EnhancerDB
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  3. vista50257[chr5:173738914-173739193]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50257[chr5:173738914-173739193]
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Tissue distribution of vista50257
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Transcription factor that possibly regulate vista50257[chr5:173738914-173739193]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 173738986 173739535 CTCF UCSC Txn Factor no Conserved 108537660
chr5 173738989 173739316 REST UCSC Txn Factor no Conserved 108537661
chr5 173739007 173739308 SMC3 UCSC Txn Factor no Conserved 108537662
chr5 173739013 173739295 RAD21 UCSC Txn Factor no Conserved 108537663
chr5 173738911 173738916 ETS2 TRANSFAC yes 67939926
chr5 173738911 173738916 ETS2 TRANSFAC yes 70768018
chr5 173738911 173738919 EHF JASPAR yes 67939927
chr5 173738911 173738919 EHF JASPAR yes 70768019
chr5 173738925 173738929 LFA1 TRANSFAC yes 67939928
chr5 173738925 173738929 LFA1 TRANSFAC yes 70768020
chr5 173738979 173739000 ZNF263 JASPAR yes 67939929
chr5 173738979 173739000 ZNF263 JASPAR yes 70768021
chr5 173738981 173738992 E2F6 JASPAR yes 67939930
chr5 173738981 173738992 E2F6 JASPAR yes 70768022
chr5 173738985 173738990 ETS2 TRANSFAC yes 67939931
chr5 173738985 173738990 ETS2 TRANSFAC yes 70768023
chr5 173738993 173739004 E2F1 JASPAR yes 67939932
chr5 173738993 173739004 E2F1 JASPAR yes 70768024
chr5 173739028 173739039 NRF1 JASPAR yes 67939933
chr5 173739028 173739039 NRF1 JASPAR yes 70768025
chr5 173739031 173739039 SP1 TRANSFAC yes 67939934
chr5 173739031 173739039 WT1 TRANSFAC yes 67939935
chr5 173739031 173739039 SP1 TRANSFAC yes 70768026
chr5 173739031 173739039 WT1 TRANSFAC yes 70768027
chr5 173739031 173739042 NRF1 JASPAR yes 67939936
chr5 173739031 173739042 NRF1 JASPAR yes 70768028
chr5 173739040 173739054 PLAG1 JASPAR yes 67939937
chr5 173739040 173739054 PLAG1 JASPAR yes 70768029
chr5 173739049 173739063 PLAG1 JASPAR yes 67939938
chr5 173739049 173739063 PLAG1 JASPAR yes 70768030
chr5 173739050 173739055 SP1 TRANSFAC yes 67939939
chr5 173739050 173739055 SP1 TRANSFAC yes 70768031
chr5 173739058 173739071 NFKB1 JASPAR yes 67939940
chr5 173739058 173739071 NFKB1 JASPAR yes 70768032
chr5 173739074 173739078 LFA1 TRANSFAC yes 67939941
chr5 173739074 173739078 LFA1 TRANSFAC yes 70768033
chr5 173739074 173739086 NHLH1 JASPAR yes 67939942
chr5 173739074 173739086 NHLH1 JASPAR yes 70768034
chr5 173739075 173739085 NHLH1 JASPAR yes 67939943
chr5 173739075 173739085 NHLH1 JASPAR yes 70768035
chr5 173739109 173739115 SOX10 JASPAR yes 67939944
chr5 173739109 173739115 SOX10 JASPAR yes 70768036
chr5 173739113 173739118 SP1 TRANSFAC yes 67939945
chr5 173739113 173739118 SP1 TRANSFAC yes 70768037
chr5 173739144 173739163 CTCF JASPAR yes 67939946
chr5 173739144 173739163 CTCF JASPAR yes 70768038
chr5 173739146 173739152 NFE2 TRANSFAC yes 67939947
chr5 173739146 173739152 NFE2 TRANSFAC yes 70768039
chr5 173739147 173739162 ZIC4 JASPAR yes 67939948
chr5 173739147 173739162 ZIC4 JASPAR yes 70768040
chr5 173739153 173739168 RFX5 JASPAR yes 67939949
chr5 173739153 173739168 RFX5 JASPAR yes 70768041
chr5 173739188 173739194 LEF1 TRANSFAC yes 67939950
chr5 173739188 173739194 SOX10 JASPAR yes 67939951
chr5 173739188 173739194 LEF1 TRANSFAC yes 70768042
chr5 173739188 173739194 SOX10 JASPAR yes 70768043
SNP sites on vista50257[chr5:173738914-173739193]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 173738919 rs554755405 G C
EHF
8716457
chr5 173739029 rs199720429 CGCGCGGGG C
CTCF NRF1 RAD21 REST SMC3
8716458
chr5 173739065 rs2936922 A G
CTCF NFKB1 RAD21 REST SMC3
8716459
chr5 173739091 rs574007241 C G
CTCF RAD21 REST SMC3
8716460
chr5 173739115 rs2913518 G A
CTCF RAD21 REST SMC3 SOX10 SP1
8716461
Genes possibly regulated by vista50257[chr5:173738914-173739193]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista50257[chr5:173738914-173739193]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results