 LMX1B JASPAR yes 118454602
chr1 212808752 212808760 MSX1 JASPAR yes 118454603
chr1 212808752 212808760 MSX2 JASPAR yes 118454604
chr1 212808754 212808765 CEBPB JASPAR yes 35142558
chr1 212808754 212808765 CEBPB JASPAR yes 118454605
chr1 212808754 212808767 ATF4 JASPAR yes 35142559
chr1 212808754 212808767 ATF4 JASPAR yes 118454606
chr1 212808754 212808769 JUND JASPAR yes 35142560
chr1 212808754 212808769 JUND JASPAR yes 118454607
chr1 212808755 212808766 CEBPA JASPAR yes 35142561
chr1 212808755 212808766 CEBPA JASPAR yes 118454608
chr1 212808755 212808768 JUN JASPAR yes 35142562
chr1 212808755 212808768 JUN JASPAR yes 118454609
chr1 212808761 212808773 PBX1 JASPAR yes 35142563
chr1 212808761 212808773 PBX1 JASPAR yes 118454610
chr1 212808769 212808773 H1TF2 TRANSFAC yes 35142564
chr1 212808769 212808773 NFE TRANSFAC yes 35142565
chr1 212808769 212808773 SRF TRANSFAC yes 35142566
chr1 212808769 212808773 H1TF2 TRANSFAC yes 118454611
chr1 212808769 212808773 NFE TRANSFAC yes 118454612
chr1 212808769 212808773 SRF TRANSFAC yes 118454613
chr1 212808793 212808798 ETS2 TRANSFAC yes 35142567
chr1 212808793 212808798 ETS2 TRANSFAC yes 118454614
chr1 212808804 212808808 H1TF2 TRANSFAC yes 35142568
chr1 212808804 212808808 NFE TRANSFAC yes 35142569
chr1 212808804 212808808 SRF TRANSFAC yes 35142570
chr1 212808804 212808808 H1TF2 TRANSFAC yes 118454615
chr1 212808804 212808808 NFE TRANSFAC yes 118454616
chr1 212808804 212808808 SRF TRANSFAC yes 118454617
chr1 212808811 212808814 MYB TRANSFAC yes 35142571
chr1 212808811 212808814 MYB TRANSFAC yes 118454618
SNP sites on vista5017[chr1:212808477-212808830]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 212808739 rs189033846 G C
IRF1 IRF8 IRF9 SCRT1 STAT2
924646
Genes possibly regulated by vista5017[chr1:212808477-212808830]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 212738676 212794119 + ATF3 ENSG00000162772.12 212738676 0.8 1.0 1828 30199
chr1 212797789 212800120 + FAM71A ENSG00000162771.6 212797789 0.96 1.0 1829 89312
chr1 212859760 212873327 - BATF3 ENSG00000123685.4 212873327 0.87 1.0 1830 35503
Expression level of Genes
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miRNAs possibly regulated by vista5017[chr1:212808477-212808830]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results