EnhancerDB
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  3. vista50183[chr5:172281377-172281706]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50183[chr5:172281377-172281706]
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Tissue distribution of vista50183
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Transcription factor that possibly regulate vista50183[chr5:172281377-172281706]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 172281376 172281380 NFE TRANSFAC yes 67835059
chr5 172281376 172281380 NFE TRANSFAC yes 70764050
chr5 172281386 172281407 IRF1 JASPAR yes 67835060
chr5 172281386 172281407 IRF1 JASPAR yes 70764051
chr5 172281388 172281403 IRF9 JASPAR yes 67835061
chr5 172281388 172281403 IRF9 JASPAR yes 70764052
chr5 172281390 172281404 STAT1 JASPAR yes 67835062
chr5 172281390 172281404 STAT1 JASPAR yes 70764053
chr5 172281390 172281405 PRDM1 JASPAR yes 67835063
chr5 172281390 172281405 STAT2 JASPAR yes 67835064
chr5 172281390 172281405 PRDM1 JASPAR yes 70764054
chr5 172281390 172281405 STAT2 JASPAR yes 70764055
chr5 172281410 172281426 SOX8 JASPAR yes 67835065
chr5 172281410 172281426 SOX8 JASPAR yes 70764056
chr5 172281424 172281430 TCF4 TRANSFAC yes 67835066
chr5 172281424 172281430 TCF4 TRANSFAC yes 70764057
chr5 172281428 172281438 HOXD13 JASPAR yes 67835067
chr5 172281428 172281438 HOXD13 JASPAR yes 70764058
chr5 172281430 172281434 TEAD2 TRANSFAC yes 67835068
chr5 172281430 172281434 TEAD2 TRANSFAC yes 70764059
chr5 172281430 172281435 TBP TRANSFAC yes 67835069
chr5 172281430 172281435 TBP TRANSFAC yes 70764060
chr5 172281430 172281436 TFIID TRANSFAC yes 67835070
chr5 172281430 172281436 TFIID TRANSFAC yes 70764061
chr5 172281438 172281450 E2F8 JASPAR yes 67835071
chr5 172281438 172281450 E2F8 JASPAR yes 70764062
chr5 172281441 172281456 FOXP1 JASPAR yes 67835072
chr5 172281441 172281456 FOXP1 JASPAR yes 70764063
chr5 172281444 172281459 STAT2 JASPAR yes 67835073
chr5 172281444 172281459 STAT2 JASPAR yes 70764064
chr5 172281448 172281466 NR3C1 JASPAR yes 67835074
chr5 172281448 172281466 NR3C1 JASPAR yes 70764065
chr5 172281456 172281460 YY1 TRANSFAC yes 67835075
chr5 172281456 172281460 YY1 TRANSFAC yes 70764066
chr5 172281456 172281468 EHF JASPAR yes 67835076
chr5 172281456 172281468 EHF JASPAR yes 70764067
chr5 172281456 172281469 ELF1 JASPAR yes 67835077
chr5 172281456 172281469 ELF1 JASPAR yes 70764068
chr5 172281457 172281465 FEV JASPAR yes 67835078
chr5 172281457 172281465 FEV JASPAR yes 70764069
chr5 172281463 172281475 INSM1 JASPAR yes 67835079
chr5 172281463 172281475 INSM1 JASPAR yes 70764070
chr5 172281468 172281473 SP1 TRANSFAC yes 67835080
chr5 172281468 172281473 SP1 TRANSFAC yes 70764071
chr5 172281475 172281479 NFE TRANSFAC yes 67835081
chr5 172281475 172281479 NFE TRANSFAC yes 70764072
chr5 172281526 172281536 ZNF740 JASPAR yes 67835082
chr5 172281526 172281536 ZNF740 JASPAR yes 70764073
chr5 172281529 172281549 RREB1 JASPAR yes 67835083
chr5 172281529 172281549 RREB1 JASPAR yes 70764074
chr5 172281530 172281540 SP1 JASPAR yes 67835084
chr5 172281530 172281540 SP1 JASPAR yes 70764075
chr5 172281532 172281552 RREB1 JASPAR yes 67835085
chr5 172281532 172281552 RREB1 JASPAR yes 70764076
chr5 172281533 172281553 RREB1 JASPAR yes 67835086
chr5 172281533 172281553 RREB1 JASPAR yes 70764077
chr5 172281540 172281551 GCM1 JASPAR yes 67835087
chr5 172281540 172281551 GCM1 JASPAR yes 70764078
chr5 172281540 172281555 RUNX2 JASPAR yes 67835088
chr5 172281540 172281555 RUNX2 JASPAR yes 70764079
chr5 172281541 172281551 GCM2 JASPAR yes 67835089
chr5 172281541 172281551 GCM2 JASPAR yes 70764080
chr5 172281563 172281567 NFE TRANSFAC yes 67835090
chr5 172281563 172281567 NFE TRANSFAC yes 70764081
chr5 172281578 172281588 HINFP JASPAR yes 67835091
chr5 172281578 172281588 HINFP JASPAR yes 70764082
chr5 172281578 172281590 HINFP JASPAR yes 67835092
chr5 172281578 172281590 HINFP JASPAR yes 70764083
chr5 172281590 172281594 H4TF2 TRANSFAC yes 67835093
chr5 172281590 172281594 H4TF2 TRANSFAC yes 70764084
chr5 172281594 172281614 RREB1 JASPAR yes 67835094
chr5 172281594 172281614 RREB1 JASPAR yes 70764085
chr5 172281596 172281616 RREB1 JASPAR yes 67835095
chr5 172281596 172281616 RREB1 JASPAR yes 70764086
chr5 172281601 172281621 RREB1 JASPAR yes 67835096
chr5 172281601 172281621 RREB1 JASPAR yes 70764087
chr5 172281604 172281624 RREB1 JASPAR yes 67835097
chr5 172281604 172281624 RREB1 JASPAR yes 70764088
chr5 172281606 172281626 RREB1 JASPAR yes 67835098
chr5 172281606 172281626 RREB1 JASPAR yes 70764089
chr5 172281613 172281625 GLI2 JASPAR yes 67835099
chr5 172281613 172281625 GLI2 JASPAR yes 70764090
chr5 172281639 172281645 MAZ TRANSFAC yes 67835100
chr5 172281639 172281645 MAZ TRANSFAC yes 70764091
chr5 172281642 172281662 ESR1 JASPAR yes 67835101
chr5 172281642 172281662 ESR1 JASPAR yes 70764092
chr5 172281647 172281667 TP63 JASPAR yes 67835102
chr5 172281647 172281667 TP63 JASPAR yes 70764093
chr5 172281662 172281673 E2F4 JASPAR yes 67835103
chr5 172281662 172281673 E2F6 JASPAR yes 67835104
chr5 172281662 172281673 E2F4 JASPAR yes 70764094
chr5 172281662 172281673 E2F6 JASPAR yes 70764095
chr5 172281663 172281674 E2F1 JASPAR yes 67835105
chr5 172281663 172281674 E2F1 JASPAR yes 70764096
chr5 172281681 172281693 NHLH1 JASPAR yes 67835106
chr5 172281681 172281693 NHLH1 JASPAR yes 70764097
chr5 172281682 172281692 NHLH1 JASPAR yes 67835107
chr5 172281682 172281692 NHLH1 JASPAR yes 70764098
chr5 172281693 172281711 ESR1 JASPAR yes 67835108
chr5 172281693 172281711 ESR1 JASPAR yes 70764099
chr5 172281698 172281715 PAX1 JASPAR yes 67835109
chr5 172281698 172281715 PAX9 JASPAR yes 67835110
chr5 172281698 172281715 PAX1 JASPAR yes 70764100
chr5 172281698 172281715 PAX9 JASPAR yes 70764101
SNP sites on vista50183[chr5:172281377-172281706]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 172281416 rs79052718 T C,G
SOX8
8705714
chr5 172281464 rs77917168 T C
EHF ELF1 FEV INSM1 NR3C1
8705715
chr5 172281465 rs116441927 G A
EHF ELF1 FEV INSM1 NR3C1
8705716
chr5 172281662 rs77589581 C T
E2F4 E2F6 ESR1 TP63
8705717
Genes possibly regulated by vista50183[chr5:172281377-172281706]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 172195093 172198198 - DUSP1 ENSG00000120129.5 172198198 0.79 1.0 5985 16821
chr5 172261278 172379688 + ERGIC1 ENSG00000113719.11 172261278 0.61 1.0 5986 79901
Expression level of Genes
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miRNAs possibly regulated by vista50183[chr5:172281377-172281706]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results