EnhancerDB
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  3. vista5024[chr1:212854473-212854873]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5024[chr1:212854473-212854873]
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Tissue distribution of vista5024
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Transcription factor that possibly regulate vista5024[chr1:212854473-212854873]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 212854482 212854494 IRF1 JASPAR yes 35146912
chr1 212854482 212854494 IRF1 JASPAR yes 118455029
chr1 212854482 212854496 IRF7 JASPAR yes 35146913
chr1 212854482 212854496 IRF7 JASPAR yes 118455030
chr1 212854485 212854500 LEF1 JASPAR yes 35146914
chr1 212854485 212854500 LEF1 JASPAR yes 118455031
chr1 212854526 212854544 MAFF JASPAR yes 35146915
chr1 212854526 212854544 MAFF JASPAR yes 118455032
chr1 212854528 212854543 MAFK JASPAR yes 35146916
chr1 212854528 212854543 MAFK JASPAR yes 118455033
chr1 212854529 212854535 TCF4 TRANSFAC yes 35146917
chr1 212854529 212854535 TCF4 TRANSFAC yes 118455034
chr1 212854532 212854548 ZNF143 JASPAR yes 35146918
chr1 212854532 212854548 ZNF143 JASPAR yes 118455035
chr1 212854535 212854552 BCL6B JASPAR yes 35146919
chr1 212854535 212854552 BCL6B JASPAR yes 118455036
chr1 212854536 212854546 HOXB13 JASPAR yes 35146920
chr1 212854536 212854546 HOXD13 JASPAR yes 35146921
chr1 212854536 212854546 HOXB13 JASPAR yes 118455037
chr1 212854536 212854546 HOXD13 JASPAR yes 118455038
chr1 212854536 212854551 STAT1 JASPAR yes 35146922
chr1 212854536 212854551 STAT1 JASPAR yes 118455039
chr1 212854538 212854549 STAT1 JASPAR yes 35146923
chr1 212854538 212854549 STAT1 JASPAR yes 118455040
chr1 212854542 212854553 NFKB1 JASPAR yes 35146924
chr1 212854542 212854553 NFKB1 JASPAR yes 118455041
chr1 212854543 212854553 RELA JASPAR yes 35146925
chr1 212854543 212854553 RELA JASPAR yes 118455042
chr1 212854553 212854557 YY1 TRANSFAC yes 35146926
chr1 212854553 212854557 YY1 TRANSFAC yes 118455043
chr1 212854562 212854577 ESR2 JASPAR yes 35146927
chr1 212854562 212854577 ESR2 JASPAR yes 118455044
chr1 212854570 212854584 RORA JASPAR yes 35146928
chr1 212854570 212854584 RORA JASPAR yes 118455045
chr1 212854571 212854581 RORA JASPAR yes 35146929
chr1 212854571 212854581 RORA JASPAR yes 118455046
chr1 212854599 212854613 RORA JASPAR yes 35146930
chr1 212854599 212854613 RORA JASPAR yes 118455047
chr1 212854607 212854628 REST JASPAR yes 35146931
chr1 212854607 212854628 REST JASPAR yes 118455048
chr1 212854616 212854634 SRF JASPAR yes 35146932
chr1 212854616 212854634 SRF JASPAR yes 118455049
chr1 212854624 212854638 SPIC JASPAR yes 35146933
chr1 212854624 212854638 SPIC JASPAR yes 118455050
chr1 212854628 212854633 TFAP2A TRANSFAC yes 35146934
chr1 212854628 212854633 TFAP2A TRANSFAC yes 118455051
chr1 212854628 212854634 MZF1 JASPAR yes 35146935
chr1 212854628 212854634 MZF1 JASPAR yes 118455052
chr1 212854654 212854675 IRF1 JASPAR yes 35146936
chr1 212854654 212854675 IRF1 JASPAR yes 118455053
chr1 212854658 212854676 IRF2 JASPAR yes 35146937
chr1 212854658 212854676 IRF2 JASPAR yes 118455054
chr1 212854659 212854674 LEF1 JASPAR yes 35146938
chr1 212854659 212854674 LEF1 JASPAR yes 118455055
chr1 212854663 212854669 TCF4 TRANSFAC yes 35146939
chr1 212854663 212854669 TCF4 TRANSFAC yes 118455056
chr1 212854675 212854695 RREB1 JASPAR yes 35146940
chr1 212854675 212854695 RREB1 JASPAR yes 118455057
chr1 212854689 212854699 MZF1 JASPAR yes 35146941
chr1 212854689 212854699 MZF1 JASPAR yes 118455058
chr1 212854690 212854701 TBX20 JASPAR yes 35146942
chr1 212854690 212854701 TBX20 JASPAR yes 118455059
chr1 212854704 212854707 MYB TRANSFAC yes 35146943
chr1 212854704 212854707 MYB TRANSFAC yes 118455060
chr1 212854725 212854731 MAZ TRANSFAC yes 35146944
chr1 212854725 212854731 MAZ TRANSFAC yes 118455061
chr1 212854725 212854736 E2F6 JASPAR yes 35146945
chr1 212854725 212854736 E2F6 JASPAR yes 118455062
chr1 212854760 212854781 IRF1 JASPAR yes 35146946
chr1 212854760 212854781 IRF1 JASPAR yes 118455063
chr1 212854761 212854776 FOXP1 JASPAR yes 35146947
chr1 212854761 212854776 FOXP1 JASPAR yes 118455064
chr1 212854762 212854777 FOXP1 JASPAR yes 35146948
chr1 212854762 212854777 FOXP1 JASPAR yes 118455065
chr1 212854763 212854778 FOXP1 JASPAR yes 35146949
chr1 212854763 212854778 FOXP1 JASPAR yes 118455066
chr1 212854764 212854779 FOXP1 JASPAR yes 35146950
chr1 212854764 212854779 FOXP1 JASPAR yes 118455067
chr1 212854765 212854780 FOXP1 JASPAR yes 35146951
chr1 212854765 212854780 FOXP1 JASPAR yes 118455068
chr1 212854766 212854781 FOXP1 JASPAR yes 35146952
chr1 212854766 212854781 MEF2C JASPAR yes 35146953
chr1 212854766 212854781 FOXP1 JASPAR yes 118455069
chr1 212854766 212854781 MEF2C JASPAR yes 118455070
chr1 212854766 212854787 IRF1 JASPAR yes 35146954
chr1 212854766 212854787 IRF1 JASPAR yes 118455071
chr1 212854768 212854783 FOXP1 JASPAR yes 35146955
chr1 212854768 212854783 FOXP1 JASPAR yes 118455072
chr1 212854772 212854787 FOXP1 JASPAR yes 35146956
chr1 212854772 212854787 FOXP1 JASPAR yes 118455073
chr1 212854773 212854785 FOXC2 JASPAR yes 35146957
chr1 212854773 212854785 FOXC2 JASPAR yes 118455074
chr1 212854775 212854779 YY1 TRANSFAC yes 35146958
chr1 212854775 212854779 YY1 TRANSFAC yes 118455075
chr1 212854775 212854796 IRF1 JASPAR yes 35146959
chr1 212854775 212854796 IRF1 JASPAR yes 118455076
chr1 212854777 212854792 FOXP1 JASPAR yes 35146960
chr1 212854777 212854792 FOXP1 JASPAR yes 118455077
chr1 212854780 212854795 MEF2A JASPAR yes 35146961
chr1 212854780 212854795 MEF2A JASPAR yes 118455078
chr1 212854781 212854796 MEF2C JASPAR yes 35146962
chr1 212854781 212854796 MEF2C JASPAR yes 118455079
chr1 212854782 212854794 MEF2A JASPAR yes 35146963
chr1 212854782 212854794 MEF2B JASPAR yes 35146964
chr1 212854782 212854794 MEF2D JASPAR yes 35146965
chr1 212854782 212854794 MEF2A JASPAR yes 118455080
chr1 212854782 212854794 MEF2B JASPAR yes 118455081
chr1 212854782 212854794 MEF2D JASPAR yes 118455082
chr1 212854783 212854793 MEF2A JASPAR yes 35146966
chr1 212854783 212854793 MEF2A JASPAR yes 118455083
chr1 212854784 212854788 YY1 TRANSFAC yes 35146967
chr1 212854784 212854788 YY1 TRANSFAC yes 118455084
chr1 212854799 212854809 MAX JASPAR yes 35146968
chr1 212854799 212854809 MAX JASPAR yes 118455085
chr1 212854802 212854823 REST JASPAR yes 35146969
chr1 212854802 212854823 REST JASPAR yes 118455086
chr1 212854803 212854822 REST JASPAR yes 35146970
chr1 212854803 212854822 REST JASPAR yes 118455087
chr1 212854837 212854848 BATF JASPAR yes 35146971
chr1 212854837 212854848 BATF JASPAR yes 118455088
chr1 212854850 212854865 NR2C2 JASPAR yes 35146972
chr1 212854850 212854865 NR2C2 JASPAR yes 118455089
chr1 212854855 212854870 SCRT1 JASPAR yes 35146973
chr1 212854855 212854870 SCRT1 JASPAR yes 118455090
chr1 212854857 212854870 SCRT2 JASPAR yes 35146974
chr1 212854857 212854870 SCRT2 JASPAR yes 118455091
chr1 212854859 212854865 PTF TRANSFAC yes 35146975
chr1 212854859 212854865 PTF TRANSFAC yes 118455092
SNP sites on vista5024[chr1:212854473-212854873]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 212854619 rs185135505 T C
REST SRF
925145
chr1 212854632 rs144118823 G A
MZF1 SPIC SRF TFAP2A
925146
chr1 212854776 rs199625569 TA T
FOXC2 FOXP1 IRF1 MEF2C YY1
925147
chr1 212854777 rs3124164 A T
FOXC2 FOXP1 IRF1 MEF2C YY1
925148
chr1 212854785 rs200725147 TA T
FOXC2 FOXP1 IRF1 MEF2A MEF2B MEF2C MEF2D YY1
925149
chr1 212854786 rs3124165 A T
FOXP1 IRF1 MEF2A MEF2B MEF2C MEF2D YY1
925150
Genes possibly regulated by vista5024[chr1:212854473-212854873]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 212797789 212800120 + FAM71A ENSG00000162771.6 212797789 0.96 1.0 1829 43316
chr1 212859760 212873327 - BATF3 ENSG00000123685.4 212873327 0.87 1.0 1830 81546
Expression level of Genes
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miRNAs possibly regulated by vista5024[chr1:212854473-212854873]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results