EnhancerDB
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  3. vista50212[chr5:172880266-172880558]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50212[chr5:172880266-172880558]
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Tissue distribution of vista50212
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Transcription factor that possibly regulate vista50212[chr5:172880266-172880558]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 172880157 172880653 GATA3 UCSC Txn Factor no Conserved 108537564
chr5 172880277 172880521 ESR1 UCSC Txn Factor no Conserved 108537565
chr5 172880283 172880296 SCRT2 JASPAR yes 67872542
chr5 172880283 172880296 SCRT2 JASPAR yes 70765657
chr5 172880291 172880302 FOXB1 JASPAR yes 67872543
chr5 172880291 172880302 FOXB1 JASPAR yes 70765658
chr5 172880308 172880322 JUN JASPAR yes 67872544
chr5 172880308 172880322 JUN JASPAR yes 70765659
chr5 172880312 172880323 FOS JASPAR yes 67872545
chr5 172880312 172880323 FOSL1 JASPAR yes 67872546
chr5 172880312 172880323 FOS JASPAR yes 70765660
chr5 172880312 172880323 FOSL1 JASPAR yes 70765661
chr5 172880314 172880320 JUN TRANSFAC yes 67872547
chr5 172880314 172880320 JUN TRANSFAC yes 70765662
chr5 172880350 172880354 YY1 TRANSFAC yes 67872548
chr5 172880350 172880354 YY1 TRANSFAC yes 70765663
chr5 172880350 172880363 POU2F2 JASPAR yes 67872549
chr5 172880350 172880363 POU2F2 JASPAR yes 70765664
chr5 172880371 172880375 NFE TRANSFAC yes 67872550
chr5 172880371 172880375 NFE TRANSFAC yes 70765665
chr5 172880384 172880395 FOXA1 JASPAR yes 67872551
chr5 172880384 172880395 FOXA1 JASPAR yes 70765666
chr5 172880387 172880407 ESR1 JASPAR yes 67872552
chr5 172880387 172880407 ESR1 JASPAR yes 70765667
chr5 172880388 172880399 NFE2L2 JASPAR yes 67872553
chr5 172880388 172880399 NFE2L2 JASPAR yes 70765668
chr5 172880390 172880408 ESR1 JASPAR yes 67872554
chr5 172880390 172880408 ESR2 JASPAR yes 67872555
chr5 172880390 172880408 ESR1 JASPAR yes 70765669
chr5 172880390 172880408 ESR2 JASPAR yes 70765670
chr5 172880391 172880408 ESR1 JASPAR yes 67872556
chr5 172880391 172880408 ESR1 JASPAR yes 70765671
chr5 172880391 172880409 ESR1 JASPAR yes 67872557
chr5 172880391 172880409 ESR2 JASPAR yes 67872558
chr5 172880391 172880409 ESR1 JASPAR yes 70765672
chr5 172880391 172880409 ESR2 JASPAR yes 70765673
chr5 172880392 172880407 ESR2 JASPAR yes 67872559
chr5 172880392 172880407 ESR2 JASPAR yes 70765674
chr5 172880392 172880412 ESR1 JASPAR yes 67872560
chr5 172880392 172880412 ESR1 JASPAR yes 70765675
chr5 172880402 172880420 TP63 JASPAR yes 67872561
chr5 172880402 172880420 TP63 JASPAR yes 70765676
chr5 172880403 172880409 PTF TRANSFAC yes 67872562
chr5 172880403 172880409 PTF TRANSFAC yes 70765677
chr5 172880424 172880438 ONECUT1 JASPAR yes 67872563
chr5 172880424 172880438 ONECUT1 JASPAR yes 70765678
chr5 172880427 172880437 CUX1 JASPAR yes 67872564
chr5 172880427 172880437 CUX2 JASPAR yes 67872565
chr5 172880427 172880437 CUX1 JASPAR yes 70765679
chr5 172880427 172880437 CUX2 JASPAR yes 70765680
chr5 172880429 172880440 HOXA10 JASPAR yes 67872566
chr5 172880429 172880440 HOXA10 JASPAR yes 70765681
chr5 172880430 172880440 HOXB13 JASPAR yes 67872567
chr5 172880430 172880440 HOXD13 JASPAR yes 67872568
chr5 172880430 172880440 HOXB13 JASPAR yes 70765682
chr5 172880430 172880440 HOXD13 JASPAR yes 70765683
chr5 172880434 172880440 TBP TRANSFAC yes 67872569
chr5 172880434 172880440 TBP TRANSFAC yes 70765684
chr5 172880441 172880445 YY1 TRANSFAC yes 67872570
chr5 172880441 172880445 YY1 TRANSFAC yes 70765685
chr5 172880445 172880449 YY1 TRANSFAC yes 67872571
chr5 172880445 172880449 YY1 TRANSFAC yes 70765686
chr5 172880457 172880472 LEF1 JASPAR yes 67872572
chr5 172880457 172880472 LEF1 JASPAR yes 70765687
chr5 172880470 172880480 TEAD1 JASPAR yes 67872573
chr5 172880470 172880480 TEAD4 JASPAR yes 67872574
chr5 172880470 172880480 TEAD1 JASPAR yes 70765688
chr5 172880470 172880480 TEAD4 JASPAR yes 70765689
chr5 172880470 172880482 TEAD1 JASPAR yes 67872575
chr5 172880470 172880482 TEAD1 JASPAR yes 70765690
chr5 172880471 172880479 TEAD3 JASPAR yes 67872576
chr5 172880471 172880479 TEAD3 JASPAR yes 70765691
chr5 172880480 172880490 NHLH1 JASPAR yes 67872577
chr5 172880480 172880490 NHLH1 JASPAR yes 70765692
chr5 172880506 172880511 GATA2 JASPAR yes 67872578
chr5 172880506 172880511 GATA2 JASPAR yes 70765693
chr5 172880507 172880513 ZNF354C JASPAR yes 67872579
chr5 172880507 172880513 ZNF354C JASPAR yes 70765694
chr5 172880543 172880547 LFA1 TRANSFAC yes 67872580
chr5 172880543 172880547 LFA1 TRANSFAC yes 70765695
SNP sites on vista50212[chr5:172880266-172880558]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 172880282 rs75835602 T C
ESR1 GATA3
8709604
chr5 172880333 rs539631543 A G
ESR1 GATA3
8709605
chr5 172880351 rs113928772 T C
ESR1 GATA3 POU2F2 YY1
8709606
chr5 172880489 rs75298477 C T
ESR1 GATA3 NHLH1
8709607
chr5 172880509 rs57868797 T G
ESR1 GATA2 GATA3 ZNF354C
8709608
Genes possibly regulated by vista50212[chr5:172880266-172880558]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista50212[chr5:172880266-172880558]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results