EnhancerDB
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  3. vista50242[chr5:173285551-173285919]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50242[chr5:173285551-173285919]
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Tissue distribution of vista50242
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Transcription factor that possibly regulate vista50242[chr5:173285551-173285919]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 173285667 173286362 TCF7L2 UCSC Txn Factor no Conserved 108537640
chr5 173285714 173285881 USF2 UCSC Txn Factor no Conserved 108537641
chr5 173285786 173285972 EP300 UCSC Txn Factor no Conserved 108537642
chr5 173285793 173286002 CEBPB UCSC Txn Factor no Conserved 108537643
chr5 173285560 173285566 YY1 JASPAR yes 67915127
chr5 173285560 173285566 YY1 JASPAR yes 70767265
chr5 173285579 173285598 RFX2 JASPAR yes 67915128
chr5 173285579 173285598 RFX2 JASPAR yes 70767266
chr5 173285599 173285609 RORA JASPAR yes 67915129
chr5 173285599 173285609 RORA JASPAR yes 70767267
chr5 173285604 173285608 ESR1 TRANSFAC yes 67915130
chr5 173285604 173285608 ESR1 TRANSFAC yes 70767268
chr5 173285610 173285621 HOXC11 JASPAR yes 67915131
chr5 173285610 173285621 HOXC12 JASPAR yes 67915132
chr5 173285610 173285621 HOXC13 JASPAR yes 67915133
chr5 173285610 173285621 HOXC11 JASPAR yes 70767269
chr5 173285610 173285621 HOXC12 JASPAR yes 70767270
chr5 173285610 173285621 HOXC13 JASPAR yes 70767271
chr5 173285611 173285621 HOXD11 JASPAR yes 67915134
chr5 173285611 173285621 HOXD11 JASPAR yes 70767272
chr5 173285634 173285652 SRF JASPAR yes 67915135
chr5 173285634 173285652 SRF JASPAR yes 70767273
chr5 173285643 173285657 SPI1 JASPAR yes 67915136
chr5 173285643 173285657 SPI1 JASPAR yes 70767274
chr5 173285649 173285654 ETS2 TRANSFAC yes 67915137
chr5 173285649 173285654 ETS2 TRANSFAC yes 70767275
chr5 173285683 173285686 MYB TRANSFAC yes 67915138
chr5 173285683 173285686 MYB TRANSFAC yes 70767276
chr5 173285685 173285703 NR3C1 JASPAR yes 67915139
chr5 173285685 173285703 NR3C1 JASPAR yes 70767277
chr5 173285727 173285737 HOXA13 JASPAR yes 67915140
chr5 173285727 173285737 HOXB13 JASPAR yes 67915141
chr5 173285727 173285737 HOXD13 JASPAR yes 67915142
chr5 173285727 173285737 HOXA13 JASPAR yes 70767278
chr5 173285727 173285737 HOXB13 JASPAR yes 70767279
chr5 173285727 173285737 HOXD13 JASPAR yes 70767280
chr5 173285727 173285738 HOXA10 JASPAR yes 67915143
chr5 173285727 173285738 HOXA10 JASPAR yes 70767281
chr5 173285728 173285737 CDX1 JASPAR yes 67915144
chr5 173285728 173285737 CDX1 JASPAR yes 70767282
chr5 173285728 173285739 CDX2 JASPAR yes 67915145
chr5 173285728 173285739 CDX2 JASPAR yes 70767283
chr5 173285744 173285756 POU3F1 JASPAR yes 67915146
chr5 173285744 173285756 POU3F2 JASPAR yes 67915147
chr5 173285744 173285756 POU3F1 JASPAR yes 70767284
chr5 173285744 173285756 POU3F2 JASPAR yes 70767285
chr5 173285747 173285750 MYB TRANSFAC yes 67915148
chr5 173285747 173285750 MYB TRANSFAC yes 70767286
chr5 173285747 173285758 CDX2 JASPAR yes 67915149
chr5 173285747 173285758 RUNX1 JASPAR yes 67915150
chr5 173285747 173285758 CDX2 JASPAR yes 70767287
chr5 173285747 173285758 RUNX1 JASPAR yes 70767288
chr5 173285748 173285759 HOXA10 JASPAR yes 67915151
chr5 173285748 173285759 HOXA10 JASPAR yes 70767289
chr5 173285749 173285758 CDX1 JASPAR yes 67915152
chr5 173285749 173285758 CDX1 JASPAR yes 70767290
chr5 173285749 173285759 HOXA13 JASPAR yes 67915153
chr5 173285749 173285759 HOXB13 JASPAR yes 67915154
chr5 173285749 173285759 HOXA13 JASPAR yes 70767291
chr5 173285749 173285759 HOXB13 JASPAR yes 70767292
chr5 173285751 173285766 IRF9 JASPAR yes 67915155
chr5 173285751 173285766 IRF9 JASPAR yes 70767293
chr5 173285785 173285799 CREB3 JASPAR yes 67915156
chr5 173285785 173285799 CREB3L1 JASPAR yes 67915157
chr5 173285785 173285799 CREB3 JASPAR yes 70767294
chr5 173285785 173285799 CREB3L1 JASPAR yes 70767295
chr5 173285786 173285796 MAX JASPAR yes 67915158
chr5 173285786 173285796 MAX JASPAR yes 70767296
chr5 173285786 173285797 USF1 JASPAR yes 67915159
chr5 173285786 173285797 USF2 JASPAR yes 67915160
chr5 173285786 173285797 USF1 JASPAR yes 70767297
chr5 173285786 173285797 USF2 JASPAR yes 70767298
chr5 173285786 173285800 XBP1 JASPAR yes 67915161
chr5 173285786 173285800 XBP1 JASPAR yes 70767299
chr5 173285787 173285797 BHLHE41 JASPAR yes 67915162
chr5 173285787 173285797 MAX JASPAR yes 67915163
chr5 173285787 173285797 MLXIPL JASPAR yes 67915164
chr5 173285787 173285797 MLX JASPAR yes 67915165
chr5 173285787 173285797 MNT JASPAR yes 67915166
chr5 173285787 173285797 SREBF2 JASPAR yes 67915167
chr5 173285787 173285797 TFE3 JASPAR yes 67915168
chr5 173285787 173285797 TFEB JASPAR yes 67915169
chr5 173285787 173285797 TFEC JASPAR yes 67915170
chr5 173285787 173285797 BHLHE41 JASPAR yes 70767300
chr5 173285787 173285797 MAX JASPAR yes 70767301
chr5 173285787 173285797 MLXIPL JASPAR yes 70767302
chr5 173285787 173285797 MLX JASPAR yes 70767303
chr5 173285787 173285797 MNT JASPAR yes 70767304
chr5 173285787 173285797 SREBF2 JASPAR yes 70767305
chr5 173285787 173285797 TFE3 JASPAR yes 70767306
chr5 173285787 173285797 TFEB JASPAR yes 70767307
chr5 173285787 173285797 TFEC JASPAR yes 70767308
chr5 173285787 173285798 USF2 JASPAR yes 67915171
chr5 173285787 173285798 USF2 JASPAR yes 70767309
chr5 173285788 173285798 MAX JASPAR yes 67915172
chr5 173285788 173285798 MAX JASPAR yes 70767310
chr5 173285789 173285794 MYC TRANSFAC yes 67915173
chr5 173285789 173285794 USF1 TRANSFAC yes 67915174
chr5 173285789 173285794 USF2 TRANSFAC yes 67915175
chr5 173285789 173285794 MYC TRANSFAC yes 70767311
chr5 173285789 173285794 USF1 TRANSFAC yes 70767312
chr5 173285789 173285794 USF2 TRANSFAC yes 70767313
chr5 173285789 173285796 USF1 JASPAR yes 67915176
chr5 173285789 173285796 USF1 JASPAR yes 70767314
chr5 173285798 173285812 GATA2 JASPAR yes 67915177
chr5 173285798 173285812 GATA2 JASPAR yes 70767315
chr5 173285800 173285805 ETS2 TRANSFAC yes 67915178
chr5 173285800 173285805 ETS2 TRANSFAC yes 70767316
chr5 173285802 173285810 GATA5 JASPAR yes 67915179
chr5 173285802 173285810 GATA5 JASPAR yes 70767317
chr5 173285815 173285830 SOX21 JASPAR yes 67915180
chr5 173285815 173285830 SOX21 JASPAR yes 70767318
chr5 173285815 173285836 REST JASPAR yes 67915181
chr5 173285815 173285836 REST JASPAR yes 70767319
chr5 173285818 173285829 ESRRA JASPAR yes 67915182
chr5 173285818 173285829 ESRRA JASPAR yes 70767320
chr5 173285837 173285851 SPIC JASPAR yes 67915183
chr5 173285837 173285851 SPIC JASPAR yes 70767321
chr5 173285845 173285849 YY1 TRANSFAC yes 67915184
chr5 173285845 173285849 YY1 TRANSFAC yes 70767322
chr5 173285869 173285876 NFATC2 JASPAR yes 67915185
chr5 173285869 173285876 NFATC2 JASPAR yes 70767323
chr5 173285869 173285883 E2F7 JASPAR yes 67915186
chr5 173285869 173285883 E2F7 JASPAR yes 70767324
chr5 173285870 173285882 E2F8 JASPAR yes 67915187
chr5 173285870 173285882 E2F8 JASPAR yes 70767325
chr5 173285877 173285881 H1TF2 TRANSFAC yes 67915188
chr5 173285877 173285881 NFE TRANSFAC yes 67915189
chr5 173285877 173285881 SRF TRANSFAC yes 67915190
chr5 173285877 173285881 H1TF2 TRANSFAC yes 70767326
chr5 173285877 173285881 NFE TRANSFAC yes 70767327
chr5 173285877 173285881 SRF TRANSFAC yes 70767328
chr5 173285901 173285917 SOX4 JASPAR yes 67915191
chr5 173285901 173285917 SOX4 JASPAR yes 70767329
SNP sites on vista50242[chr5:173285551-173285919]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 173285576 rs2561774 C G no 8714040
chr5 173285582 rs115366913 T C
RFX2
8714041
chr5 173285739 rs6894596 G A
CDX2 TCF7L2 USF2
8714042
Genes possibly regulated by vista50242[chr5:173285551-173285919]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 173315283 173388979 + CPEB4 ENSG00000113742.8 173315283 0.72 0.97 5994 70636
Expression level of Genes
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miRNAs possibly regulated by vista50242[chr5:173285551-173285919]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results