EnhancerDB
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  3. vista50224[chr5:173125292-173125488]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50224[chr5:173125292-173125488]
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Tissue distribution of vista50224
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Transcription factor that possibly regulate vista50224[chr5:173125292-173125488]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 173125290 173125303 ATF4 JASPAR yes 67893918
chr5 173125290 173125303 ATF4 JASPAR yes 70766185
chr5 173125328 173125334 YY1 JASPAR yes 67893919
chr5 173125328 173125334 YY1 JASPAR yes 70766186
chr5 173125348 173125359 FLI1 JASPAR yes 67893920
chr5 173125348 173125359 FLI1 JASPAR yes 70766187
chr5 173125349 173125357 EHF JASPAR yes 67893921
chr5 173125349 173125357 EHF JASPAR yes 70766188
chr5 173125360 173125365 SP1 TRANSFAC yes 67893922
chr5 173125360 173125365 SP1 TRANSFAC yes 70766189
chr5 173125367 173125381 STAT1 JASPAR yes 67893923
chr5 173125367 173125381 STAT1 JASPAR yes 70766190
chr5 173125368 173125378 NFATC3 JASPAR yes 67893924
chr5 173125368 173125378 NFATC3 JASPAR yes 70766191
chr5 173125387 173125399 PKNOX1 JASPAR yes 67893925
chr5 173125387 173125399 PKNOX2 JASPAR yes 67893926
chr5 173125387 173125399 TGIF2 JASPAR yes 67893927
chr5 173125387 173125399 PKNOX1 JASPAR yes 70766192
chr5 173125387 173125399 PKNOX2 JASPAR yes 70766193
chr5 173125387 173125399 TGIF2 JASPAR yes 70766194
chr5 173125388 173125398 HEY2 JASPAR yes 67893928
chr5 173125388 173125398 ID4 JASPAR yes 67893929
chr5 173125388 173125398 TCF4 JASPAR yes 67893930
chr5 173125388 173125398 HEY2 JASPAR yes 70766195
chr5 173125388 173125398 ID4 JASPAR yes 70766196
chr5 173125388 173125398 TCF4 JASPAR yes 70766197
chr5 173125389 173125398 SNAI2 JASPAR yes 67893931
chr5 173125389 173125398 SNAI2 JASPAR yes 70766198
chr5 173125390 173125395 USF2 TRANSFAC yes 67893932
chr5 173125390 173125395 USF2 TRANSFAC yes 70766199
chr5 173125393 173125397 NFE TRANSFAC yes 67893933
chr5 173125393 173125397 NFE TRANSFAC yes 70766200
chr5 173125402 173125417 ZBTB33 JASPAR yes 67893934
chr5 173125402 173125417 ZBTB33 JASPAR yes 70766201
chr5 173125416 173125427 ELK4 JASPAR yes 67893935
chr5 173125416 173125427 FLI1 JASPAR yes 67893936
chr5 173125416 173125427 ELK4 JASPAR yes 70766202
chr5 173125416 173125427 FLI1 JASPAR yes 70766203
chr5 173125417 173125427 ETV6 JASPAR yes 67893937
chr5 173125417 173125427 GABPA JASPAR yes 67893938
chr5 173125417 173125427 ETV6 JASPAR yes 70766204
chr5 173125417 173125427 GABPA JASPAR yes 70766205
chr5 173125417 173125428 ELF5 JASPAR yes 67893939
chr5 173125417 173125428 ELF5 JASPAR yes 70766206
chr5 173125417 173125429 ELF1 JASPAR yes 67893940
chr5 173125417 173125429 ELF4 JASPAR yes 67893941
chr5 173125417 173125429 ELF1 JASPAR yes 70766207
chr5 173125417 173125429 ELF4 JASPAR yes 70766208
chr5 173125417 173125430 ELF1 JASPAR yes 67893942
chr5 173125417 173125430 ELF1 JASPAR yes 70766209
chr5 173125418 173125425 SPI1 JASPAR yes 67893943
chr5 173125418 173125425 SPI1 JASPAR yes 70766210
chr5 173125418 173125426 EHF JASPAR yes 67893944
chr5 173125418 173125426 FEV JASPAR yes 67893945
chr5 173125418 173125426 EHF JASPAR yes 70766211
chr5 173125418 173125426 FEV JASPAR yes 70766212
chr5 173125420 173125439 REST JASPAR yes 67893946
chr5 173125420 173125439 REST JASPAR yes 70766213
chr5 173125426 173125445 RFX2 JASPAR yes 67893947
chr5 173125426 173125445 RFX2 JASPAR yes 70766214
chr5 173125430 173125446 RFX2 JASPAR yes 67893948
chr5 173125430 173125446 RFX3 JASPAR yes 67893949
chr5 173125430 173125446 RFX4 JASPAR yes 67893950
chr5 173125430 173125446 RFX5 JASPAR yes 67893951
chr5 173125430 173125446 RFX2 JASPAR yes 70766215
chr5 173125430 173125446 RFX3 JASPAR yes 70766216
chr5 173125430 173125446 RFX4 JASPAR yes 70766217
chr5 173125430 173125446 RFX5 JASPAR yes 70766218
chr5 173125434 173125446 POU2F1 JASPAR yes 67893952
chr5 173125434 173125446 POU2F1 JASPAR yes 70766219
chr5 173125435 173125447 POU3F2 JASPAR yes 67893953
chr5 173125435 173125447 POU3F2 JASPAR yes 70766220
chr5 173125436 173125445 POU3F4 JASPAR yes 67893954
chr5 173125436 173125445 POU5F1B JASPAR yes 67893955
chr5 173125436 173125445 POU3F4 JASPAR yes 70766221
chr5 173125436 173125445 POU5F1B JASPAR yes 70766222
chr5 173125436 173125446 NFATC3 JASPAR yes 67893956
chr5 173125436 173125446 NFATC3 JASPAR yes 70766223
chr5 173125438 173125448 RELA JASPAR yes 67893957
chr5 173125438 173125448 REL JASPAR yes 67893958
chr5 173125438 173125448 RELA JASPAR yes 70766224
chr5 173125438 173125448 REL JASPAR yes 70766225
chr5 173125438 173125449 NFKB1 JASPAR yes 67893959
chr5 173125438 173125449 NFKB1 JASPAR yes 70766226
chr5 173125439 173125449 RELA JASPAR yes 67893960
chr5 173125439 173125449 REL JASPAR yes 67893961
chr5 173125439 173125449 RELA JASPAR yes 70766227
chr5 173125439 173125449 REL JASPAR yes 70766228
chr5 173125440 173125450 TEAD4 JASPAR yes 67893962
chr5 173125440 173125450 TEAD4 JASPAR yes 70766229
chr5 173125462 173125471 ZEB1 JASPAR yes 67893963
chr5 173125462 173125471 ZEB1 JASPAR yes 70766230
chr5 173125462 173125477 SCRT1 JASPAR yes 67893964
chr5 173125462 173125477 SCRT1 JASPAR yes 70766231
chr5 173125465 173125470 USF2 TRANSFAC yes 67893965
chr5 173125465 173125470 USF2 TRANSFAC yes 70766232
chr5 173125476 173125491 PRDM1 JASPAR yes 67893966
chr5 173125476 173125491 PRDM1 JASPAR yes 70766233
SNP sites on vista50224[chr5:173125292-173125488]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 173125293 rs7714271 T C
ATF4
8711622
chr5 173125294 rs140568456 T C
ATF4
8711623
chr5 173125405 rs147108231 C T
ZBTB33
8711624
chr5 173125409 rs138593986 C T
ZBTB33
8711625
Genes possibly regulated by vista50224[chr5:173125292-173125488]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 173034517 173043663 - BOD1 ENSG00000145919.6 173043663 0.65 0.99 5993 18371
Expression level of Genes
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miRNAs possibly regulated by vista50224[chr5:173125292-173125488]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results