EnhancerDB
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  3. vista50231[chr5:173193377-173193650]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50231[chr5:173193377-173193650]
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Tissue distribution of vista50231
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Transcription factor that possibly regulate vista50231[chr5:173193377-173193650]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 173193239 173193880 TCF7L2 UCSC Txn Factor no Conserved 108537593
chr5 173193305 173193775 GATA3 UCSC Txn Factor no Conserved 108537594
chr5 173193325 173193754 NR3C1 UCSC Txn Factor no Conserved 108537595
chr5 173193330 173193852 EP300 UCSC Txn Factor no Conserved 108537596
chr5 173193361 173193827 TCF12 UCSC Txn Factor no Conserved 108537597
chr5 173193377 173193704 GATA2 UCSC Txn Factor no Conserved 108537598
chr5 173193406 173193686 CREB1 UCSC Txn Factor no Conserved 108537599
chr5 173193412 173193796 TEAD4 UCSC Txn Factor no Conserved 108537600
chr5 173193432 173193764 JUND UCSC Txn Factor no Conserved 108537601
chr5 173193457 173193713 ATF1 UCSC Txn Factor no Conserved 108537602
chr5 173193480 173193804 CEBPB UCSC Txn Factor no Conserved 108537603
chr5 173193509 173193885 TBP UCSC Txn Factor no Conserved 108537604
chr5 173193365 173193380 AR JASPAR yes 67902269
chr5 173193365 173193380 AR JASPAR yes 70766656
chr5 173193377 173193397 RREB1 JASPAR yes 67902270
chr5 173193377 173193397 RREB1 JASPAR yes 70766657
chr5 173193379 173193399 RREB1 JASPAR yes 67902271
chr5 173193379 173193399 RREB1 JASPAR yes 70766658
chr5 173193385 173193405 RREB1 JASPAR yes 67902272
chr5 173193385 173193405 RREB1 JASPAR yes 70766659
chr5 173193411 173193421 GCM2 JASPAR yes 67902273
chr5 173193411 173193421 GCM2 JASPAR yes 70766660
chr5 173193429 173193444 RUNX2 JASPAR yes 67902274
chr5 173193429 173193444 RUNX2 JASPAR yes 70766661
chr5 173193446 173193460 STAT1 JASPAR yes 67902275
chr5 173193446 173193460 STAT1 JASPAR yes 70766662
chr5 173193458 173193462 NFE TRANSFAC yes 67902276
chr5 173193458 173193462 NFE TRANSFAC yes 70766663
chr5 173193499 173193513 TCF7L2 JASPAR yes 67902277
chr5 173193499 173193513 TCF7L2 JASPAR yes 70766664
chr5 173193499 173193514 LEF1 JASPAR yes 67902278
chr5 173193499 173193514 LEF1 JASPAR yes 70766665
chr5 173193504 173193510 SOX10 JASPAR yes 67902279
chr5 173193504 173193510 SOX10 JASPAR yes 70766666
chr5 173193520 173193525 ATF1 TRANSFAC yes 67902280
chr5 173193520 173193525 ATF1 TRANSFAC yes 70766667
chr5 173193532 173193546 GATA2 JASPAR yes 67902281
chr5 173193532 173193546 GATA2 JASPAR yes 70766668
chr5 173193536 173193544 GATA3 JASPAR yes 67902282
chr5 173193536 173193544 GATA3 JASPAR yes 70766669
chr5 173193552 173193558 YY1 JASPAR yes 67902283
chr5 173193552 173193558 YY1 JASPAR yes 70766670
chr5 173193558 173193562 NFE TRANSFAC yes 67902284
chr5 173193558 173193562 NFE TRANSFAC yes 70766671
chr5 173193563 173193570 SPIB JASPAR yes 67902285
chr5 173193563 173193570 SPIB JASPAR yes 70766672
chr5 173193563 173193573 ETV6 JASPAR yes 67902286
chr5 173193563 173193573 ETV6 JASPAR yes 70766673
chr5 173193563 173193574 FLI1 JASPAR yes 67902287
chr5 173193563 173193574 FLI1 JASPAR yes 70766674
chr5 173193564 173193572 FEV JASPAR yes 67902288
chr5 173193564 173193572 FEV JASPAR yes 70766675
chr5 173193579 173193589 NFIA JASPAR yes 67902289
chr5 173193579 173193589 NFIA JASPAR yes 70766676
chr5 173193580 173193589 NFIX JASPAR yes 67902290
chr5 173193580 173193589 NFIX JASPAR yes 70766677
chr5 173193581 173193587 NFIC JASPAR yes 67902291
chr5 173193581 173193587 NFIC JASPAR yes 70766678
chr5 173193596 173193608 SRF JASPAR yes 67902292
chr5 173193596 173193608 SRF JASPAR yes 70766679
chr5 173193596 173193611 JUND JASPAR yes 67902293
chr5 173193596 173193611 JUND JASPAR yes 70766680
chr5 173193597 173193610 JUN JASPAR yes 67902294
chr5 173193597 173193610 JUN JASPAR yes 70766681
chr5 173193598 173193612 ATF7 JASPAR yes 67902295
chr5 173193598 173193612 BATF3 JASPAR yes 67902296
chr5 173193598 173193612 ATF7 JASPAR yes 70766682
chr5 173193598 173193612 BATF3 JASPAR yes 70766683
chr5 173193599 173193611 JDP2 JASPAR yes 67902297
chr5 173193599 173193611 JDP2 JASPAR yes 70766684
chr5 173193599 173193614 JUND JASPAR yes 67902298
chr5 173193599 173193614 JUND JASPAR yes 70766685
chr5 173193608 173193628 TP63 JASPAR yes 67902299
chr5 173193608 173193628 TP63 JASPAR yes 70766686
chr5 173193625 173193635 TEAD1 JASPAR yes 67902300
chr5 173193625 173193635 TEAD4 JASPAR yes 67902301
chr5 173193625 173193635 TEAD1 JASPAR yes 70766687
chr5 173193625 173193635 TEAD4 JASPAR yes 70766688
chr5 173193625 173193637 TEAD1 JASPAR yes 67902302
chr5 173193625 173193637 TEAD1 JASPAR yes 70766689
chr5 173193626 173193634 TEAD3 JASPAR yes 67902303
chr5 173193626 173193634 TEAD3 JASPAR yes 70766690
chr5 173193630 173193651 REST JASPAR yes 67902304
chr5 173193630 173193651 REST JASPAR yes 70766691
chr5 173193644 173193648 YY1 TRANSFAC yes 67902305
chr5 173193644 173193648 YY1 TRANSFAC yes 70766692
SNP sites on vista50231[chr5:173193377-173193650]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 173193433 rs791349 G C,T
CREB1 EP300 GATA2 GATA3 JUND NR3C1 RUNX2 TCF12 TCF7L2 TEAD4
8712676
chr5 173193471 rs182014977 G A
ATF1 CREB1 EP300 GATA2 GATA3 JUND NR3C1 TCF12 TCF7L2 TEAD4
8712677
chr5 173193484 rs150333044 T G
ATF1 CEBPB CREB1 EP300 GATA2 GATA3 JUND NR3C1 TCF12 TCF7L2 TEAD4
8712678
chr5 173193551 rs138020253 C T
ATF1 CEBPB CREB1 EP300 GATA2 GATA3 JUND NR3C1 TBP TCF12 TCF7L2 TEAD4
8712679
Genes possibly regulated by vista50231[chr5:173193377-173193650]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista50231[chr5:173193377-173193650]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results