EnhancerDB
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  3. vista50241[chr5:173282717-173283022]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50241[chr5:173282717-173283022]
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Tissue distribution of vista50241
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Transcription factor that possibly regulate vista50241[chr5:173282717-173283022]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 173282372 173283130 POLR2A UCSC Txn Factor no Conserved 108537628
chr5 173282405 173283068 GATA1 UCSC Txn Factor no Conserved 108537629
chr5 173282467 173283017 GATA2 UCSC Txn Factor no Conserved 108537630
chr5 173282600 173282950 STAT5A UCSC Txn Factor no Conserved 108537631
chr5 173282608 173282992 EP300 UCSC Txn Factor no Conserved 108537632
chr5 173282613 173283089 STAT1 UCSC Txn Factor no Conserved 108537633
chr5 173282643 173282912 TEAD4 UCSC Txn Factor no Conserved 108537634
chr5 173282659 173282932 TAL1 UCSC Txn Factor no Conserved 108537635
chr5 173282662 173282803 SPI1 UCSC Txn Factor no Conserved 108537636
chr5 173282667 173282887 PML UCSC Txn Factor no Conserved 108537637
chr5 173282700 173282967 TFAP2C UCSC Txn Factor no Conserved 108537638
chr5 173282720 173282903 NR2F2 UCSC Txn Factor no Conserved 108537639
chr5 173282716 173282730 SPI1 JASPAR yes 67914752
chr5 173282716 173282730 SPI1 JASPAR yes 70767220
chr5 173282717 173282738 ZNF263 JASPAR yes 67914753
chr5 173282717 173282738 ZNF263 JASPAR yes 70767221
chr5 173282720 173282726 MZF1 JASPAR yes 67914754
chr5 173282720 173282726 MZF1 JASPAR yes 70767222
chr5 173282724 173282728 YY1 TRANSFAC yes 67914755
chr5 173282724 173282728 YY1 TRANSFAC yes 70767223
chr5 173282725 173282735 NFATC3 JASPAR yes 67914756
chr5 173282725 173282735 NFATC3 JASPAR yes 70767224
chr5 173282726 173282733 NFATC2 JASPAR yes 67914757
chr5 173282726 173282733 NFATC2 JASPAR yes 70767225
chr5 173282760 173282774 GATA2 JASPAR yes 67914758
chr5 173282760 173282774 GATA2 JASPAR yes 70767226
chr5 173282762 173282770 GATA3 JASPAR yes 67914759
chr5 173282762 173282770 GATA3 JASPAR yes 70767227
chr5 173282834 173282838 YY1 TRANSFAC yes 67914760
chr5 173282834 173282838 YY1 TRANSFAC yes 70767228
chr5 173282838 173282847 THAP1 JASPAR yes 67914761
chr5 173282838 173282847 THAP1 JASPAR yes 70767229
chr5 173282841 173282845 LFA1 TRANSFAC yes 67914762
chr5 173282841 173282845 LFA1 TRANSFAC yes 70767230
chr5 173282842 173282857 TFAP2A JASPAR yes 67914763
chr5 173282842 173282857 TFAP2C JASPAR yes 67914764
chr5 173282842 173282857 TFAP2A JASPAR yes 70767231
chr5 173282842 173282857 TFAP2C JASPAR yes 70767232
chr5 173282845 173282856 TFAP2A JASPAR yes 67914765
chr5 173282845 173282856 TFAP2A JASPAR yes 70767233
chr5 173282845 173282857 TFAP2A JASPAR yes 67914766
chr5 173282845 173282857 TFAP2B JASPAR yes 67914767
chr5 173282845 173282857 TFAP2C JASPAR yes 67914768
chr5 173282845 173282857 TFAP2A JASPAR yes 70767234
chr5 173282845 173282857 TFAP2B JASPAR yes 70767235
chr5 173282845 173282857 TFAP2C JASPAR yes 70767236
chr5 173282851 173282862 NFKB1 JASPAR yes 67914769
chr5 173282851 173282862 NFKB1 JASPAR yes 70767237
chr5 173282857 173282864 SPIB JASPAR yes 67914770
chr5 173282857 173282864 SPIB JASPAR yes 70767238
chr5 173282857 173282872 PRDM1 JASPAR yes 67914771
chr5 173282857 173282872 PRDM1 JASPAR yes 70767239
chr5 173282876 173282894 RARA JASPAR yes 67914772
chr5 173282876 173282894 RARA JASPAR yes 70767240
chr5 173282879 173282894 NR2C2 JASPAR yes 67914773
chr5 173282879 173282894 NR2C2 JASPAR yes 70767241
chr5 173282886 173282898 INSM1 JASPAR yes 67914774
chr5 173282886 173282898 INSM1 JASPAR yes 70767242
chr5 173282899 173282908 SP1 TRANSFAC yes 67914775
chr5 173282899 173282908 SP1 TRANSFAC yes 70767243
chr5 173282900 173282908 SP1 TRANSFAC yes 67914776
chr5 173282900 173282908 SP1 TRANSFAC yes 70767244
chr5 173282921 173282935 NR2F1 JASPAR yes 67914777
chr5 173282921 173282935 NR2F1 JASPAR yes 70767245
chr5 173282926 173282939 NR2F1 JASPAR yes 67914778
chr5 173282926 173282939 NR2F1 JASPAR yes 70767246
chr5 173282928 173282936 NR4A2 JASPAR yes 67914779
chr5 173282928 173282936 NR4A2 JASPAR yes 70767247
chr5 173282930 173282934 ESR1 TRANSFAC yes 67914780
chr5 173282930 173282934 ESR1 TRANSFAC yes 70767248
chr5 173282932 173282944 PKNOX1 JASPAR yes 67914781
chr5 173282932 173282944 TGIF2 JASPAR yes 67914782
chr5 173282932 173282944 PKNOX1 JASPAR yes 70767249
chr5 173282932 173282944 TGIF2 JASPAR yes 70767250
chr5 173282937 173282945 MEIS3 JASPAR yes 67914783
chr5 173282937 173282945 MEIS3 JASPAR yes 70767251
chr5 173282938 173282942 NFE TRANSFAC yes 67914784
chr5 173282938 173282942 NFE TRANSFAC yes 70767252
chr5 173282959 173282970 E2F4 JASPAR yes 67914785
chr5 173282959 173282970 E2F6 JASPAR yes 67914786
chr5 173282959 173282970 E2F4 JASPAR yes 70767253
chr5 173282959 173282970 E2F6 JASPAR yes 70767254
chr5 173282960 173282971 E2F1 JASPAR yes 67914787
chr5 173282960 173282971 E2F1 JASPAR yes 70767255
chr5 173282970 173282980 SREBF2 JASPAR yes 67914788
chr5 173282970 173282980 SREBF2 JASPAR yes 70767256
chr5 173282970 173282986 SOX8 JASPAR yes 67914789
chr5 173282970 173282986 SOX8 JASPAR yes 70767257
chr5 173282994 173283001 E2F1 TRANSFAC yes 67914790
chr5 173282994 173283001 E2F1 TRANSFAC yes 70767258
chr5 173282994 173283002 E2F1 JASPAR yes 67914791
chr5 173282994 173283002 E2F1 JASPAR yes 70767259
chr5 173282994 173283006 E2F8 JASPAR yes 67914792
chr5 173282994 173283006 E2F8 JASPAR yes 70767260
chr5 173283003 173283017 EBF1 JASPAR yes 67914793
chr5 173283003 173283017 EBF1 JASPAR yes 70767261
chr5 173283005 173283016 EBF1 JASPAR yes 67914794
chr5 173283005 173283016 EBF1 JASPAR yes 70767262
chr5 173283014 173283024 GSX2 JASPAR yes 67914795
chr5 173283014 173283024 GSX2 JASPAR yes 70767263
chr5 173283017 173283021 YY1 TRANSFAC yes 67914796
chr5 173283017 173283021 YY1 TRANSFAC yes 70767264
SNP sites on vista50241[chr5:173282717-173283022]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 173282782 rs13170074 G A
EP300 GATA1 GATA2 NR2F2 PML POLR2A SPI1 STAT1 STAT5A TAL1 TEAD4 TFAP2C
8714004
chr5 173282856 rs139606511 C G
EP300 GATA1 GATA2 NFKB1 NR2F2 PML POLR2A STAT1 STAT5A TAL1 TEAD4 TFAP2A TFAP2B TFAP2C
8714005
chr5 173282893 rs75159910 C A
EP300 GATA1 GATA2 INSM1 NR2C2 NR2F2 POLR2A RARA STAT1 STAT5A TAL1 TEAD4 TFAP2C
8714006
chr5 173282904 rs13169984 C T
EP300 GATA1 GATA2 POLR2A SP1 STAT1 STAT5A TAL1 TEAD4 TFAP2C
8714007
chr5 173282927 rs13170101 C G,T
EP300 GATA1 GATA2 NR2F1 POLR2A STAT1 STAT5A TAL1 TFAP2C
8714008
chr5 173282931 rs13170376 G A
EP300 ESR1 GATA1 GATA2 NR2F1 NR4A2 POLR2A STAT1 STAT5A TAL1 TFAP2C
8714009
chr5 173283014 rs7717813 G A
EBF1 GATA1 GATA2 GSX2 POLR2A STAT1
8714010
Genes possibly regulated by vista50241[chr5:173282717-173283022]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 173315283 173388979 + CPEB4 ENSG00000113742.8 173315283 0.72 0.97 5994 67739
Expression level of Genes
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miRNAs possibly regulated by vista50241[chr5:173282717-173283022]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results