EnhancerDB
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  3. vista50248[chr5:173346462-173346760]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50248[chr5:173346462-173346760]
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Tissue distribution of vista50248
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Transcription factor that possibly regulate vista50248[chr5:173346462-173346760]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 173346453 173346467 CREB3L1 JASPAR yes 67922071
chr5 173346453 173346467 CREB3L1 JASPAR yes 70767511
chr5 173346474 173346485 FOXH1 JASPAR yes 67922072
chr5 173346474 173346485 FOXH1 JASPAR yes 70767512
chr5 173346503 173346524 IRF1 JASPAR yes 67922073
chr5 173346503 173346524 IRF1 JASPAR yes 70767513
chr5 173346510 173346525 FOXP1 JASPAR yes 67922074
chr5 173346510 173346525 FOXP1 JASPAR yes 70767514
chr5 173346511 173346522 FOXP2 JASPAR yes 67922075
chr5 173346511 173346522 FOXP2 JASPAR yes 70767515
chr5 173346513 173346521 FOXO3 JASPAR yes 67922076
chr5 173346513 173346521 FOXO3 JASPAR yes 70767516
chr5 173346517 173346522 ETS2 TRANSFAC yes 67922077
chr5 173346517 173346522 ETS2 TRANSFAC yes 70767517
chr5 173346523 173346534 CDX2 JASPAR yes 67922078
chr5 173346523 173346534 CDX2 JASPAR yes 70767518
chr5 173346524 173346528 TEAD2 TRANSFAC yes 67922079
chr5 173346524 173346528 TEAD2 TRANSFAC yes 70767519
chr5 173346524 173346535 HOXA10 JASPAR yes 67922080
chr5 173346524 173346535 HOXA10 JASPAR yes 70767520
chr5 173346525 173346534 CDX1 JASPAR yes 67922081
chr5 173346525 173346534 CDX1 JASPAR yes 70767521
chr5 173346525 173346535 HOXA13 JASPAR yes 67922082
chr5 173346525 173346535 HOXD13 JASPAR yes 67922083
chr5 173346525 173346535 HOXA13 JASPAR yes 70767522
chr5 173346525 173346535 HOXD13 JASPAR yes 70767523
chr5 173346552 173346563 NFE2L2 JASPAR yes 67922084
chr5 173346552 173346563 NFE2L2 JASPAR yes 70767524
chr5 173346554 173346558 NFE TRANSFAC yes 67922085
chr5 173346554 173346558 NFE TRANSFAC yes 70767525
chr5 173346554 173346568 JUN JASPAR yes 67922086
chr5 173346554 173346568 STAT1 JASPAR yes 67922087
chr5 173346554 173346568 JUN JASPAR yes 70767526
chr5 173346554 173346568 STAT1 JASPAR yes 70767527
chr5 173346559 173346570 FLI1 JASPAR yes 67922088
chr5 173346559 173346570 FLI1 JASPAR yes 70767528
chr5 173346560 173346564 YY1 TRANSFAC yes 67922089
chr5 173346560 173346564 YY1 TRANSFAC yes 70767529
chr5 173346560 173346575 STAT1 JASPAR yes 67922090
chr5 173346560 173346575 STAT1 JASPAR yes 70767530
chr5 173346561 173346569 FEV JASPAR yes 67922091
chr5 173346561 173346569 FEV JASPAR yes 70767531
chr5 173346562 173346573 STAT1 JASPAR yes 67922092
chr5 173346562 173346573 STAT3 JASPAR yes 67922093
chr5 173346562 173346573 STAT1 JASPAR yes 70767532
chr5 173346562 173346573 STAT3 JASPAR yes 70767533
chr5 173346597 173346608 HOXA10 JASPAR yes 67922094
chr5 173346597 173346608 HOXA10 JASPAR yes 70767534
chr5 173346598 173346608 HOXD13 JASPAR yes 67922095
chr5 173346598 173346608 HOXD13 JASPAR yes 70767535
chr5 173346602 173346608 TBP TRANSFAC yes 67922096
chr5 173346602 173346608 TBP TRANSFAC yes 70767536
chr5 173346608 173346623 LEF1 JASPAR yes 67922097
chr5 173346608 173346623 LEF1 JASPAR yes 70767537
chr5 173346609 173346623 TCF7L2 JASPAR yes 67922098
chr5 173346609 173346623 TCF7L2 JASPAR yes 70767538
chr5 173346612 173346618 LEF1 TRANSFAC yes 67922099
chr5 173346612 173346618 SOX10 JASPAR yes 67922100
chr5 173346612 173346618 LEF1 TRANSFAC yes 70767539
chr5 173346612 173346618 SOX10 JASPAR yes 70767540
chr5 173346638 173346653 LEF1 JASPAR yes 67922101
chr5 173346638 173346653 LEF1 JASPAR yes 70767541
chr5 173346640 173346645 ETS2 TRANSFAC yes 67922102
chr5 173346640 173346645 ETS2 TRANSFAC yes 70767542
chr5 173346650 173346661 NFIL3 JASPAR yes 67922103
chr5 173346650 173346661 NFIL3 JASPAR yes 70767543
chr5 173346651 173346663 DBP JASPAR yes 67922104
chr5 173346651 173346663 HLF JASPAR yes 67922105
chr5 173346651 173346663 TEF JASPAR yes 67922106
chr5 173346651 173346663 DBP JASPAR yes 70767544
chr5 173346651 173346663 HLF JASPAR yes 70767545
chr5 173346651 173346663 TEF JASPAR yes 70767546
chr5 173346653 173346664 NFIL3 JASPAR yes 67922107
chr5 173346653 173346664 NFIL3 JASPAR yes 70767547
chr5 173346653 173346670 PAX1 JASPAR yes 67922108
chr5 173346653 173346670 PAX1 JASPAR yes 70767548
chr5 173346656 173346660 TEAD2 TRANSFAC yes 67922109
chr5 173346656 173346660 TEAD2 TRANSFAC yes 70767549
chr5 173346657 173346665 RHOXF1 JASPAR yes 67922110
chr5 173346657 173346665 RHOXF1 JASPAR yes 70767550
chr5 173346672 173346690 MAFF JASPAR yes 67922111
chr5 173346672 173346690 MAFF JASPAR yes 70767551
chr5 173346674 173346678 YY1 TRANSFAC yes 67922112
chr5 173346674 173346678 YY1 TRANSFAC yes 70767552
chr5 173346674 173346685 NRL JASPAR yes 67922113
chr5 173346674 173346685 NRL JASPAR yes 70767553
chr5 173346674 173346689 MAFK JASPAR yes 67922114
chr5 173346674 173346689 MAFK JASPAR yes 70767554
chr5 173346688 173346697 SP1 TRANSFAC yes 67922115
chr5 173346688 173346697 SP1 TRANSFAC yes 70767555
chr5 173346688 173346698 SP1 JASPAR yes 67922116
chr5 173346688 173346698 SP1 JASPAR yes 70767556
chr5 173346689 173346698 SP1 TRANSFAC yes 67922117
chr5 173346689 173346698 SP1 TRANSFAC yes 70767557
chr5 173346690 173346696 MAZ TRANSFAC yes 67922118
chr5 173346690 173346696 MAZ TRANSFAC yes 70767558
chr5 173346691 173346701 MZF1 JASPAR yes 67922119
chr5 173346691 173346701 MZF1 JASPAR yes 70767559
chr5 173346695 173346700 ETS2 TRANSFAC yes 67922120
chr5 173346695 173346700 ETS2 TRANSFAC yes 70767560
chr5 173346699 173346705 HiNF-A TRANSFAC yes 67922121
chr5 173346699 173346705 HiNF-A TRANSFAC yes 70767561
chr5 173346707 173346712 USF2 TRANSFAC yes 67922122
chr5 173346707 173346712 USF2 TRANSFAC yes 70767562
chr5 173346719 173346735 RFX2 JASPAR yes 67922123
chr5 173346719 173346735 RFX3 JASPAR yes 67922124
chr5 173346719 173346735 RFX4 JASPAR yes 67922125
chr5 173346719 173346735 RFX2 JASPAR yes 70767563
chr5 173346719 173346735 RFX3 JASPAR yes 70767564
chr5 173346719 173346735 RFX4 JASPAR yes 70767565
chr5 173346721 173346732 CDX2 JASPAR yes 67922126
chr5 173346721 173346732 CDX2 JASPAR yes 70767566
chr5 173346722 173346733 HOXA10 JASPAR yes 67922127
chr5 173346722 173346733 HOXC11 JASPAR yes 67922128
chr5 173346722 173346733 HOXC12 JASPAR yes 67922129
chr5 173346722 173346733 HOXC13 JASPAR yes 67922130
chr5 173346722 173346733 HOXD12 JASPAR yes 67922131
chr5 173346722 173346733 HOXA10 JASPAR yes 70767567
chr5 173346722 173346733 HOXC11 JASPAR yes 70767568
chr5 173346722 173346733 HOXC12 JASPAR yes 70767569
chr5 173346722 173346733 HOXC13 JASPAR yes 70767570
chr5 173346722 173346733 HOXD12 JASPAR yes 70767571
chr5 173346723 173346732 CDX1 JASPAR yes 67922132
chr5 173346723 173346732 CDX1 JASPAR yes 70767572
chr5 173346723 173346733 HOXA13 JASPAR yes 67922133
chr5 173346723 173346733 HOXC10 JASPAR yes 67922134
chr5 173346723 173346733 HOXD11 JASPAR yes 67922135
chr5 173346723 173346733 HOXD13 JASPAR yes 67922136
chr5 173346723 173346733 HOXA13 JASPAR yes 70767573
chr5 173346723 173346733 HOXC10 JASPAR yes 70767574
chr5 173346723 173346733 HOXD11 JASPAR yes 70767575
chr5 173346723 173346733 HOXD13 JASPAR yes 70767576
chr5 173346728 173346744 SOX8 JASPAR yes 67922137
chr5 173346728 173346744 SOX8 JASPAR yes 70767577
chr5 173346733 173346738 GATA2 JASPAR yes 67922138
chr5 173346733 173346738 GATA2 JASPAR yes 70767578
chr5 173346749 173346753 YY1 TRANSFAC yes 67922139
chr5 173346749 173346753 YY1 TRANSFAC yes 70767579
chr5 173346758 173346771 SCRT2 JASPAR yes 67922140
chr5 173346758 173346771 SCRT2 JASPAR yes 70767580
SNP sites on vista50248[chr5:173346462-173346760]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 173346555 rs143927702 C G
JUN NFE NFE2L2 STAT1
8714537
chr5 173346578 rs359417 A G no 8714538
chr5 173346585 rs359418 G C no 8714539
chr5 173346625 rs577073263 TGAA T no 8714540
chr5 173346651 rs359419 T C
DBP HLF LEF1 NFIL3 TEF
8714541
Genes possibly regulated by vista50248[chr5:173346462-173346760]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 173315283 173388979 + CPEB4 ENSG00000113742.8 173315283 0.72 0.97 5994 68821
chr5 173400782 173433143 + C5orf47 ENSG00000185056.9 173400782 0.91 1.0 5995 45978
Expression level of Genes
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miRNAs possibly regulated by vista50248[chr5:173346462-173346760]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results