EnhancerDB
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  3. vista50238[chr5:173252274-173252478]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50238[chr5:173252274-173252478]
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Tissue distribution of vista50238
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Transcription factor that possibly regulate vista50238[chr5:173252274-173252478]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 173252164 173252852 GATA3 UCSC Txn Factor no Conserved 108537619
chr5 173252168 173252718 GATA2 UCSC Txn Factor no Conserved 108537620
chr5 173252283 173252288 SP1 TRANSFAC yes 67910979
chr5 173252283 173252288 SP1 TRANSFAC yes 70767094
chr5 173252325 173252339 TLX1 JASPAR yes 67910980
chr5 173252325 173252339 TLX1 JASPAR yes 70767095
chr5 173252333 173252342 THAP1 JASPAR yes 67910981
chr5 173252333 173252342 THAP1 JASPAR yes 70767096
chr5 173252333 173252344 GCM1 JASPAR yes 67910982
chr5 173252333 173252344 GCM1 JASPAR yes 70767097
chr5 173252340 173252355 SCRT1 JASPAR yes 67910983
chr5 173252340 173252355 SCRT1 JASPAR yes 70767098
chr5 173252341 173252347 ZNF354C JASPAR yes 67910984
chr5 173252341 173252347 ZNF354C JASPAR yes 70767099
chr5 173252359 173252378 PAX5 JASPAR yes 67910985
chr5 173252359 173252378 PAX5 JASPAR yes 70767100
chr5 173252363 173252379 NFYA JASPAR yes 67910986
chr5 173252363 173252379 NFYA JASPAR yes 70767101
chr5 173252366 173252381 NFYB JASPAR yes 67910987
chr5 173252366 173252381 NFYB JASPAR yes 70767102
chr5 173252368 173252373 NFY TRANSFAC yes 67910988
chr5 173252368 173252373 NFY TRANSFAC yes 70767103
chr5 173252380 173252386 NFE2 TRANSFAC yes 67910989
chr5 173252380 173252386 NFE2 TRANSFAC yes 70767104
chr5 173252393 173252400 JUN TRANSFAC yes 67910990
chr5 173252393 173252400 JUN TRANSFAC yes 70767105
chr5 173252427 173252441 GATA2 JASPAR yes 67910991
chr5 173252427 173252441 GATA2 JASPAR yes 70767106
chr5 173252429 173252437 GATA3 JASPAR yes 67910992
chr5 173252429 173252437 GATA3 JASPAR yes 70767107
chr5 173252435 173252441 GATA3 JASPAR yes 67910993
chr5 173252435 173252441 GATA3 JASPAR yes 70767108
chr5 173252454 173252469 AR JASPAR yes 67910994
chr5 173252454 173252469 AR JASPAR yes 70767109
chr5 173252463 173252478 NR2C2 JASPAR yes 67910995
chr5 173252463 173252478 NR2C2 JASPAR yes 70767110
chr5 173252469 173252475 NFE2 TRANSFAC yes 67910996
chr5 173252469 173252475 NFE2 TRANSFAC yes 70767111
chr5 173252471 173252485 GLIS2 JASPAR yes 67910997
chr5 173252471 173252485 GLIS2 JASPAR yes 70767112
chr5 173252471 173252492 ZNF263 JASPAR yes 67910998
chr5 173252471 173252492 ZNF263 JASPAR yes 70767113
chr5 173252472 173252492 RREB1 JASPAR yes 67910999
chr5 173252472 173252492 RREB1 JASPAR yes 70767114
chr5 173252474 173252495 ZNF263 JASPAR yes 67911000
chr5 173252474 173252495 ZNF263 JASPAR yes 70767115
SNP sites on vista50238[chr5:173252274-173252478]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 173252306 rs2973895 C G
GATA2 GATA3
8713608
Genes possibly regulated by vista50238[chr5:173252274-173252478]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 173315283 173388979 + CPEB4 ENSG00000113742.8 173315283 0.72 0.97 5994 37195
Expression level of Genes
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miRNAs possibly regulated by vista50238[chr5:173252274-173252478]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results