EnhancerDB
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  3. vista5018[chr1:212808992-212809268]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5018[chr1:212808992-212809268]
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Tissue distribution of vista5018
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Transcription factor that possibly regulate vista5018[chr1:212808992-212809268]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 212808947 212809303 RCOR1 UCSC Txn Factor no Conserved 107869203
chr1 212808971 212809591 TEAD4 UCSC Txn Factor no Conserved 107869205
chr1 212808973 212809724 GATA2 UCSC Txn Factor no Conserved 107869208
chr1 212809017 212809567 NR2F2 UCSC Txn Factor no Conserved 107869216
chr1 212808992 212809006 NR2F1 JASPAR yes 35142583
chr1 212808992 212809006 RXRB JASPAR yes 35142584
chr1 212808992 212809006 RXRG JASPAR yes 35142585
chr1 212808992 212809006 NR2F1 JASPAR yes 118454619
chr1 212808992 212809006 RXRB JASPAR yes 118454620
chr1 212808992 212809006 RXRG JASPAR yes 118454621
chr1 212808992 212809007 NR2C2 JASPAR yes 35142586
chr1 212808992 212809007 NR2C2 JASPAR yes 118454622
chr1 212808999 212809002 MYB TRANSFAC yes 35142587
chr1 212808999 212809002 MYB TRANSFAC yes 118454623
chr1 212809025 212809036 CEBPA JASPAR yes 35142588
chr1 212809025 212809036 CEBPA JASPAR yes 118454624
chr1 212809041 212809045 LFA1 TRANSFAC yes 35142589
chr1 212809041 212809045 LFA1 TRANSFAC yes 118454625
chr1 212809058 212809076 MAFF JASPAR yes 35142590
chr1 212809058 212809076 MAFF JASPAR yes 118454626
chr1 212809060 212809075 MAFK JASPAR yes 35142591
chr1 212809060 212809075 MAFK JASPAR yes 118454627
chr1 212809068 212809078 MEOX2 JASPAR yes 35142592
chr1 212809068 212809078 MEOX2 JASPAR yes 118454628
chr1 212809073 212809085 TGIF1 JASPAR yes 35142593
chr1 212809073 212809085 TGIF1 JASPAR yes 118454629
chr1 212809080 212809084 ESR1 TRANSFAC yes 35142594
chr1 212809080 212809084 ESR1 TRANSFAC yes 118454630
chr1 212809091 212809096 GATA2 JASPAR yes 35142595
chr1 212809091 212809096 GATA2 JASPAR yes 118454631
chr1 212809099 212809109 SREBF1 JASPAR yes 35142596
chr1 212809099 212809109 SREBF2 JASPAR yes 35142597
chr1 212809099 212809109 SREBF1 JASPAR yes 118454632
chr1 212809099 212809109 SREBF2 JASPAR yes 118454633
chr1 212809113 212809128 FOXP1 JASPAR yes 35142598
chr1 212809113 212809128 FOXP1 JASPAR yes 118454634
chr1 212809116 212809127 FOXP2 JASPAR yes 35142599
chr1 212809116 212809127 FOXP2 JASPAR yes 118454635
chr1 212809120 212809126 HiNF-A TRANSFAC yes 35142600
chr1 212809120 212809126 HiNF-A TRANSFAC yes 118454636
chr1 212809134 212809138 ESR1 TRANSFAC yes 35142601
chr1 212809134 212809138 ESR1 TRANSFAC yes 118454637
chr1 212809139 212809150 EBF1 JASPAR yes 35142602
chr1 212809139 212809150 EBF1 JASPAR yes 118454638
chr1 212809174 212809185 FOXA1 JASPAR yes 35142603
chr1 212809174 212809185 FOXA1 JASPAR yes 118454639
chr1 212809177 212809184 SPIB JASPAR yes 35142604
chr1 212809177 212809184 SPIB JASPAR yes 118454640
chr1 212809181 212809195 GATA2 JASPAR yes 35142605
chr1 212809181 212809195 GATA2 JASPAR yes 118454641
chr1 212809186 212809189 MYB TRANSFAC yes 35142606
chr1 212809186 212809189 MYB TRANSFAC yes 118454642
chr1 212809200 212809205 SP1 TRANSFAC yes 35142607
chr1 212809200 212809205 SP1 TRANSFAC yes 118454643
chr1 212809200 212809211 ELF5 JASPAR yes 35142608
chr1 212809200 212809211 ELF5 JASPAR yes 118454644
chr1 212809203 212809209 ETS1 JASPAR yes 35142609
chr1 212809203 212809209 SPI1 JASPAR yes 35142610
chr1 212809203 212809209 ETS1 JASPAR yes 118454645
chr1 212809203 212809209 SPI1 JASPAR yes 118454646
chr1 212809207 212809219 INSM1 JASPAR yes 35142611
chr1 212809207 212809219 INSM1 JASPAR yes 118454647
chr1 212809214 212809234 RREB1 JASPAR yes 35142612
chr1 212809214 212809234 RREB1 JASPAR yes 118454648
chr1 212809215 212809235 RREB1 JASPAR yes 35142613
chr1 212809215 212809235 RREB1 JASPAR yes 118454649
chr1 212809216 212809236 RREB1 JASPAR yes 35142614
chr1 212809216 212809236 RREB1 JASPAR yes 118454650
chr1 212809220 212809225 SP1 TRANSFAC yes 35142615
chr1 212809220 212809225 SP1 TRANSFAC yes 118454651
chr1 212809230 212809241 NFKB1 JASPAR yes 35142616
chr1 212809230 212809241 NFKB1 JASPAR yes 118454652
chr1 212809234 212809248 PLAG1 JASPAR yes 35142617
chr1 212809234 212809248 PLAG1 JASPAR yes 118454653
chr1 212809244 212809249 SP1 TRANSFAC yes 35142618
chr1 212809244 212809249 SP1 TRANSFAC yes 118454654
chr1 212809254 212809260 YY1 JASPAR yes 35142619
chr1 212809254 212809260 YY1 JASPAR yes 118454655
chr1 212809254 212809271 ZNF410 JASPAR yes 35142620
chr1 212809254 212809271 ZNF410 JASPAR yes 118454656
chr1 212809266 212809270 YY1 TRANSFAC yes 35142621
chr1 212809266 212809270 YY1 TRANSFAC yes 118454657
SNP sites on vista5018[chr1:212808992-212809268]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 212809141 rs186699949 G T
EBF1 GATA2 NR2F2 RCOR1 TEAD4
924649
Genes possibly regulated by vista5018[chr1:212808992-212809268]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 212738676 212794119 + ATF3 ENSG00000162772.12 212738676 0.8 1.0 1828 29684
chr1 212797789 212800120 + FAM71A ENSG00000162771.6 212797789 0.96 1.0 1829 88797
chr1 212859760 212873327 - BATF3 ENSG00000123685.4 212873327 0.87 1.0 1830 35941
Expression level of Genes
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miRNAs possibly regulated by vista5018[chr1:212808992-212809268]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results