EnhancerDB
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  3. vista50251[chr5:173390340-173390538]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50251[chr5:173390340-173390538]
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Tissue distribution of vista50251
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Transcription factor that possibly regulate vista50251[chr5:173390340-173390538]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 173390103 173390413 NR3C1 UCSC Txn Factor no Conserved 108537654
chr5 173390338 173390353 TFAP2A JASPAR yes 67925443
chr5 173390338 173390353 TFAP2A JASPAR yes 70767664
chr5 173390341 173390353 TFAP2B JASPAR yes 67925444
chr5 173390341 173390353 TFAP2B JASPAR yes 70767665
chr5 173390363 173390377 JUN JASPAR yes 67925445
chr5 173390363 173390377 JUN JASPAR yes 70767666
chr5 173390367 173390378 FOS JASPAR yes 67925446
chr5 173390367 173390378 FOSL1 JASPAR yes 67925447
chr5 173390367 173390378 JUND JASPAR yes 67925448
chr5 173390367 173390378 FOS JASPAR yes 70767667
chr5 173390367 173390378 FOSL1 JASPAR yes 70767668
chr5 173390367 173390378 JUND JASPAR yes 70767669
chr5 173390369 173390375 JUN TRANSFAC yes 67925449
chr5 173390369 173390375 JUN TRANSFAC yes 70767670
chr5 173390402 173390423 IRF1 JASPAR yes 67925450
chr5 173390402 173390423 IRF1 JASPAR yes 70767671
chr5 173390404 173390419 STAT2 JASPAR yes 67925451
chr5 173390404 173390419 STAT2 JASPAR yes 70767672
chr5 173390407 173390422 FOXP1 JASPAR yes 67925452
chr5 173390407 173390422 FOXP1 JASPAR yes 70767673
chr5 173390414 173390419 GATA2 JASPAR yes 67925453
chr5 173390414 173390419 GATA2 JASPAR yes 70767674
chr5 173390430 173390445 MEF2A JASPAR yes 67925454
chr5 173390430 173390445 MEF2A JASPAR yes 70767675
chr5 173390431 173390446 MEF2C JASPAR yes 67925455
chr5 173390431 173390446 MEF2C JASPAR yes 70767676
chr5 173390433 173390448 STAT1 JASPAR yes 67925456
chr5 173390433 173390448 STAT1 JASPAR yes 70767677
chr5 173390434 173390438 YY1 TRANSFAC yes 67925457
chr5 173390434 173390438 YY1 TRANSFAC yes 70767678
chr5 173390435 173390446 STAT3 JASPAR yes 67925458
chr5 173390435 173390446 STAT3 JASPAR yes 70767679
chr5 173390451 173390457 LEF1 TRANSFAC yes 67925459
chr5 173390451 173390457 TCF4 TRANSFAC yes 67925460
chr5 173390451 173390457 LEF1 TRANSFAC yes 70767680
chr5 173390451 173390457 TCF4 TRANSFAC yes 70767681
chr5 173390463 173390478 SOX21 JASPAR yes 67925461
chr5 173390463 173390478 SOX21 JASPAR yes 70767682
chr5 173390465 173390483 ESR2 JASPAR yes 67925462
chr5 173390465 173390483 ESR2 JASPAR yes 70767683
chr5 173390470 173390483 DUXA JASPAR yes 67925463
chr5 173390470 173390483 DUXA JASPAR yes 70767684
chr5 173390475 173390486 NFE2L2 JASPAR yes 67925464
chr5 173390475 173390486 NFE2L2 JASPAR yes 70767685
chr5 173390476 173390488 PBX1 JASPAR yes 67925465
chr5 173390476 173390488 PBX1 JASPAR yes 70767686
chr5 173390484 173390500 E2F2 JASPAR yes 67925466
chr5 173390484 173390500 E2F2 JASPAR yes 70767687
chr5 173390489 173390501 YY1 JASPAR yes 67925467
chr5 173390489 173390501 YY1 JASPAR yes 70767688
chr5 173390494 173390498 YY1 TRANSFAC yes 67925468
chr5 173390494 173390498 YY1 TRANSFAC yes 70767689
chr5 173390508 173390512 YY1 TRANSFAC yes 67925469
chr5 173390508 173390512 YY1 TRANSFAC yes 70767690
chr5 173390512 173390533 ZNF263 JASPAR yes 67925470
chr5 173390512 173390533 ZNF263 JASPAR yes 70767691
chr5 173390521 173390541 TBX19 JASPAR yes 67925471
chr5 173390521 173390541 TBX19 JASPAR yes 70767692
chr5 173390523 173390531 TBX15 JASPAR yes 67925472
chr5 173390523 173390531 TBX15 JASPAR yes 70767693
chr5 173390523 173390539 T JASPAR yes 67925473
chr5 173390523 173390539 T JASPAR yes 70767694
SNP sites on vista50251[chr5:173390340-173390538]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 173390355 rs10056562 C G
NR3C1
8714763
chr5 173390380 rs560254100 C A
NR3C1
8714764
chr5 173390382 rs6875935 C T
NR3C1
8714765
Genes possibly regulated by vista50251[chr5:173390340-173390538]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 173315283 173388979 + CPEB4 ENSG00000113742.8 173315283 0.72 0.97 5994 24943
chr5 173400782 173433143 + C5orf47 ENSG00000185056.9 173400782 0.91 1.0 5995 89756
chr5 173472607 173670504 + NSG2 ENSG00000170091.6 173472607 0.94 1.0 5996 17931
Expression level of Genes
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miRNAs possibly regulated by vista50251[chr5:173390340-173390538]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results