EnhancerDB
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  3. vista50249[chr5:173347710-173348091]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50249[chr5:173347710-173348091]
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Tissue distribution of vista50249
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Transcription factor that possibly regulate vista50249[chr5:173347710-173348091]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 173347708 173347720 TEF JASPAR yes 67922312
chr5 173347708 173347720 TEF JASPAR yes 70767581
chr5 173347712 173347723 NFIL3 JASPAR yes 67922313
chr5 173347712 173347723 NFIL3 JASPAR yes 70767582
chr5 173347713 173347717 YY1 TRANSFAC yes 67922314
chr5 173347713 173347717 YY1 TRANSFAC yes 70767583
chr5 173347740 173347744 YY1 TRANSFAC yes 67922315
chr5 173347740 173347744 YY1 TRANSFAC yes 70767584
chr5 173347746 173347762 SOX8 JASPAR yes 67922316
chr5 173347746 173347762 SOX8 JASPAR yes 70767585
chr5 173347757 173347767 HOXA13 JASPAR yes 67922317
chr5 173347757 173347767 HOXB13 JASPAR yes 67922318
chr5 173347757 173347767 HOXD13 JASPAR yes 67922319
chr5 173347757 173347767 HOXA13 JASPAR yes 70767586
chr5 173347757 173347767 HOXB13 JASPAR yes 70767587
chr5 173347757 173347767 HOXD13 JASPAR yes 70767588
chr5 173347757 173347768 HOXA10 JASPAR yes 67922320
chr5 173347757 173347768 HOXA10 JASPAR yes 70767589
chr5 173347758 173347767 CDX1 JASPAR yes 67922321
chr5 173347758 173347767 CDX1 JASPAR yes 70767590
chr5 173347761 173347772 CEBPA JASPAR yes 67922322
chr5 173347761 173347772 CEBPA JASPAR yes 70767591
chr5 173347761 173347773 HLF JASPAR yes 67922323
chr5 173347761 173347773 HLF JASPAR yes 70767592
chr5 173347762 173347773 CEBPB JASPAR yes 67922324
chr5 173347762 173347773 CEBPB JASPAR yes 70767593
chr5 173347767 173347778 BATF JASPAR yes 67922325
chr5 173347767 173347778 BATF JASPAR yes 70767594
chr5 173347793 173347803 MLXIPL JASPAR yes 67922326
chr5 173347793 173347803 SREBF2 JASPAR yes 67922327
chr5 173347793 173347803 TFE3 JASPAR yes 67922328
chr5 173347793 173347803 TFEB JASPAR yes 67922329
chr5 173347793 173347803 TFEC JASPAR yes 67922330
chr5 173347793 173347803 MLXIPL JASPAR yes 70767595
chr5 173347793 173347803 SREBF2 JASPAR yes 70767596
chr5 173347793 173347803 TFE3 JASPAR yes 70767597
chr5 173347793 173347803 TFEB JASPAR yes 70767598
chr5 173347793 173347803 TFEC JASPAR yes 70767599
chr5 173347793 173347804 USF1 JASPAR yes 67922331
chr5 173347793 173347804 USF2 JASPAR yes 67922332
chr5 173347793 173347804 USF1 JASPAR yes 70767600
chr5 173347793 173347804 USF2 JASPAR yes 70767601
chr5 173347817 173347821 YY1 TRANSFAC yes 67922333
chr5 173347817 173347821 YY1 TRANSFAC yes 70767602
chr5 173347838 173347842 TEAD2 TRANSFAC yes 67922334
chr5 173347838 173347842 TEAD2 TRANSFAC yes 70767603
chr5 173347844 173347851 GATA1 TRANSFAC yes 67922335
chr5 173347844 173347851 GATA1 TRANSFAC yes 70767604
chr5 173347847 173347851 TEAD2 TRANSFAC yes 67922336
chr5 173347847 173347851 TEAD2 TRANSFAC yes 70767605
chr5 173347915 173347921 GATA3 JASPAR yes 67922337
chr5 173347915 173347921 GATA3 JASPAR yes 70767606
chr5 173347921 173347936 MEF2A JASPAR yes 67922338
chr5 173347921 173347936 MEF2A JASPAR yes 70767607
chr5 173347922 173347934 MEF2A JASPAR yes 67922339
chr5 173347922 173347934 MEF2A JASPAR yes 70767608
chr5 173347923 173347933 MEF2A JASPAR yes 67922340
chr5 173347923 173347933 MEF2A JASPAR yes 70767609
chr5 173347933 173347941 FOXL1 JASPAR yes 67922341
chr5 173347933 173347941 FOXL1 JASPAR yes 70767610
chr5 173347935 173347943 FOXO3 JASPAR yes 67922342
chr5 173347935 173347943 FOXO3 JASPAR yes 70767611
chr5 173347939 173347950 FOXP2 JASPAR yes 67922343
chr5 173347939 173347950 FOXP2 JASPAR yes 70767612
chr5 173347944 173347954 MYF6 JASPAR yes 67922344
chr5 173347944 173347954 MYF6 JASPAR yes 70767613
chr5 173347946 173347951 MYC TRANSFAC yes 67922345
chr5 173347946 173347951 MYC TRANSFAC yes 70767614
chr5 173347958 173347965 E2F1 TRANSFAC yes 67922346
chr5 173347958 173347965 E2F1 TRANSFAC yes 70767615
chr5 173347976 173347982 TCF4 TRANSFAC yes 67922347
chr5 173347976 173347982 TCF4 TRANSFAC yes 70767616
chr5 173347986 173347990 YY1 TRANSFAC yes 67922348
chr5 173347986 173347990 YY1 TRANSFAC yes 70767617
chr5 173348022 173348026 YY1 TRANSFAC yes 67922349
chr5 173348022 173348026 YY1 TRANSFAC yes 70767618
chr5 173348041 173348050 VENTX JASPAR yes 67922350
chr5 173348041 173348050 VENTX JASPAR yes 70767619
chr5 173348044 173348048 YY1 TRANSFAC yes 67922351
chr5 173348044 173348048 YY1 TRANSFAC yes 70767620
chr5 173348044 173348052 HOXA5 JASPAR yes 67922352
chr5 173348044 173348052 HOXA5 JASPAR yes 70767621
chr5 173348049 173348060 NFE2L2 JASPAR yes 67922353
chr5 173348049 173348060 NFE2L2 JASPAR yes 70767622
chr5 173348056 173348066 TEAD4 JASPAR yes 67922354
chr5 173348056 173348066 TEAD4 JASPAR yes 70767623
chr5 173348056 173348068 TEAD1 JASPAR yes 67922355
chr5 173348056 173348068 TEAD1 JASPAR yes 70767624
chr5 173348057 173348065 TEAD3 JASPAR yes 67922356
chr5 173348057 173348065 TEAD3 JASPAR yes 70767625
chr5 173348071 173348083 PKNOX1 JASPAR yes 67922357
chr5 173348071 173348083 PKNOX2 JASPAR yes 67922358
chr5 173348071 173348083 TGIF1 JASPAR yes 67922359
chr5 173348071 173348083 TGIF2 JASPAR yes 67922360
chr5 173348071 173348083 PKNOX1 JASPAR yes 70767626
chr5 173348071 173348083 PKNOX2 JASPAR yes 70767627
chr5 173348071 173348083 TGIF1 JASPAR yes 70767628
chr5 173348071 173348083 TGIF2 JASPAR yes 70767629
chr5 173348081 173348099 TP53 JASPAR yes 67922361
chr5 173348081 173348099 TP53 JASPAR yes 70767630
chr5 173348082 173348097 TP53 JASPAR yes 67922362
chr5 173348082 173348097 TP53 JASPAR yes 70767631
SNP sites on vista50249[chr5:173347710-173348091]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 173347871 rs114588604 C T no 8714551
chr5 173347967 rs550722810 C T no 8714552
chr5 173348025 rs56376721 T C
YY1
8714553
Genes possibly regulated by vista50249[chr5:173347710-173348091]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 173315283 173388979 + CPEB4 ENSG00000113742.8 173315283 0.72 0.97 5994 67573
chr5 173400782 173433143 + C5orf47 ENSG00000185056.9 173400782 0.91 1.0 5995 47309
Expression level of Genes
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miRNAs possibly regulated by vista50249[chr5:173347710-173348091]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results