EnhancerDB
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  3. vista50228[chr5:173180419-173180632]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50228[chr5:173180419-173180632]
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Tissue distribution of vista50228
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Transcription factor that possibly regulate vista50228[chr5:173180419-173180632]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 173179835 173180496 GATA1 UCSC Txn Factor no Conserved 108537581
chr5 173180363 173181019 E2F1 UCSC Txn Factor no Conserved 108537582
chr5 173180386 173180739 CEBPB UCSC Txn Factor no Conserved 108537583
chr5 173180424 173180781 TFAP2C UCSC Txn Factor no Conserved 108537584
chr5 173180440 173180742 TFAP2A UCSC Txn Factor no Conserved 108537585
chr5 173180447 173180457 RORA JASPAR yes 67900519
chr5 173180447 173180457 RORA JASPAR yes 70766563
chr5 173180448 173180459 ESRRA JASPAR yes 67900520
chr5 173180448 173180459 ESRRA JASPAR yes 70766564
chr5 173180451 173180468 RXRA JASPAR yes 67900521
chr5 173180451 173180468 RXRA JASPAR yes 70766565
chr5 173180452 173180456 ESR1 TRANSFAC yes 67900522
chr5 173180452 173180456 ESR1 TRANSFAC yes 70766566
chr5 173180483 173180486 MYB TRANSFAC yes 67900523
chr5 173180483 173180486 MYB TRANSFAC yes 70766567
chr5 173180523 173180526 MYB TRANSFAC yes 67900524
chr5 173180523 173180526 MYB TRANSFAC yes 70766568
chr5 173180523 173180533 TFCP2 JASPAR yes 67900525
chr5 173180523 173180533 TFCP2 JASPAR yes 70766569
chr5 173180524 173180535 SPDEF JASPAR yes 67900526
chr5 173180524 173180535 SPDEF JASPAR yes 70766570
chr5 173180525 173180534 ELK4 JASPAR yes 67900527
chr5 173180525 173180534 ELK4 JASPAR yes 70766571
chr5 173180525 173180535 ERF JASPAR yes 67900528
chr5 173180525 173180535 ETV3 JASPAR yes 67900529
chr5 173180525 173180535 ERF JASPAR yes 70766572
chr5 173180525 173180535 ETV3 JASPAR yes 70766573
chr5 173180598 173180605 NFATC2 JASPAR yes 67900530
chr5 173180598 173180605 NFATC2 JASPAR yes 70766574
chr5 173180599 173180607 FOXO3 JASPAR yes 67900531
chr5 173180599 173180607 FOXO3 JASPAR yes 70766575
chr5 173180603 173180618 TFAP2A JASPAR yes 67900532
chr5 173180603 173180618 TFAP2A JASPAR yes 70766576
chr5 173180605 173180620 TFAP2C JASPAR yes 67900533
chr5 173180605 173180620 TFAP2C JASPAR yes 70766577
chr5 173180606 173180617 TFAP2A JASPAR yes 67900534
chr5 173180606 173180617 TFAP2B JASPAR yes 67900535
chr5 173180606 173180617 TFAP2C JASPAR yes 67900536
chr5 173180606 173180617 TFAP2A JASPAR yes 70766578
chr5 173180606 173180617 TFAP2B JASPAR yes 70766579
chr5 173180606 173180617 TFAP2C JASPAR yes 70766580
chr5 173180607 173180616 TFAP2A JASPAR yes 67900537
chr5 173180607 173180616 TFAP2A JASPAR yes 70766581
chr5 173180621 173180626 NFY TRANSFAC yes 67900538
chr5 173180621 173180626 NFY TRANSFAC yes 70766582
SNP sites on vista50228[chr5:173180419-173180632]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 173180516 rs543406342 C T
CEBPB E2F1 TFAP2A TFAP2C
8712469
chr5 173180517 rs567601063 G A
CEBPB E2F1 TFAP2A TFAP2C
8712470
chr5 173180523 rs563167915 G A
CEBPB E2F1 MYB TFAP2A TFAP2C TFCP2
8712471
Genes possibly regulated by vista50228[chr5:173180419-173180632]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista50228[chr5:173180419-173180632]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results