EnhancerDB
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  3. vista50240[chr5:173280521-173280844]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50240[chr5:173280521-173280844]
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Tissue distribution of vista50240
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Transcription factor that possibly regulate vista50240[chr5:173280521-173280844]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 173280388 173280744 MAX UCSC Txn Factor no Conserved 108537621
chr5 173280424 173280734 BHLHE40 UCSC Txn Factor no Conserved 108537622
chr5 173280471 173280704 TAL1 UCSC Txn Factor no Conserved 108537623
chr5 173280475 173280731 TEAD4 UCSC Txn Factor no Conserved 108537624
chr5 173280475 173280764 STAT5A UCSC Txn Factor no Conserved 108537625
chr5 173280506 173280948 EP300 UCSC Txn Factor no Conserved 108537626
chr5 173280553 173280692 JUND UCSC Txn Factor no Conserved 108537627
chr5 173280529 173280538 NKX3-2 JASPAR yes 67914219
chr5 173280529 173280538 NKX3-2 JASPAR yes 70767165
chr5 173280530 173280538 ISL2 JASPAR yes 67914220
chr5 173280530 173280538 ISL2 JASPAR yes 70767166
chr5 173280559 173280569 HINFP JASPAR yes 67914221
chr5 173280559 173280569 HINFP JASPAR yes 70767167
chr5 173280560 173280571 SPDEF JASPAR yes 67914222
chr5 173280560 173280571 SPDEF JASPAR yes 70767168
chr5 173280560 173280572 EHF JASPAR yes 67914223
chr5 173280560 173280572 EHF JASPAR yes 70767169
chr5 173280578 173280590 PBX1 JASPAR yes 67914224
chr5 173280578 173280590 PBX1 JASPAR yes 70767170
chr5 173280581 173280586 NFY TRANSFAC yes 67914225
chr5 173280581 173280586 NFY TRANSFAC yes 70767171
chr5 173280582 173280594 E2F8 JASPAR yes 67914226
chr5 173280582 173280594 E2F8 JASPAR yes 70767172
chr5 173280585 173280590 SP1 TRANSFAC yes 67914227
chr5 173280585 173280590 SP1 TRANSFAC yes 70767173
chr5 173280588 173280602 JUN JASPAR yes 67914228
chr5 173280588 173280602 JUN JASPAR yes 70767174
chr5 173280599 173280615 ZNF143 JASPAR yes 67914229
chr5 173280599 173280615 ZNF143 JASPAR yes 70767175
chr5 173280632 173280636 YY1 TRANSFAC yes 67914230
chr5 173280632 173280636 YY1 TRANSFAC yes 70767176
chr5 173280632 173280647 STAT1 JASPAR yes 67914231
chr5 173280632 173280647 STAT1 JASPAR yes 70767177
chr5 173280634 173280645 STAT1 JASPAR yes 67914232
chr5 173280634 173280645 STAT3 JASPAR yes 67914233
chr5 173280634 173280645 STAT1 JASPAR yes 70767178
chr5 173280634 173280645 STAT3 JASPAR yes 70767179
chr5 173280641 173280656 FOXA1 JASPAR yes 67914234
chr5 173280641 173280656 FOXA1 JASPAR yes 70767180
chr5 173280645 173280656 FOXA1 JASPAR yes 67914235
chr5 173280645 173280656 FOXA1 JASPAR yes 70767181
chr5 173280666 173280678 YY1 JASPAR yes 67914236
chr5 173280666 173280678 YY1 JASPAR yes 70767182
chr5 173280679 173280683 YY1 TRANSFAC yes 67914237
chr5 173280679 173280683 YY1 TRANSFAC yes 70767183
chr5 173280681 173280690 THAP1 JASPAR yes 67914238
chr5 173280681 173280690 THAP1 JASPAR yes 70767184
chr5 173280684 173280688 LFA1 TRANSFAC yes 67914239
chr5 173280684 173280688 LFA1 TRANSFAC yes 70767185
chr5 173280685 173280694 SNAI2 JASPAR yes 67914240
chr5 173280685 173280694 SNAI2 JASPAR yes 70767186
chr5 173280685 173280695 TCF4 JASPAR yes 67914241
chr5 173280685 173280695 TCF4 JASPAR yes 70767187
chr5 173280687 173280696 ZEB1 JASPAR yes 67914242
chr5 173280687 173280696 ZEB1 JASPAR yes 70767188
chr5 173280689 173280694 SP1 TRANSFAC yes 67914243
chr5 173280689 173280694 SP1 TRANSFAC yes 70767189
chr5 173280706 173280723 RARA JASPAR yes 67914244
chr5 173280706 173280723 RXRA JASPAR yes 67914245
chr5 173280706 173280723 RARA JASPAR yes 70767190
chr5 173280706 173280723 RXRA JASPAR yes 70767191
chr5 173280713 173280719 SOX10 JASPAR yes 67914246
chr5 173280713 173280719 SOX10 JASPAR yes 70767192
chr5 173280717 173280732 MEF2A JASPAR yes 67914247
chr5 173280717 173280732 MEF2A JASPAR yes 70767193
chr5 173280718 173280733 MEF2C JASPAR yes 67914248
chr5 173280718 173280733 MEF2C JASPAR yes 70767194
chr5 173280719 173280731 MEF2A JASPAR yes 67914249
chr5 173280719 173280731 MEF2B JASPAR yes 67914250
chr5 173280719 173280731 MEF2D JASPAR yes 67914251
chr5 173280719 173280731 MEF2A JASPAR yes 70767195
chr5 173280719 173280731 MEF2B JASPAR yes 70767196
chr5 173280719 173280731 MEF2D JASPAR yes 70767197
chr5 173280720 173280730 MEF2A JASPAR yes 67914252
chr5 173280720 173280730 MEF2A JASPAR yes 70767198
chr5 173280720 173280734 GATA2 JASPAR yes 67914253
chr5 173280720 173280734 GATA2 JASPAR yes 70767199
chr5 173280721 173280725 YY1 TRANSFAC yes 67914254
chr5 173280721 173280725 YY1 TRANSFAC yes 70767200
chr5 173280724 173280732 GATA3 JASPAR yes 67914255
chr5 173280724 173280732 GATA3 JASPAR yes 70767201
chr5 173280738 173280746 FOXO3 JASPAR yes 67914256
chr5 173280738 173280746 FOXO3 JASPAR yes 70767202
chr5 173280739 173280749 NFATC3 JASPAR yes 67914257
chr5 173280739 173280749 NFATC3 JASPAR yes 70767203
chr5 173280740 173280747 NFATC2 JASPAR yes 67914258
chr5 173280740 173280747 NFATC2 JASPAR yes 70767204
chr5 173280744 173280748 H1TF2 TRANSFAC yes 67914259
chr5 173280744 173280748 NFE TRANSFAC yes 67914260
chr5 173280744 173280748 SRF TRANSFAC yes 67914261
chr5 173280744 173280748 H1TF2 TRANSFAC yes 70767205
chr5 173280744 173280748 NFE TRANSFAC yes 70767206
chr5 173280744 173280748 SRF TRANSFAC yes 70767207
chr5 173280757 173280772 STAT1 JASPAR yes 67914262
chr5 173280757 173280772 STAT1 JASPAR yes 70767208
chr5 173280759 173280770 STAT1 JASPAR yes 67914263
chr5 173280759 173280770 STAT3 JASPAR yes 67914264
chr5 173280759 173280770 STAT1 JASPAR yes 70767209
chr5 173280759 173280770 STAT3 JASPAR yes 70767210
chr5 173280763 173280768 ETS2 TRANSFAC yes 67914265
chr5 173280763 173280768 ETS2 TRANSFAC yes 70767211
chr5 173280763 173280771 EHF JASPAR yes 67914266
chr5 173280763 173280771 EHF JASPAR yes 70767212
chr5 173280775 173280780 GATA2 JASPAR yes 67914267
chr5 173280775 173280780 GATA2 JASPAR yes 70767213
chr5 173280780 173280794 ZIC1 JASPAR yes 67914268
chr5 173280780 173280794 ZIC1 JASPAR yes 70767214
chr5 173280824 173280834 NKX2-3 JASPAR yes 67914269
chr5 173280824 173280834 NKX2-3 JASPAR yes 70767215
chr5 173280825 173280834 NKX2-8 JASPAR yes 67914270
chr5 173280825 173280834 NKX2-8 JASPAR yes 70767216
chr5 173280837 173280856 RFX2 JASPAR yes 67914271
chr5 173280837 173280856 RFX2 JASPAR yes 70767217
chr5 173280839 173280854 RFX5 JASPAR yes 67914272
chr5 173280839 173280854 RFX5 JASPAR yes 70767218
chr5 173280843 173280862 REST JASPAR yes 67914273
chr5 173280843 173280862 REST JASPAR yes 70767219
SNP sites on vista50240[chr5:173280521-173280844]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 173280646 rs138998214 T C
BHLHE40 EP300 FOXA1 JUND MAX STAT1 STAT5A TAL1 TEAD4
8713981
chr5 173280734 rs768148 G A
BHLHE40 EP300 GATA2 MAX STAT5A
8713982
Genes possibly regulated by vista50240[chr5:173280521-173280844]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 173315283 173388979 + CPEB4 ENSG00000113742.8 173315283 0.72 0.97 5994 65561
Expression level of Genes
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miRNAs possibly regulated by vista50240[chr5:173280521-173280844]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results