EnhancerDB
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  3. vista50178[chr5:172232848-172233147]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50178[chr5:172232848-172233147]
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Tissue distribution of vista50178
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Transcription factor that possibly regulate vista50178[chr5:172232848-172233147]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 172232860 172232869 NKX2-8 JASPAR yes 67829876
chr5 172232860 172232869 NKX2-8 JASPAR yes 70763702
chr5 172232860 172232870 NKX2-3 JASPAR yes 67829877
chr5 172232860 172232870 NKX2-3 JASPAR yes 70763703
chr5 172232861 172232869 ISL2 JASPAR yes 67829878
chr5 172232861 172232869 ISL2 JASPAR yes 70763704
chr5 172232861 172232870 NKX3-2 JASPAR yes 67829879
chr5 172232861 172232870 NKX3-2 JASPAR yes 70763705
chr5 172232871 172232892 ZNF263 JASPAR yes 67829880
chr5 172232871 172232892 ZNF263 JASPAR yes 70763706
chr5 172232874 172232895 ZNF263 JASPAR yes 67829881
chr5 172232874 172232895 ZNF263 JASPAR yes 70763707
chr5 172232880 172232886 MZF1 JASPAR yes 67829882
chr5 172232880 172232886 MZF1 JASPAR yes 70763708
chr5 172232893 172232897 NFE TRANSFAC yes 67829883
chr5 172232893 172232897 NFE TRANSFAC yes 70763709
chr5 172232911 172232916 SP1 TRANSFAC yes 67829884
chr5 172232911 172232916 SP1 TRANSFAC yes 70763710
chr5 172232926 172232930 NFE TRANSFAC yes 67829885
chr5 172232926 172232930 NFE TRANSFAC yes 70763711
chr5 172232926 172232939 SMAD2 JASPAR yes 67829886
chr5 172232926 172232939 SMAD2 JASPAR yes 70763712
chr5 172232929 172232937 MEIS2 JASPAR yes 67829887
chr5 172232929 172232937 MEIS2 JASPAR yes 70763713
chr5 172232930 172232934 NFE TRANSFAC yes 67829888
chr5 172232930 172232934 NFE TRANSFAC yes 70763714
chr5 172232930 172232937 MEIS1 JASPAR yes 67829889
chr5 172232930 172232937 MEIS1 JASPAR yes 70763715
chr5 172232937 172232942 SP1 TRANSFAC yes 67829890
chr5 172232937 172232942 SP1 TRANSFAC yes 70763716
chr5 172232940 172232946 SP1 TRANSFAC yes 67829891
chr5 172232940 172232946 SP1 TRANSFAC yes 70763717
chr5 172232940 172232950 SP1 JASPAR yes 67829892
chr5 172232940 172232950 SP1 JASPAR yes 70763718
chr5 172232969 172232990 IRF1 JASPAR yes 67829893
chr5 172232969 172232990 IRF1 JASPAR yes 70763719
chr5 172232972 172232986 SPI1 JASPAR yes 67829894
chr5 172232972 172232986 SPI1 JASPAR yes 70763720
chr5 172232975 172232996 IRF1 JASPAR yes 67829895
chr5 172232975 172232996 IRF1 JASPAR yes 70763721
chr5 172232977 172232992 PRDM1 JASPAR yes 67829896
chr5 172232977 172232992 PRDM1 JASPAR yes 70763722
chr5 172232991 172232994 MYB TRANSFAC yes 67829897
chr5 172232991 172232994 MYB TRANSFAC yes 70763723
chr5 172232994 172232998 YY1 TRANSFAC yes 67829898
chr5 172232994 172232998 YY1 TRANSFAC yes 70763724
chr5 172233003 172233016 SMAD2 JASPAR yes 67829899
chr5 172233003 172233016 SMAD2 JASPAR yes 70763725
chr5 172233022 172233026 LFA1 TRANSFAC yes 67829900
chr5 172233022 172233026 LFA1 TRANSFAC yes 70763726
chr5 172233025 172233036 FOXA1 JASPAR yes 67829901
chr5 172233025 172233036 FOXA1 JASPAR yes 70763727
chr5 172233036 172233046 SREBF1 JASPAR yes 67829902
chr5 172233036 172233046 SREBF1 JASPAR yes 70763728
chr5 172233038 172233052 TLX1 JASPAR yes 67829903
chr5 172233038 172233052 TLX1 JASPAR yes 70763729
chr5 172233065 172233069 H4TF2 TRANSFAC yes 67829904
chr5 172233065 172233069 H4TF2 TRANSFAC yes 70763730
chr5 172233073 172233084 NFKB1 JASPAR yes 67829905
chr5 172233073 172233084 NFKB1 JASPAR yes 70763731
chr5 172233076 172233091 TFAP2A JASPAR yes 67829906
chr5 172233076 172233091 TFAP2A JASPAR yes 70763732
chr5 172233077 172233091 EBF1 JASPAR yes 67829907
chr5 172233077 172233091 GLIS2 JASPAR yes 67829908
chr5 172233077 172233091 EBF1 JASPAR yes 70763733
chr5 172233077 172233091 GLIS2 JASPAR yes 70763734
chr5 172233078 172233093 TFAP2A JASPAR yes 67829909
chr5 172233078 172233093 TFAP2C JASPAR yes 67829910
chr5 172233078 172233093 TFAP2A JASPAR yes 70763735
chr5 172233078 172233093 TFAP2C JASPAR yes 70763736
chr5 172233079 172233090 EBF1 JASPAR yes 67829911
chr5 172233079 172233090 EBF1 JASPAR yes 70763737
chr5 172233085 172233090 SP1 TRANSFAC yes 67829912
chr5 172233085 172233090 SP1 TRANSFAC yes 70763738
chr5 172233111 172233126 SCRT1 JASPAR yes 67829913
chr5 172233111 172233126 SCRT1 JASPAR yes 70763739
chr5 172233115 172233124 SNAI2 JASPAR yes 67829914
chr5 172233115 172233124 SNAI2 JASPAR yes 70763740
chr5 172233115 172233125 FIGLA JASPAR yes 67829915
chr5 172233115 172233125 ID4 JASPAR yes 67829916
chr5 172233115 172233125 MSC JASPAR yes 67829917
chr5 172233115 172233125 TCF3 JASPAR yes 67829918
chr5 172233115 172233125 TCF4 JASPAR yes 67829919
chr5 172233115 172233125 FIGLA JASPAR yes 70763741
chr5 172233115 172233125 ID4 JASPAR yes 70763742
chr5 172233115 172233125 MSC JASPAR yes 70763743
chr5 172233115 172233125 TCF3 JASPAR yes 70763744
chr5 172233115 172233125 TCF4 JASPAR yes 70763745
chr5 172233117 172233136 RFX2 JASPAR yes 67829920
chr5 172233117 172233136 RFX2 JASPAR yes 70763746
chr5 172233118 172233126 MGA JASPAR yes 67829921
chr5 172233118 172233126 TBX15 JASPAR yes 67829922
chr5 172233118 172233126 TBX1 JASPAR yes 67829923
chr5 172233118 172233126 TBX4 JASPAR yes 67829924
chr5 172233118 172233126 TBX5 JASPAR yes 67829925
chr5 172233118 172233126 MGA JASPAR yes 70763747
chr5 172233118 172233126 TBX15 JASPAR yes 70763748
chr5 172233118 172233126 TBX1 JASPAR yes 70763749
chr5 172233118 172233126 TBX4 JASPAR yes 70763750
chr5 172233118 172233126 TBX5 JASPAR yes 70763751
chr5 172233129 172233134 TFAP2A TRANSFAC yes 67829926
chr5 172233129 172233134 TFAP2A TRANSFAC yes 70763752
chr5 172233129 172233135 MZF1 JASPAR yes 67829927
chr5 172233129 172233135 MZF1 JASPAR yes 70763753
chr5 172233131 172233136 ETS2 TRANSFAC yes 67829928
chr5 172233131 172233136 ETS2 TRANSFAC yes 70763754
SNP sites on vista50178[chr5:172232848-172233147]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 172232902 rs73323106 G C no 8705152
chr5 172232948 rs148761464 C G
SP1
8705153
chr5 172232968 rs370257831 C A,T no 8705154
chr5 172233065 rs2291045 C T
H4TF2
8705155
Genes possibly regulated by vista50178[chr5:172232848-172233147]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 172195093 172198198 - DUSP1 ENSG00000120129.5 172198198 0.79 1.0 5985 65350
chr5 172261278 172379688 + ERGIC1 ENSG00000113719.11 172261278 0.61 1.0 5986 71869
Expression level of Genes
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miRNAs possibly regulated by vista50178[chr5:172232848-172233147]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results