EnhancerDB
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  3. vista50223[chr5:173119808-173120151]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50223[chr5:173119808-173120151]
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Tissue distribution of vista50223
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Transcription factor that possibly regulate vista50223[chr5:173119808-173120151]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 173119816 173119822 LEF1 TRANSFAC yes 67893529
chr5 173119816 173119822 SOX10 JASPAR yes 67893530
chr5 173119816 173119822 LEF1 TRANSFAC yes 70766157
chr5 173119816 173119822 SOX10 JASPAR yes 70766158
chr5 173119816 173119831 FOXP1 JASPAR yes 67893531
chr5 173119816 173119831 FOXP1 JASPAR yes 70766159
chr5 173119873 173119878 TFAP2A TRANSFAC yes 67893532
chr5 173119873 173119878 TFAP2A TRANSFAC yes 70766160
chr5 173119873 173119879 MZF1 JASPAR yes 67893533
chr5 173119873 173119879 MZF1 JASPAR yes 70766161
chr5 173119876 173119881 GATA2 JASPAR yes 67893534
chr5 173119876 173119881 GATA2 JASPAR yes 70766162
chr5 173119879 173119882 MYB TRANSFAC yes 67893535
chr5 173119879 173119882 MYB TRANSFAC yes 70766163
chr5 173119913 173119928 JUND JASPAR yes 67893536
chr5 173119913 173119928 JUND JASPAR yes 70766164
chr5 173119939 173119953 ZIC1 JASPAR yes 67893537
chr5 173119939 173119953 ZIC1 JASPAR yes 70766165
chr5 173119988 173120003 SOX21 JASPAR yes 67893538
chr5 173119988 173120003 SOX21 JASPAR yes 70766166
chr5 173119998 173120011 JUN JASPAR yes 67893539
chr5 173119998 173120011 JUN JASPAR yes 70766167
chr5 173120008 173120012 YY1 TRANSFAC yes 67893540
chr5 173120008 173120012 YY1 TRANSFAC yes 70766168
chr5 173120032 173120044 POU3F1 JASPAR yes 67893541
chr5 173120032 173120044 POU3F2 JASPAR yes 67893542
chr5 173120032 173120044 POU3F1 JASPAR yes 70766169
chr5 173120032 173120044 POU3F2 JASPAR yes 70766170
chr5 173120036 173120039 MYB TRANSFAC yes 67893543
chr5 173120036 173120039 MYB TRANSFAC yes 70766171
chr5 173120039 173120043 YY1 TRANSFAC yes 67893544
chr5 173120039 173120043 YY1 TRANSFAC yes 70766172
chr5 173120040 173120050 HMBOX1 JASPAR yes 67893545
chr5 173120040 173120050 HMBOX1 JASPAR yes 70766173
chr5 173120049 173120053 YY1 TRANSFAC yes 67893546
chr5 173120049 173120053 YY1 TRANSFAC yes 70766174
chr5 173120060 173120063 MYB TRANSFAC yes 67893547
chr5 173120060 173120063 MYB TRANSFAC yes 70766175
chr5 173120071 173120076 GATA2 JASPAR yes 67893548
chr5 173120071 173120076 GATA2 JASPAR yes 70766176
chr5 173120092 173120105 ZBTB18 JASPAR yes 67893549
chr5 173120092 173120105 ZBTB18 JASPAR yes 70766177
chr5 173120092 173120107 SCRT1 JASPAR yes 67893550
chr5 173120092 173120107 SCRT1 JASPAR yes 70766178
chr5 173120097 173120107 MAX JASPAR yes 67893551
chr5 173120097 173120107 MAX JASPAR yes 70766179
chr5 173120103 173120107 H4TF2 TRANSFAC yes 67893552
chr5 173120103 173120107 H4TF2 TRANSFAC yes 70766180
chr5 173120118 173120133 PRDM1 JASPAR yes 67893553
chr5 173120118 173120133 PRDM1 JASPAR yes 70766181
chr5 173120118 173120139 ZNF263 JASPAR yes 67893554
chr5 173120118 173120139 ZNF263 JASPAR yes 70766182
chr5 173120128 173120134 NFIC JASPAR yes 67893555
chr5 173120128 173120134 NFIC JASPAR yes 70766183
chr5 173120148 173120153 GATA1 TRANSFAC yes 67893556
chr5 173120148 173120153 GATA1 TRANSFAC yes 70766184
SNP sites on vista50223[chr5:173119808-173120151]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 173119903 rs569570386 T C no 8711578
chr5 173119948 rs145681042 G A
ZIC1
8711579
Genes possibly regulated by vista50223[chr5:173119808-173120151]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 173034517 173043663 - BOD1 ENSG00000145919.6 173043663 0.65 0.99 5993 23855
Expression level of Genes
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miRNAs possibly regulated by vista50223[chr5:173119808-173120151]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results