EnhancerDB
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  3. vista5019[chr1:212809966-212810356]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5019[chr1:212809966-212810356]
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Tissue distribution of vista5019
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Transcription factor that possibly regulate vista5019[chr1:212809966-212810356]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 212810004 212810556 GATA2 UCSC Txn Factor no Conserved 107869229
chr1 212810030 212810486 JUND UCSC Txn Factor no Conserved 107869233
chr1 212810099 212810415 EP300 UCSC Txn Factor no Conserved 107869243
chr1 212810113 212810372 TEAD4 UCSC Txn Factor no Conserved 107869247
chr1 212810187 212810348 RCOR1 UCSC Txn Factor no Conserved 107869256
chr1 212810250 212810403 GATA3 UCSC Txn Factor no Conserved 107869260
chr1 212809975 212809980 ETS2 TRANSFAC yes 35142737
chr1 212809975 212809980 ETS2 TRANSFAC yes 118454658
chr1 212809975 212809983 EHF JASPAR yes 35142738
chr1 212809975 212809983 EHF JASPAR yes 118454659
chr1 212809979 212809997 NR3C1 JASPAR yes 35142739
chr1 212809979 212809997 NR3C1 JASPAR yes 118454660
chr1 212809986 212809990 YY1 TRANSFAC yes 35142740
chr1 212809986 212809990 YY1 TRANSFAC yes 118454661
chr1 212809986 212810007 IRF1 JASPAR yes 35142741
chr1 212809986 212810007 IRF1 JASPAR yes 118454662
chr1 212809988 212810003 PRDM1 JASPAR yes 35142742
chr1 212809988 212810003 PRDM1 JASPAR yes 118454663
chr1 212810002 212810020 SRF JASPAR yes 35142743
chr1 212810002 212810020 SRF JASPAR yes 118454664
chr1 212810003 212810021 SRF JASPAR yes 35142744
chr1 212810003 212810021 SRF JASPAR yes 118454665
chr1 212810009 212810015 TBP TRANSFAC yes 35142745
chr1 212810009 212810015 TBP TRANSFAC yes 118454666
chr1 212810010 212810025 PRDM1 JASPAR yes 35142746
chr1 212810010 212810025 STAT2 JASPAR yes 35142747
chr1 212810010 212810025 PRDM1 JASPAR yes 118454667
chr1 212810010 212810025 STAT2 JASPAR yes 118454668
chr1 212810012 212810033 IRF1 JASPAR yes 35142748
chr1 212810012 212810033 IRF1 JASPAR yes 118454669
chr1 212810014 212810019 ETS2 TRANSFAC yes 35142749
chr1 212810014 212810019 ETS2 TRANSFAC yes 118454670
chr1 212810016 212810030 STAT1 JASPAR yes 35142750
chr1 212810016 212810030 STAT1 JASPAR yes 118454671
chr1 212810016 212810031 PRDM1 JASPAR yes 35142751
chr1 212810016 212810031 STAT2 JASPAR yes 35142752
chr1 212810016 212810031 PRDM1 JASPAR yes 118454672
chr1 212810016 212810031 STAT2 JASPAR yes 118454673
chr1 212810016 212810034 IRF2 JASPAR yes 35142753
chr1 212810016 212810034 IRF2 JASPAR yes 118454674
chr1 212810019 212810024 ETS2 TRANSFAC yes 35142754
chr1 212810019 212810024 ETS2 TRANSFAC yes 118454675
chr1 212810025 212810046 IRF1 JASPAR yes 35142755
chr1 212810025 212810046 IRF1 JASPAR yes 118454676
chr1 212810029 212810043 SPI1 JASPAR yes 35142756
chr1 212810029 212810043 SPIC JASPAR yes 35142757
chr1 212810029 212810043 SPI1 JASPAR yes 118454677
chr1 212810029 212810043 SPIC JASPAR yes 118454678
chr1 212810030 212810043 ELF1 JASPAR yes 35142758
chr1 212810030 212810043 ELF1 JASPAR yes 118454679
chr1 212810031 212810044 ELF3 JASPAR yes 35142759
chr1 212810031 212810044 ELF3 JASPAR yes 118454680
chr1 212810032 212810043 ELF5 JASPAR yes 35142760
chr1 212810032 212810043 ELF5 JASPAR yes 118454681
chr1 212810033 212810044 FLI1 JASPAR yes 35142761
chr1 212810033 212810044 FLI1 JASPAR yes 118454682
chr1 212810043 212810053 POU6F2 JASPAR yes 35142762
chr1 212810043 212810053 POU6F2 JASPAR yes 118454683
chr1 212810045 212810055 HOXC10 JASPAR yes 35142763
chr1 212810045 212810055 HOXD11 JASPAR yes 35142764
chr1 212810045 212810055 HOXC10 JASPAR yes 118454684
chr1 212810045 212810055 HOXD11 JASPAR yes 118454685
chr1 212810047 212810051 YY1 TRANSFAC yes 35142765
chr1 212810047 212810051 YY1 TRANSFAC yes 118454686
chr1 212810057 212810068 DMRT3 JASPAR yes 35142766
chr1 212810057 212810068 DMRT3 JASPAR yes 118454687
chr1 212810074 212810077 MYB TRANSFAC yes 35142767
chr1 212810074 212810077 MYB TRANSFAC yes 118454688
chr1 212810077 212810091 STAT1 JASPAR yes 35142768
chr1 212810077 212810091 STAT1 JASPAR yes 118454689
chr1 212810078 212810090 IRF1 JASPAR yes 35142769
chr1 212810078 212810090 IRF1 JASPAR yes 118454690
chr1 212810083 212810087 YY1 TRANSFAC yes 35142770
chr1 212810083 212810087 YY1 TRANSFAC yes 118454691
chr1 212810084 212810095 CEBPA JASPAR yes 35142771
chr1 212810084 212810095 CEBPA JASPAR yes 118454692
chr1 212810111 212810126 HNF4A JASPAR yes 35142772
chr1 212810111 212810126 HNF4A JASPAR yes 118454693
chr1 212810126 212810132 ZNF354C JASPAR yes 35142773
chr1 212810126 212810132 ZNF354C JASPAR yes 118454694
chr1 212810138 212810152 CREB3L1 JASPAR yes 35142774
chr1 212810138 212810152 CREB3L1 JASPAR yes 118454695
chr1 212810176 212810188 NHLH1 JASPAR yes 35142775
chr1 212810176 212810188 NHLH1 JASPAR yes 118454696
chr1 212810177 212810187 NHLH1 JASPAR yes 35142776
chr1 212810177 212810187 NHLH1 JASPAR yes 118454697
chr1 212810191 212810205 TLX1 JASPAR yes 35142777
chr1 212810191 212810205 TLX1 JASPAR yes 118454698
chr1 212810192 212810196 LFA1 TRANSFAC yes 35142778
chr1 212810192 212810196 LFA1 TRANSFAC yes 118454699
chr1 212810192 212810206 TLX1 JASPAR yes 35142779
chr1 212810192 212810206 TLX1 JASPAR yes 118454700
chr1 212810213 212810218 SP1 TRANSFAC yes 35142780
chr1 212810213 212810218 SP1 TRANSFAC yes 118454701
chr1 212810217 212810227 ETV5 JASPAR yes 35142781
chr1 212810217 212810227 ETV5 JASPAR yes 118454702
chr1 212810257 212810271 GATA2 JASPAR yes 35142782
chr1 212810257 212810271 GATA2 JASPAR yes 118454703
chr1 212810261 212810269 GATA5 JASPAR yes 35142783
chr1 212810261 212810269 GATA5 JASPAR yes 118454704
chr1 212810305 212810312 SPIB JASPAR yes 35142784
chr1 212810305 212810312 SPIB JASPAR yes 118454705
chr1 212810340 212810350 GSC JASPAR yes 35142785
chr1 212810340 212810350 GSC JASPAR yes 118454706
chr1 212810341 212810349 RHOXF1 JASPAR yes 35142786
chr1 212810341 212810349 RHOXF1 JASPAR yes 118454707
chr1 212810341 212810350 PITX3 JASPAR yes 35142787
chr1 212810341 212810350 PITX3 JASPAR yes 118454708
SNP sites on vista5019[chr1:212809966-212810356]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 212810001 rs3125300 A G
IRF1 PRDM1
924655
chr1 212810095 rs61830700 C T
CEBPA GATA2 JUND
924656
chr1 212810142 rs3125301 T G
CREB3L1 EP300 GATA2 JUND TEAD4
924657
chr1 212810148 rs74138598 G A
CREB3L1 EP300 GATA2 JUND TEAD4
924658
chr1 212810199 rs144809581 G A
EP300 GATA2 JUND RCOR1 TEAD4 TLX1
924659
Genes possibly regulated by vista5019[chr1:212809966-212810356]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 212738676 212794119 + ATF3 ENSG00000162772.12 212738676 0.8 1.0 1828 28710
chr1 212797789 212800120 + FAM71A ENSG00000162771.6 212797789 0.96 1.0 1829 87823
chr1 212859760 212873327 - BATF3 ENSG00000123685.4 212873327 0.87 1.0 1830 37029
Expression level of Genes
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miRNAs possibly regulated by vista5019[chr1:212809966-212810356]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results