EnhancerDB
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  3. vista50213[chr5:172881373-172881649]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50213[chr5:172881373-172881649]
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Tissue distribution of vista50213
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Transcription factor that possibly regulate vista50213[chr5:172881373-172881649]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 172881263 172882779 POLR2A UCSC Txn Factor no Conserved 108537566
chr5 172881263 172882779 POLR2A UCSC Txn Factor no Conserved 108537567
chr5 172881366 172881386 TP53 JASPAR yes 67872690
chr5 172881366 172881386 TP53 JASPAR yes 70765696
chr5 172881373 172881383 RELA JASPAR yes 67872691
chr5 172881373 172881383 REL JASPAR yes 67872692
chr5 172881373 172881383 RELA JASPAR yes 70765697
chr5 172881373 172881383 REL JASPAR yes 70765698
chr5 172881375 172881385 TEAD1 JASPAR yes 67872693
chr5 172881375 172881385 TEAD4 JASPAR yes 67872694
chr5 172881375 172881385 TEAD1 JASPAR yes 70765699
chr5 172881375 172881385 TEAD4 JASPAR yes 70765700
chr5 172881375 172881387 TEAD1 JASPAR yes 67872695
chr5 172881375 172881387 TEAD1 JASPAR yes 70765701
chr5 172881376 172881384 TEAD3 JASPAR yes 67872696
chr5 172881376 172881384 TEAD3 JASPAR yes 70765702
chr5 172881379 172881398 CTCF JASPAR yes 67872697
chr5 172881379 172881398 CTCF JASPAR yes 70765703
chr5 172881392 172881400 TBX15 JASPAR yes 67872698
chr5 172881392 172881400 TBX15 JASPAR yes 70765704
chr5 172881393 172881398 SP1 TRANSFAC yes 67872699
chr5 172881393 172881398 SP1 TRANSFAC yes 70765705
chr5 172881439 172881443 TEAD2 TRANSFAC yes 67872700
chr5 172881439 172881443 TEAD2 TRANSFAC yes 70765706
chr5 172881439 172881455 NFYA JASPAR yes 67872701
chr5 172881439 172881455 NFYA JASPAR yes 70765707
chr5 172881441 172881444 MYB TRANSFAC yes 67872702
chr5 172881441 172881444 MYB TRANSFAC yes 70765708
chr5 172881444 172881448 H1TF2 TRANSFAC yes 67872703
chr5 172881444 172881448 NFE TRANSFAC yes 67872704
chr5 172881444 172881448 SRF TRANSFAC yes 67872705
chr5 172881444 172881448 H1TF2 TRANSFAC yes 70765709
chr5 172881444 172881448 NFE TRANSFAC yes 70765710
chr5 172881444 172881448 SRF TRANSFAC yes 70765711
chr5 172881444 172881450 NFYC TRANSFAC yes 67872706
chr5 172881444 172881450 NFYC TRANSFAC yes 70765712
chr5 172881447 172881460 ATF4 JASPAR yes 67872707
chr5 172881447 172881460 ATF4 JASPAR yes 70765713
chr5 172881495 172881499 YY1 TRANSFAC yes 67872708
chr5 172881495 172881499 YY1 TRANSFAC yes 70765714
chr5 172881528 172881545 RXRA JASPAR yes 67872709
chr5 172881528 172881545 RXRA JASPAR yes 70765715
chr5 172881535 172881548 NR2F1 JASPAR yes 67872710
chr5 172881535 172881548 NR2F1 JASPAR yes 70765716
chr5 172881537 172881548 ESRRA JASPAR yes 67872711
chr5 172881537 172881548 ESRRB JASPAR yes 67872712
chr5 172881537 172881548 ESRRA JASPAR yes 70765717
chr5 172881537 172881548 ESRRB JASPAR yes 70765718
chr5 172881538 172881546 NR4A2 JASPAR yes 67872713
chr5 172881538 172881546 NR4A2 JASPAR yes 70765719
chr5 172881538 172881556 ESR1 JASPAR yes 67872714
chr5 172881538 172881556 ESR1 JASPAR yes 70765720
chr5 172881539 172881549 RORA JASPAR yes 67872715
chr5 172881539 172881549 RORA JASPAR yes 70765721
chr5 172881542 172881556 JUN JASPAR yes 67872716
chr5 172881542 172881556 JUN JASPAR yes 70765722
chr5 172881545 172881556 FOSL2 JASPAR yes 67872717
chr5 172881545 172881556 JUNB JASPAR yes 67872718
chr5 172881545 172881556 FOSL2 JASPAR yes 70765723
chr5 172881545 172881556 JUNB JASPAR yes 70765724
chr5 172881546 172881557 FOS JASPAR yes 67872719
chr5 172881546 172881557 FOSL1 JASPAR yes 67872720
chr5 172881546 172881557 JUND JASPAR yes 67872721
chr5 172881546 172881557 NFE2 JASPAR yes 67872722
chr5 172881546 172881557 FOS JASPAR yes 70765725
chr5 172881546 172881557 FOSL1 JASPAR yes 70765726
chr5 172881546 172881557 JUND JASPAR yes 70765727
chr5 172881546 172881557 NFE2 JASPAR yes 70765728
chr5 172881547 172881554 JUN TRANSFAC yes 67872723
chr5 172881547 172881554 JUN TRANSFAC yes 70765729
chr5 172881547 172881556 JDP2 JASPAR yes 67872724
chr5 172881547 172881556 JDP2 JASPAR yes 70765730
chr5 172881547 172881558 FOSL2 JASPAR yes 67872725
chr5 172881547 172881558 JUNB JASPAR yes 67872726
chr5 172881547 172881558 FOSL2 JASPAR yes 70765731
chr5 172881547 172881558 JUNB JASPAR yes 70765732
chr5 172881547 172881561 JUN JASPAR yes 67872727
chr5 172881547 172881561 JUN JASPAR yes 70765733
chr5 172881548 172881559 BATF JASPAR yes 67872728
chr5 172881548 172881559 BATF JASPAR yes 70765734
chr5 172881553 172881557 YY1 TRANSFAC yes 67872729
chr5 172881553 172881557 YY1 TRANSFAC yes 70765735
chr5 172881559 172881562 MYB TRANSFAC yes 67872730
chr5 172881559 172881562 MYB TRANSFAC yes 70765736
chr5 172881563 172881574 PROP1 JASPAR yes 67872731
chr5 172881563 172881574 PROP1 JASPAR yes 70765737
chr5 172881570 172881585 PRDM1 JASPAR yes 67872732
chr5 172881570 172881585 PRDM1 JASPAR yes 70765738
chr5 172881577 172881594 ZNF410 JASPAR yes 67872733
chr5 172881577 172881594 ZNF410 JASPAR yes 70765739
chr5 172881610 172881614 TEAD2 TRANSFAC yes 67872734
chr5 172881610 172881614 TEAD2 TRANSFAC yes 70765740
chr5 172881610 172881615 TBP TRANSFAC yes 67872735
chr5 172881610 172881615 TBP TRANSFAC yes 70765741
chr5 172881610 172881616 TFIID TRANSFAC yes 67872736
chr5 172881610 172881616 TFIID TRANSFAC yes 70765742
chr5 172881624 172881635 FLI1 JASPAR yes 67872737
chr5 172881624 172881635 FLI1 JASPAR yes 70765743
chr5 172881625 172881636 ELF5 JASPAR yes 67872738
chr5 172881625 172881636 ELF5 JASPAR yes 70765744
chr5 172881625 172881638 ELF1 JASPAR yes 67872739
chr5 172881625 172881638 ELF1 JASPAR yes 70765745
chr5 172881631 172881646 PRDM1 JASPAR yes 67872740
chr5 172881631 172881646 PRDM1 JASPAR yes 70765746
chr5 172881644 172881648 NFE TRANSFAC yes 67872741
chr5 172881644 172881648 NFE TRANSFAC yes 70765747
chr5 172881644 172881649 GATA1 TRANSFAC yes 67872742
chr5 172881644 172881649 GATA1 TRANSFAC yes 70765748
chr5 172881644 172881650 GATA3 JASPAR yes 67872743
chr5 172881644 172881650 GATA3 JASPAR yes 70765749
SNP sites on vista50213[chr5:172881373-172881649]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 172881471 rs533418034 C T
POLR2A
8709624
chr5 172881525 rs115556980 C T
POLR2A
8709625
chr5 172881549 rs145522520 T C
BATF ESR1 FOS FOSL1 FOSL2 JDP2 JUN JUNB JUND NFE2 POLR2A RORA
8709626
Genes possibly regulated by vista50213[chr5:172881373-172881649]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista50213[chr5:172881373-172881649]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results