EnhancerDB
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  3. vista50243[chr5:173293319-173293521]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50243[chr5:173293319-173293521]
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Tissue distribution of vista50243
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Transcription factor that possibly regulate vista50243[chr5:173293319-173293521]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 173293342 173294365 POLR2A UCSC Txn Factor no Conserved 108537644
chr5 173293342 173294365 POLR2A UCSC Txn Factor no Conserved 108537645
chr5 173293316 173293329 ATF4 JASPAR yes 67916180
chr5 173293316 173293329 ATF4 JASPAR yes 70767330
chr5 173293317 173293328 CEBPA JASPAR yes 67916181
chr5 173293317 173293328 CEBPA JASPAR yes 70767331
chr5 173293318 173293329 CEBPB JASPAR yes 67916182
chr5 173293318 173293329 CEBPB JASPAR yes 70767332
chr5 173293318 173293331 DUXA JASPAR yes 67916183
chr5 173293318 173293331 DUXA JASPAR yes 70767333
chr5 173293334 173293338 YY1 TRANSFAC yes 67916184
chr5 173293334 173293338 YY1 TRANSFAC yes 70767334
chr5 173293358 173293373 MEF2C JASPAR yes 67916185
chr5 173293358 173293373 MEF2C JASPAR yes 70767335
chr5 173293362 173293368 TBP TRANSFAC yes 67916186
chr5 173293362 173293368 TBP TRANSFAC yes 70767336
chr5 173293369 173293390 IRF1 JASPAR yes 67916187
chr5 173293369 173293390 IRF1 JASPAR yes 70767337
chr5 173293373 173293387 SPI1 JASPAR yes 67916188
chr5 173293373 173293387 SPI1 JASPAR yes 70767338
chr5 173293378 173293383 ETS2 TRANSFAC yes 67916189
chr5 173293378 173293383 ETS2 TRANSFAC yes 70767339
chr5 173293380 173293401 IRF1 JASPAR yes 67916190
chr5 173293380 173293401 IRF1 JASPAR yes 70767340
chr5 173293381 173293402 IRF1 JASPAR yes 67916191
chr5 173293381 173293402 IRF1 JASPAR yes 70767341
chr5 173293382 173293403 IRF1 JASPAR yes 67916192
chr5 173293382 173293403 IRF1 JASPAR yes 70767342
chr5 173293383 173293397 IRF7 JASPAR yes 67916193
chr5 173293383 173293397 IRF7 JASPAR yes 70767343
chr5 173293384 173293399 FOXP1 JASPAR yes 67916194
chr5 173293384 173293399 FOXP1 JASPAR yes 70767344
chr5 173293385 173293400 FOXP1 JASPAR yes 67916195
chr5 173293385 173293400 FOXP1 JASPAR yes 70767345
chr5 173293386 173293401 FOXP1 JASPAR yes 67916196
chr5 173293386 173293401 FOXP1 JASPAR yes 70767346
chr5 173293386 173293407 IRF1 JASPAR yes 67916197
chr5 173293386 173293407 IRF1 JASPAR yes 70767347
chr5 173293387 173293402 FOXP1 JASPAR yes 67916198
chr5 173293387 173293402 FOXP1 JASPAR yes 70767348
chr5 173293387 173293408 IRF1 JASPAR yes 67916199
chr5 173293387 173293408 IRF1 JASPAR yes 70767349
chr5 173293388 173293403 FOXP1 JASPAR yes 67916200
chr5 173293388 173293403 FOXP1 JASPAR yes 70767350
chr5 173293408 173293414 HiNF-A TRANSFAC yes 67916201
chr5 173293408 173293414 HiNF-A TRANSFAC yes 70767351
chr5 173293419 173293429 SP1 JASPAR yes 67916202
chr5 173293419 173293429 SP1 JASPAR yes 70767352
chr5 173293421 173293426 SP1 TRANSFAC yes 67916203
chr5 173293421 173293426 SP1 TRANSFAC yes 70767353
chr5 173293422 173293427 SP1 TRANSFAC yes 67916204
chr5 173293422 173293427 SP1 TRANSFAC yes 70767354
chr5 173293422 173293428 SP1 TRANSFAC yes 67916205
chr5 173293422 173293428 SP1 TRANSFAC yes 70767355
chr5 173293425 173293436 NFKB1 JASPAR yes 67916206
chr5 173293425 173293436 NFKB1 JASPAR yes 70767356
chr5 173293444 173293448 H1TF2 TRANSFAC yes 67916207
chr5 173293444 173293448 NFE TRANSFAC yes 67916208
chr5 173293444 173293448 SRF TRANSFAC yes 67916209
chr5 173293444 173293448 H1TF2 TRANSFAC yes 70767357
chr5 173293444 173293448 NFE TRANSFAC yes 70767358
chr5 173293444 173293448 SRF TRANSFAC yes 70767359
chr5 173293447 173293452 MYB TRANSFAC yes 67916210
chr5 173293447 173293452 MYB TRANSFAC yes 70767360
chr5 173293457 173293467 MSC JASPAR yes 67916211
chr5 173293457 173293467 MSC JASPAR yes 70767361
chr5 173293492 173293504 HNF1B JASPAR yes 67916212
chr5 173293492 173293504 HNF1B JASPAR yes 70767362
chr5 173293493 173293507 SPI1 JASPAR yes 67916213
chr5 173293493 173293507 SPIC JASPAR yes 67916214
chr5 173293493 173293507 SPI1 JASPAR yes 70767363
chr5 173293493 173293507 SPIC JASPAR yes 70767364
chr5 173293494 173293507 ELF1 JASPAR yes 67916215
chr5 173293494 173293507 ELF1 JASPAR yes 70767365
chr5 173293495 173293507 EHF JASPAR yes 67916216
chr5 173293495 173293507 ELF1 JASPAR yes 67916217
chr5 173293495 173293507 ELF4 JASPAR yes 67916218
chr5 173293495 173293507 EHF JASPAR yes 70767366
chr5 173293495 173293507 ELF1 JASPAR yes 70767367
chr5 173293495 173293507 ELF4 JASPAR yes 70767368
chr5 173293495 173293508 ELF3 JASPAR yes 67916219
chr5 173293495 173293508 ELF3 JASPAR yes 70767369
chr5 173293496 173293507 ELF5 JASPAR yes 67916220
chr5 173293496 173293507 ETV2 JASPAR yes 67916221
chr5 173293496 173293507 ELF5 JASPAR yes 70767370
chr5 173293496 173293507 ETV2 JASPAR yes 70767371
chr5 173293497 173293507 ERF JASPAR yes 67916222
chr5 173293497 173293507 ETS1 JASPAR yes 67916223
chr5 173293497 173293507 ERF JASPAR yes 70767372
chr5 173293497 173293507 ETS1 JASPAR yes 70767373
chr5 173293497 173293508 ELK4 JASPAR yes 67916224
chr5 173293497 173293508 FLI1 JASPAR yes 67916225
chr5 173293497 173293508 ELK4 JASPAR yes 70767374
chr5 173293497 173293508 FLI1 JASPAR yes 70767375
chr5 173293521 173293525 NFE TRANSFAC yes 67916226
chr5 173293521 173293525 NFE TRANSFAC yes 70767376
SNP sites on vista50243[chr5:173293319-173293521]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 173293350 rs372678539 A T
POLR2A
8714134
chr5 173293379 rs568934415 A C
ETS2 IRF1 POLR2A SPI1
8714135
chr5 173293409 rs359437 A C
HiNF-A POLR2A
8714136
chr5 173293444 rs114073526 G A
H1TF2 NFE POLR2A SRF
8714137
chr5 173293449 rs77204117 T C
MYB POLR2A
8714138
chr5 173293506 rs544363889 C G,T
EHF ELF1 ELF3 ELF4 ELF5 ELK4 ERF ETS1 ETV2 FLI1 POLR2A SPI1 SPIC
8714139
Genes possibly regulated by vista50243[chr5:173293319-173293521]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 173315283 173388979 + CPEB4 ENSG00000113742.8 173315283 0.72 0.97 5994 78238
Expression level of Genes
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miRNAs possibly regulated by vista50243[chr5:173293319-173293521]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results