EnhancerDB
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  3. vista50207[chr5:172710965-172711353]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50207[chr5:172710965-172711353]
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Tissue distribution of vista50207
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Transcription factor that possibly regulate vista50207[chr5:172710965-172711353]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 172710548 172711198 E2F1 UCSC Txn Factor no Conserved 108537547
chr5 172710673 172711183 E2F6 UCSC Txn Factor no Conserved 108537548
chr5 172710705 172711109 MXI1 UCSC Txn Factor no Conserved 108537549
chr5 172710722 172711158 MAX UCSC Txn Factor no Conserved 108537550
chr5 172710726 172711160 MYC UCSC Txn Factor no Conserved 108537551
chr5 172710839 172711209 CTCF UCSC Txn Factor no Conserved 108537552
chr5 172710869 172711146 RAD21 UCSC Txn Factor no Conserved 108537553
chr5 172710964 172710973 THAP1 JASPAR yes 67863090
chr5 172710964 172710973 THAP1 JASPAR yes 70765398
chr5 172710965 172710977 TFAP2A JASPAR yes 67863091
chr5 172710965 172710977 TFAP2C JASPAR yes 67863092
chr5 172710965 172710977 TFAP2A JASPAR yes 70765399
chr5 172710965 172710977 TFAP2C JASPAR yes 70765400
chr5 172711004 172711023 CTCF JASPAR yes 67863093
chr5 172711004 172711023 CTCF JASPAR yes 70765401
chr5 172711006 172711012 NFE2 TRANSFAC yes 67863094
chr5 172711006 172711012 NFE2 TRANSFAC yes 70765402
chr5 172711029 172711040 NFKB1 JASPAR yes 67863095
chr5 172711029 172711040 NFKB1 JASPAR yes 70765403
chr5 172711074 172711084 SREBF1 JASPAR yes 67863096
chr5 172711074 172711084 SREBF2 JASPAR yes 67863097
chr5 172711074 172711084 SREBF1 JASPAR yes 70765404
chr5 172711074 172711084 SREBF2 JASPAR yes 70765405
chr5 172711127 172711132 MYC TRANSFAC yes 67863098
chr5 172711127 172711132 MYC TRANSFAC yes 70765406
chr5 172711130 172711147 PAX9 JASPAR yes 67863099
chr5 172711130 172711147 PAX9 JASPAR yes 70765407
chr5 172711161 172711173 HES5 JASPAR yes 67863100
chr5 172711161 172711173 HES7 JASPAR yes 67863101
chr5 172711161 172711173 HES5 JASPAR yes 70765408
chr5 172711161 172711173 HES7 JASPAR yes 70765409
chr5 172711162 172711172 BHLHE40 JASPAR yes 67863102
chr5 172711162 172711172 BHLHE41 JASPAR yes 67863103
chr5 172711162 172711172 HEY1 JASPAR yes 67863104
chr5 172711162 172711172 HEY2 JASPAR yes 67863105
chr5 172711162 172711172 MAX JASPAR yes 67863106
chr5 172711162 172711172 MNT JASPAR yes 67863107
chr5 172711162 172711172 TFE3 JASPAR yes 67863108
chr5 172711162 172711172 BHLHE40 JASPAR yes 70765410
chr5 172711162 172711172 BHLHE41 JASPAR yes 70765411
chr5 172711162 172711172 HEY1 JASPAR yes 70765412
chr5 172711162 172711172 HEY2 JASPAR yes 70765413
chr5 172711162 172711172 MAX JASPAR yes 70765414
chr5 172711162 172711172 MNT JASPAR yes 70765415
chr5 172711162 172711172 TFE3 JASPAR yes 70765416
chr5 172711164 172711169 MYC TRANSFAC yes 67863109
chr5 172711164 172711169 USF1 TRANSFAC yes 67863110
chr5 172711164 172711169 USF2 TRANSFAC yes 67863111
chr5 172711164 172711169 MYC TRANSFAC yes 70765417
chr5 172711164 172711169 USF1 TRANSFAC yes 70765418
chr5 172711164 172711169 USF2 TRANSFAC yes 70765419
chr5 172711177 172711190 ZBTB18 JASPAR yes 67863112
chr5 172711177 172711190 ZBTB18 JASPAR yes 70765420
chr5 172711178 172711190 NHLH1 JASPAR yes 67863113
chr5 172711178 172711190 NHLH1 JASPAR yes 70765421
chr5 172711179 172711189 NHLH1 JASPAR yes 67863114
chr5 172711179 172711189 NHLH1 JASPAR yes 70765422
chr5 172711189 172711201 GRHL1 JASPAR yes 67863115
chr5 172711189 172711201 GRHL1 JASPAR yes 70765423
chr5 172711190 172711200 TFCP2 JASPAR yes 67863116
chr5 172711190 172711200 TFCP2 JASPAR yes 70765424
chr5 172711210 172711214 ESR1 TRANSFAC yes 67863117
chr5 172711210 172711214 ESR1 TRANSFAC yes 70765425
chr5 172711211 172711221 NHLH1 JASPAR yes 67863118
chr5 172711211 172711221 NHLH1 JASPAR yes 70765426
chr5 172711289 172711295 MYC TRANSFAC yes 67863119
chr5 172711289 172711295 MYC TRANSFAC yes 70765427
chr5 172711324 172711332 GATA3 JASPAR yes 67863120
chr5 172711324 172711332 GATA3 JASPAR yes 70765428
chr5 172711340 172711349 NKX3-2 JASPAR yes 67863121
chr5 172711340 172711349 NKX3-2 JASPAR yes 70765429
chr5 172711340 172711350 NKX2-3 JASPAR yes 67863122
chr5 172711340 172711350 NKX2-3 JASPAR yes 70765430
chr5 172711344 172711362 MAFF JASPAR yes 67863123
chr5 172711344 172711362 MAFF JASPAR yes 70765431
chr5 172711346 172711357 NRL JASPAR yes 67863124
chr5 172711346 172711357 NRL JASPAR yes 70765432
chr5 172711346 172711361 MAFK JASPAR yes 67863125
chr5 172711346 172711361 MAFK JASPAR yes 70765433
chr5 172711346 172711367 MAFG JASPAR yes 67863126
chr5 172711346 172711367 MAFG JASPAR yes 70765434
SNP sites on vista50207[chr5:172710965-172711353]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 172710984 rs192556984 G A
CTCF E2F1 E2F6 MAX MXI1 MYC RAD21
8708541
chr5 172711035 rs144507543 T G
CTCF E2F1 E2F6 MAX MXI1 MYC NFKB1 RAD21
8708542
chr5 172711040 rs4388226 C T
CTCF E2F1 E2F6 MAX MXI1 MYC NFKB1 RAD21
8708543
chr5 172711069 rs534205501 C T
CTCF E2F1 E2F6 MAX MXI1 MYC RAD21
8708544
chr5 172711073 rs62378338 A T
CTCF E2F1 E2F6 MAX MXI1 MYC RAD21
8708545
chr5 172711074 rs140255238 C T
CTCF E2F1 E2F6 MAX MXI1 MYC RAD21 SREBF1 SREBF2
8708546
chr5 172711187 rs75082556 G C
CTCF E2F1 NHLH1 ZBTB18
8708547
Genes possibly regulated by vista50207[chr5:172710965-172711353]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 172659112 172662360 - NKX2-5 ENSG00000183072.9 172662360 0.98 0.99 5991 51395
chr5 172741716 172756506 - STC2 ENSG00000113739.6 172756506 0.92 1.0 5992 54847
Expression level of Genes
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miRNAs possibly regulated by vista50207[chr5:172710965-172711353]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results